Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01552 ATGCGTTGCATCAACTTCAAAGCCCTTGATCAAGATGACATTGTGATATCCAAGCCATTTCATGGTAGTCGTTTGTTCCAAACTATAAAGCTTCTTCCTGAGTTTGGTGGTGCTTGGCAAAACAATTCTGCTAAGGCTAAGAGAGAAAGTACTAAACGGAAGACTTGTAAGGATTCAAGTTTGTCAAAATACAAGTATCCTCTGCTGGACAGATCACAGGTGTCTCCAACTGATGAATACACATTTCAAAGTGCTGAACACATTTGGATGGGAAAACGGCAATCCAAGGCAAAACTAAGTTTTGCTCATCAGGGTGAAACACAAGAGAGTGTAGACTCATCAAGGTGTCACAAACCCTTGAGTGGTAAGAAGTTTTTGGTTGTTGAGGACTCTGAATTGTTGCGCAAGCTAACTTCTGCTACTTTGGTTTCTCTTGGTGCAACTATGGATCAATGTGAGAATGGAGAAGAAGCTGTGAGGCTAGTTGATGACGCTCTGGCTGCTCCAGATTTTCCTAATGCTCCTTATGATTACATCTTAATGGATTGTCAGATGCCAGTAATGGATGGGCTTGAGGCAACGAAGTGGATACGAAAGATAGAGAAACCATATGGTGTTCGCATTCCTATCATTGCATTGACTGCTCGCACCGAAAAACTGACTATAGAGACTGGAATAGACTTTCATATAGTGAAGCCTATTAAGAGAGACCATTTACTTGAAGCCATCAGATATATACATGATAAAGCACACAAGCGTGACACAATGTAG 771 0.4125 MRCINFKALDQDDIVISKPFHGSRLFQTIKLLPEFGGAWQNNSAKAKRESTKRKTCKDSSLSKYKYPLLDRSQVSPTDEYTFQSAEHIWMGKRQSKAKLSFAHQGETQESVDSSRCHKPLSGKKFLVVEDSELLRKLTSATLVSLGATMDQCENGEEAVRLVDDALAAPDFPNAPYDYILMDCQMPVMDGLEATKWIRKIEKPYGVRIPIIALTARTEKLTIETGIDFHIVKPIKRDHLLEAIRYIHDKAHKRDTM 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01552 256 ProSiteProfiles Response regulatory domain profile. 124 247 IPR001789 GO:0000160
Pste4g01552 256 SUPERFAMILY CheY-like 120 247 IPR011006 -
Pste4g01552 256 Gene3D - 100 255 - -
Pste4g01552 256 SMART REC_2 123 243 IPR001789 GO:0000160
Pste4g01552 256 Pfam Response regulator receiver domain 126 244 IPR001789 GO:0000160
Pste4g01552 256 PANTHER TWO-COMPONENT HISTIDINE KINASE 6 244 - -
Pste4g01552 256 CDD REC_hyHK_CKI1_RcsC-like 125 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01552 Pste-Chr4 11663141 11663997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01552 10 251 Histidine Kinase Gene Family AT2G47430 34.100 1.42e-35 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste4g01552 Response_reg 1.9e-18 CL0304