Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01536 TTACACACAAACACAAACACAAACACAAACGAGAGTGAGTGAGTGAGTGAGTGAGTGAGTGTGTGCGTTCTTCTTCCTCCTTTCATCGACTCCCCCAATACAGCACGGCACAGCATCCATGGTCTCCAAACCCACCGACTCGGCTTCCAAACCTCGAAAGCAACATGGAGACCCTGCAAATGATGTTATTGGAAGCTTGTCCCTCAACATAAATCAGTTGAAAAAGCAAATCCAGGCCGAGAGAATTGTATACATTAAAGAAAAAATTCAGAACAATGAGAAGAAGCTACAATGTCATATGTCAGGAGTTTTGTCAGCAGTATCAGCAAGGGGTTCTTCACAGACACAAGAAAATAGGAAAACTCCAATTCTTTCTTCAAGAATTGACCATCCTTTATTTAAATTCAGTGGTTTCTCTCCAGTCTCAGGAGACAAAGACTACAGCAATCAAGATGTATTATCTGCTACAAGTATAAAAATTCCATATATTGACAGATTACCGCCATATACCTCCTGGATATTTCTAGACAGAAATCAGAGAATGGCTGAAGATCAGTCAGTGGTTGGAAGAAGACGTATCTACTATGATCAACATGGAAGTGAAGCATTGATATGCAGTGACAGTGAGGAAGAGTTAACAGAACCTGAGGAAGAAAAACATGAATTTTCTGAGGCTGAAGACCGAATTATATGGATGGCATTTGAGGAATATGGGTTAAACGAAGAGGTATTGAACGTTGTTAGTGAATTTGTTGGGGGAACCAGTTTCGAAATTCAGGAGAGGTACAAACATATGAAGGAAAAGAACAATAGTAGGTTGGGCCAGTCTTCGGAAAACTCAGGAGAATATGAATCTACTATTAGCATATGTCCAGAGAAAAGCCTGAGTGCTGCATTAGATTCTTTTGATAATCTTTTTTGTCGCCGGTGCCTGCAGATTTTTGACTGTCGTCTGCATGGCTGTTCTCAACCTTTAGTATATCCTAGTGAAAAGCAGACAGTTTGGTCTGATCCTGAAACGGACAGGAAACCGTGCAGTGATCAGTGTTACCTTCAGCAGTTAAAAGTACTAAAGAATCTGTCAGAAGTTTCAACTTCTGGGTCTGATCAGAATAAGAGAACTACAATTACAGAAGAGGCAGATGTATTGGCACCATCCACTATAGAGGAACCTAGTAATCTGAGTACAGCCCCTTTTCCAACAGAAGTTAATTGTCATGAATCTCTAAATTTAAATGTTCCTATATCAGTGAATGTGGAAAAACGGAAAGTCTCAAATCTGTTAGACACAGCAGTCTGTGACTCAATGCTCCCTCCTAACGATGCTCAGAATTCTTGTAAAAAGCTGAAGACAATCTCAGATGATATAGTTACTGTAAATAGTGATTCTAGCAAGAACATAAATTTGGGTGCATGTGATGAAAGTAAACATATAACTACTGCTGCAATTTTGGACAAATCTGTTAAACATAATTCAAATAAATTAATAGATTCTTCTAGCACTTTCCATAGTGAGGAGCAGGACAAAAGTATTGGTGATGACCCAAAAGAACTTACAAATAAGACAGAATTTAAGAAGTTGTCCAATTCAACGGAAGGGAAAGTTGATGGGATGCTAAGTCTCTCGGATTGGAAACCTCTGGAAAAAGAATTATACTTAAAGGGAGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCAAGGAACTTGCTTTCTGGATTGAAGACTTGCATGGAAATAGCTAGTTGCATGCATTCTGGAGGAGTTTCAATGGCCCATGGATCTAGTGTTACACCTAGTTCAATCACGGAAGACAAGGGAAAATTTGATGCAGAGTGCACAGACCAGGAAATGCCATCTAGATCACGGCTGCTGAGGAAAAGGGGCAAAACAAGGAAGTTTAAATATTCATGGAAATCTGCTGGTCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACACCTTGTGGATGTCAGTCAATGTGTGGAAAGGAATGTACATGCGTTAATGGCGGAACTTGTTGTGAAAAATATTGCGGTTGTTCAAAAAGTTGCAAAAATCGGTTCAGAGGATGCCATTGTGCCAAGAGTCAGTGTCGAAGTCGACAATGCCCATGCTTTGCTGCTGGACGGGAATGTGACCCGGATGTCTGTCGGAATTGCTGGGTTAGTTGTGGGGGTGGTTCATTTGGGGAACCACCTAGGCGTGGAGAAGCTCAATGTGGGAATATGAGGCTTCTTTTAAGGCAACAACAAAGGATTCTCTTGGCAAAGTCTGATGTTGCAGGATGGGGAGCCTTCTTGAAGAACCCAGTTAACAAGAATGATTACCTGGGAGAATACACAGGAGAACTGATCTCCCATCGAGAAGCTGATAAGCGTGGGAAAATATATGATCGTGCCAACTCGTCTTTCCTTTTTGACTTGAATGATCAGGCAAGTATTTTATACTTTTTCCTATCATGTGTCTTCTCTATCTGTAACTCTTATCTCAATGGTTTGAGTTGCCTTGTGATTTATAAGAGGTTGAGTCATATTTTGTACGTTCTTGATGCTTATCGCAAAGGAGACAAGTTAAAATTTGCAAACCACTCGTCAAATCCCAACTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGTATATTTGCCAAGGAACACATCGATGCTAGTGAAGAGCTCTTTTATGATTATCGTTATGGTCCTGATCAAGCACCACCGTGGGCACGTAAACCTGAGGGTTCCAAGAGAGACGAATCAACAGCTCCTCAAGGCAGAGCTAAGAAACACCAGTCTCATTGATGAGCCTGTGTGGACCGAGATCAAGAACATACAAATTTTTTGTTTCTACTACTACTATACGTAGACCAATTTGTGACATCCCACGGAATAGATTCAAGATCAACTGTCACAGAAGGTATTTAATAACTGGTCTGCTGATACTAATACGCCTTTAAATTATGGATATGACACAGCTAAGCAATAAAATGGGCAAGGGATGAAGCATGAGGCAACTTAATGCAAAGGGAAAGAAGCTAGAAACTAGCCTAGCAGTTGGGAACAAAAGTAATAGAATTTTGTTTTGGATGCTAGGCACGACATTTCGGCGAACTTGTTCTTCAGACTTGGTTTTGCTCTTCATTATATGAGCCATCCAAGTTATTAATAAATATTATTAATAAATATAATAAAGTGCTATGACATGCGGAATGAAAAGGAAATTTAAGATTTTAAGCGTGTTAGATGTGAATTAGTGTATATATTTGTATCAGTTTTAAATTTGACGGCGGAGAAGCAAGAGATGAATTGTTTTGGAATTTTAAAATGTGTATTTCACACGTTAAATGTAACATAGCCTTATTGGTGACGTCAATCACAAATGACAACCAGTTCTG 3429 0.3984 MVSKPTDSASKPRKQHGDPANDVIGSLSLNINQLKKQIQAERIVYIKEKIQNNEKKLQCHMSGVLSAVSARGSSQTQENRKTPILSSRIDHPLFKFSGFSPVSGDKDYSNQDVLSATSIKIPYIDRLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEPEEEKHEFSEAEDRIIWMAFEEYGLNEEVLNVVSEFVGGTSFEIQERYKHMKEKNNSRLGQSSENSGEYESTISICPEKSLSAALDSFDNLFCRRCLQIFDCRLHGCSQPLVYPSEKQTVWSDPETDRKPCSDQCYLQQLKVLKNLSEVSTSGSDQNKRTTITEEADVLAPSTIEEPSNLSTAPFPTEVNCHESLNLNVPISVNVEKRKVSNLLDTAVCDSMLPPNDAQNSCKKLKTISDDIVTVNSDSSKNINLGACDESKHITTAAILDKSVKHNSNKLIDSSSTFHSEEQDKSIGDDPKELTNKTEFKKLSNSTEGKVDGMLSLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEIASCMHSGGVSMAHGSSVTPSSITEDKGKFDAECTDQEMPSRSRLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKECTCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGGGSFGEPPRRGEAQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQASILYFFLSCVFSICNSYLNGLSCLVIYKRLSHILYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDESTAPQGRAKKHQSH 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01536 905 CDD SET_EZH 721 872 - -
Pste4g01536 905 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 905 IPR025778 GO:0031519
Pste4g01536 905 MobiDBLite consensus disorder prediction 882 898 - -
Pste4g01536 905 ProSiteProfiles SET domain profile. 721 871 IPR001214 GO:0005515
Pste4g01536 905 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 27 782 IPR045318 GO:0006338|GO:0042054
Pste4g01536 905 SMART set_7 721 877 IPR001214 GO:0005515
Pste4g01536 905 MobiDBLite consensus disorder prediction 326 358 - -
Pste4g01536 905 MobiDBLite consensus disorder prediction 462 486 - -
Pste4g01536 905 Pfam SET domain 732 870 IPR001214 GO:0005515
Pste4g01536 905 SMART CXC_2 656 693 IPR033467 -
Pste4g01536 905 Pfam CXC domain 660 691 IPR041355 -
Pste4g01536 905 ProSiteProfiles CXC domain profile. 608 707 IPR026489 -
Pste4g01536 905 MobiDBLite consensus disorder prediction 1 23 - -
Pste4g01536 905 SUPERFAMILY SET domain 622 874 IPR046341 -
Pste4g01536 905 Gene3D SET domain 622 873 IPR046341 -
Pste4g01536 905 MobiDBLite consensus disorder prediction 459 486 - -
Pste4g01536 905 MobiDBLite consensus disorder prediction 876 905 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01536 Pste-Chr4 11507556 11521531 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01536 710 874 C2H2 Transcription Factor Family AT2G23740 23.077 1.71e-07 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste4g01536 SET 1e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01536 4 11507556 11521531 Pste4g01536 4 11507556 11521531 ECH