Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01543 ATATCAGAGTGTTTCCTAGGCTTTGCTCCTCTCTTCTCCTCTCCTCTTCCTTCAGCAAACCTCACACTGTCGTGTTTCGCTCCAATCTTCTGTGCCATTTTTTTTTTCGTTTGCAACGGTTATCTCTTCTTTTATTATTCAACAATACTTTCGGTTACCGTAATTCTTTTTATTACAAAGATGACCTTCGGTTTTTTCGATAAGTCCAAGGGCAGGCCATGGAAAGTGTATTCAAGAACTGTGTACATGCAGTCATATTGGAGATGTAGTTCAATCTGCTGGATGGGCTTGAAAAATTCTCTTGCCTCTGGTGCTGACAAGGATGAAGAAGAAGATTTAGAGGGAAGAACTGCTTTACATTTTGCTTGTGAATATGGCGAGGTGAAATGTGCTCAAATTCTCCTTGAGACTGGAGCAAAAGTGGATGCTTTGGATAAGAATAAGAACACAACTCTCCATTATGCAGATGATTATGGCAGAAAGAACTGTGTGGCCCTTCTACTTGAAAATGGTGGTGCAGATCCAAAGGAATTGGCTGAACAGATAGCGAAAGATCCATCATTCAATCATATGGCTGAGCAGCTTCAGAAAACTTTTCAAAGAGCTTCAAAGGATGGTATCCCTAGCTTTGATAATCAACAATATTTTTCAACCATACAACAGTACCGGAATGATGAGGAGGTTTTGTGGAAGTTGGGACAAGCCATGGATCTTGCAAATTCTAGAGAGGTAGGTGCCTCTGCCGAAAATCCAAGGGGAGACGACACAGAAGATTTGGGAAATAAAGATGAATCAATTGTTCATCATACTGCTAGTGTTGGTGACTTGGAGATGACTCTTTGTAAGATTGATGTTGCACCTAACTTGGTTGAAGATCAAGTCAACTATAACTTACTTGGGCAAGCCATGGAAAATGGCACCGATGGGTTGAACACCCTCTTTTATAGTGAGTTTGATAACTTTAGACCTGGTTCATTAGATGTGATATGTAACTATCATTTTTCTAACTTTAGACCTGGTCATGTGATGAATGTTTGGATACATGAAATTCAAAATTTGATATCT 1065 0.3962 ISECFLGFAPLFSSPLPSANLTLSCFAPIFCAIFFFVCNGYLFFYYSTILSVTVILFITKMTFGFFDKSKGRPWKVYSRTVYMQSYWRCSSICWMGLKNSLASGADKDEEEDLEGRTALHFACEYGEVKCAQILLETGAKVDALDKNKNTTLHYADDYGRKNCVALLLENGGADPKELAEQIAKDPSFNHMAEQLQKTFQRASKDGIPSFDNQQYFSTIQQYRNDEEVLWKLGQAMDLANSREVGASAENPRGDDTEDLGNKDESIVHHTASVGDLEMTLCKIDVAPNLVEDQVNYNLLGQAMENGTDGLNTLFYSEFDNFRPGSLDVICNYHFSNFRPGHVMNVWIHEIQNLIS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01543 355 SUPERFAMILY Ankyrin repeat 90 177 IPR036770 -
Pste4g01543 355 MobiDBLite consensus disorder prediction 248 264 - -
Pste4g01543 355 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 101 172 - -
Pste4g01543 355 Pfam Ankyrin repeats (3 copies) 101 176 IPR002110 GO:0005515
Pste4g01543 355 Gene3D - 94 207 IPR036770 -
Pste4g01543 355 ProSiteProfiles Ankyrin repeat region circular profile. 114 146 - -
Pste4g01543 355 SMART ANK_2a 114 143 IPR002110 GO:0005515
Pste4g01543 355 SMART ANK_2a 147 177 IPR002110 GO:0005515
Pste4g01543 355 MobiDBLite consensus disorder prediction 242 264 - -
Pste4g01543 355 ProSiteProfiles Ankyrin repeat profile. 114 146 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01543 Pste-Chr4 11579724 11586442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01543 97 323 Ion Channels AT2G25600 25.328 3.35e-07 50.4