Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01535 ATGGGAAGTGATCCTTTTTCTTCCGCACCTTTCAATTTCAACGAATTCCAGGGCGGTTATGGCTCTATACAAGGAAAGGATGTTGTACTTCAAGGGGAACACGGTTTCTCTGCTATAATGAAGTTACTGAGAGAGATAAATACTCCTCCTACTTCTGAAGACCAAAACCAAAAGCAGCAACATGATTTCAATTTTGATCACTTGATGTTAGAGGAGTTCACCTTTGAACCCATTCAGCAACTGAAACAGTCTTTTCAAGAAACAAAGGGACCAAAGAATAAACAGGTAGTGCCATCTTCTTTAGCCTCGTTGGAGCTCCTGAGCAATTATGGAAGCAGGTTCAAGAGGCAGGGGAAGCAAAACATCAGCGATGGTGTTGACACATATGTGAGTCCTCAGAAGTTGTCAACTGAAGAAATAATAAGATTGGCTGGAGCAAGGTATATTCAGCACTCTACACAATGGCATGATGATGCTTTTATCCCCATGCACCCTTATGGATTTGGTCTTGGAGTTTTATCCGAGGAAGAACATAGAGATGTGGAACTTGCTCAGTTTCTTCTGGCAGCAGCTGAGAGGGTAGGGTTCCAACAATTTGAACGTGCCAGCATGCTACTTTCCCATCTTTCTTCAGGTGCTGGTGGAAGCCCCGTTCAGAGAGTTGTTTTTCATTTTGCTCGAGCACTCGGAGAGAGAATCACAAAAGAAACAGGGGAGAGAATAAACGGGTGTGAAAGAAACAAGGAAAAGGAAATGATTGAGAAGTTAAGATCGGATACTAACATGGCTCTTACATGCCATCAAAAAATTCCTTTCAATCAAGTAATGCAGTTTGCTGGGGTGCAAGCTATTGTGGAACATGTTGCATCTGAAACCAAAATCCATCTGATAAATCTTGACATTGGATGCGGGGTGCAATGCACAGCTTTGATGCAAGCACTGGCTGAGAGACATGAATATCAAGTTCAGCTTTTGAAGATAACTGCCATTGGAATTCAAGGCAAGACCAAGGTACAAGAGACAGGGAAAAGATTAGTGAGTTTTGCTGAATCCTTAAACTTGCCCTTTTTATATAAGGTAGTTTTTGTGACAAGCATGATAGAGATCAAGGTAGAGCAATTTGAAATTGAAGGAGATGAAGCTGTAGCTATATATTCTCCATATATACTGAGGACTATGGTGTCGGATTCTGACTCCTTGGAACAATTGATGCGGGTGATGAGAAAAACCAGACCAAGCGTAATGATAGTTCTTGAGTTGGAAGCAAAACATAACTCACCCTCATTTGTGAATCGCTTCATTGAGGCATTGTTCTTCTATGCTGCATATTTTGACTGCATTGAAACATGCATGAAGGAGGATTATGAGTGCAGAATAAGAATAGAGGGAATATTATCTGAAGGGATACGAAACATCGTTGCGACGGAAGATGGAGAAAGAACGGTTAGGAATGTGAAGATAGATGTTTGGAGAAGGTTCTTTGCAAGGTATAAAATGAAGGAGACTACATTTAGCGAGTCATCTTTGTACCAAGCTAACCTGGTTGCCAAAAAGTTTGCGTGTGGGAATTTCTGTACTGTAGACAAAAACGGGAAGTGTCTAATAGTTGGATGGAAAGGGACCCCAATTCATTCAATCTCAGCTTGGAAGTTTCTTTGA 1659 0.4123 MGSDPFSSAPFNFNEFQGGYGSIQGKDVVLQGEHGFSAIMKLLREINTPPTSEDQNQKQQHDFNFDHLMLEEFTFEPIQQLKQSFQETKGPKNKQVVPSSLASLELLSNYGSRFKRQGKQNISDGVDTYVSPQKLSTEEIIRLAGARYIQHSTQWHDDAFIPMHPYGFGLGVLSEEEHRDVELAQFLLAAAERVGFQQFERASMLLSHLSSGAGGSPVQRVVFHFARALGERITKETGERINGCERNKEKEMIEKLRSDTNMALTCHQKIPFNQVMQFAGVQAIVEHVASETKIHLINLDIGCGVQCTALMQALAERHEYQVQLLKITAIGIQGKTKVQETGKRLVSFAESLNLPFLYKVVFVTSMIEIKVEQFEIEGDEAVAIYSPYILRTMVSDSDSLEQLMRVMRKTRPSVMIVLELEAKHNSPSFVNRFIEALFFYAAYFDCIETCMKEDYECRIRIEGILSEGIRNIVATEDGERTVRNVKIDVWRRFFARYKMKETTFSESSLYQANLVAKKFACGNFCTVDKNGKCLIVGWKGTPIHSISAWKFL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01535 552 ProSiteProfiles GRAS family profile. 174 550 IPR005202 -
Pste4g01535 552 Pfam GRAS domain family 184 550 IPR005202 -
Pste4g01535 552 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 134 540 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01535 Pste-Chr4 11497191 11498849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01535 172 551 GRAS Transcription Factor Family AT3G03450 28.165 2.72e-46 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste4g01535 GRAS 4.4e-77 CL0063