Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste4g01524 | TTCATTGGTTGGAAGGGCCGCAAAAGCAAGGCACAAGCTTCCACTGGGACCATCCCCTTTTCCCATCATTGGGGTGAGAAGCCCCACAAGACATTGGCAAACCTTGCTAAGATTCATGGCCCAATAATAAGCCTAAAGTTGGGACAAATAACCATTGTTGTTGTGTCTTCTACCCAAATGGCCGAGGAGGTCCTTCTAACCAATGACCACTATTTCTCAAACCGAACCATTCCCCATCTATGTGGATTATCCAATTTGGTCATTGAAAACGCTAAAAAACACACCAGAACAGTGCCGCCACATCTAGAGGTTGAAGATGAACACTTTTTCAAAGCCCACTCGTGGCCTGGGCACGTAGGGTCAGCTTCACCAACTACTTTGGGAAAGGAAATGGCGATATTTGCTGTGAGATTAAGCAGAGAAAGGCAGGAACTGTCTCAGGTTGAGATATTGGGGAAATTTGGTGGTGCAGTTGGAAATTACAATGCACATGTTGTTGCATATCCTGAAGTTAACTGGCCTCACATTGCAGAACAGTTTGTTCAATCTCTTGGATTAAATTTTAATCCTTACATTGCTCGGTTCAATAATATATTGATTGACTTTGATAGAGATCTATGGGGCTATATATCTTTGGGTTACTTTAAGCAGATCAGTAAGGCCGGGGAGATTGGGTCATCAACTATGCCTCACAAAAGGGACCTGACAGATTCAACTGTCTTAAGGAACACGGGGGTGGGTATAGGTGATTCTCTTCTTGCCCACAAAAGCACACTTCAAGGAATAGGGAAGCTTCAGGTTATGCGAAGATATGGTGTTCCTGAGCCTTATGAGAAGTTAAAAGAACTAACCAGAGGGAGAGCAGTTACCAAAGAGAACATAAGAGACTTCATTGAAAGCTTAGATATTCCAGAAGAAGCAAAGATGAATCTGTTAAAGTTAACACCTGATACTTATGTCGGAGCAGCTGCTGAATTGGCCAGAACAGTGGAAAATGCCGTGAATGCTGAAACAAACAAGTGGTTGAAGCAGTTTTCTCCAGAAGTATTGGCCAGGCAATCCTCACCATCATTAGACCAAATGGCCAATATGTACGACTTTGACCTGTGGAGGTCTGGTGTTTCTGAGCTGAGGTCATGTATAAATTGCGTTCCCCAGCAATGCAGATGCATCCAGCAAACAACGTTTCCTATCTTTCCTTCGCCATTACAATTCACTTGCATCTCGTTATATACGGTAATGGACATGGCAAGTTGTGCGCTGCTAATTGTCTTGACATGCGCCATGCTTCATGTTTTTCTTGGTTCATTCCTTGCAAGGCCCACAAAAGCAAAGCACAAGCTTCCACCGGGACCATCCCCTTTTCCCATCATTGGGAACCTACTTGAATTGGGTGAAAAGCCTCACAAGTCTTTGGCAAAGCTTGCTAAGATTCATGGCCCAATAATGAGCCTAAAACTGGGAAAAATAACCACTGTTGTTGTGTCTTCAGCACAAATGGCCAAGGAAGTCCTCCTAACCAATGACCACTTGTTGTCAAACCGAACCATTCCCCAATCTGTGTCAGTTCTCAATCATGAACAATTCAGCCTTGCCTTTATGCCCATTTCACCTCTTTGGCGGGAACTCAGAAAAATATGCAACACTCAATTATTTGCCCACAAGACTCTTAATTCTAGCCAAGAAGTTAGGCGTAAGACAGTGCAACAACTTGTCACCGATATCTACCAATGCAGCCGGATAGGTGAAGCAGTGGATATTGGAACAGCAGCATTCAAGACTACCATAAATCTTTTATCAAACACTATTTTCTCTACGGATTTGATTCACTCTACAGGTAAAGCAGAAGAGTTCAAGGACTTGGTGACCGATATTACAAAACTGGTAGGAACACCAAACTTGGCAGATTATTTTCCAGTGCTGAAGATGGTTGATCCAAAGGGCGTTAAAAAACAGCAGAGTAAGAACGTGGAAAAGATGTTAGTCATGTTTGAGGGCTTGGTTAACCAACGATTGAAGCAGAGAGAGGAAGGGAAAGTCCACAATGACATGTTAGATGCCATGCTCAATATTTCAAAAGACAACGAGTACATGGACAAGAATATGATTGAACATCTCTCACATGATATATTTGTTGCGGGAACAGATACAACAGCATCCACCCTTGAATGGGCAATGACCGAGTTAGTCTGCAACCCAGAGGTAATGTCAAAAGCGAAACAAGAGCTTGAGCAAATGACTAGTAAGGGTAATCCTATTGAGGAAGAAGATATTAGTAAGCTGGCATACTTGGGAGCAGTAGTAAAAGAGACATTACGGCTGCACCCGCCAGTCCCATTTTTACTGCCACGAAAAGCTGATAGGGATGTGGAAATTGGTGACTACACTATCCCAAAAGATGCACAAGTGTTGGTTAATATGTGGACTATTTGCAGAGACCCTACATTATGGGAAAATCCAACTCTGTTTTGGCCAGACAGGTTCCTAGGATCTGATATCGATGTGAAGGGAAGAAATTTTGAGCTTGCACCATTTGGTGCTGGGCGTCGTATATGCCCCGGTATGCTATTGGCCAATAGGATGTTACTGTTAATGTTGAGCTCGCTTATAAACTCCTTTGATTGGAAGCTTGAGCAAACACATGATATTGACATGGATGATAAATTTGGGATTACCTTGCAAAAAGCTCAGCCCCTACGAATTGTTCCTCTTCCTCTCAAAATAAACCAT | 2730 | 0.4293 | FIGWKGRKSKAQASTGTIPFSHHWGEKPHKTLANLAKIHGPIISLKLGQITIVVVSSTQMAEEVLLTNDHYFSNRTIPHLCGLSNLVIENAKKHTRTVPPHLEVEDEHFFKAHSWPGHVGSASPTTLGKEMAIFAVRLSRERQELSQVEILGKFGGAVGNYNAHVVAYPEVNWPHIAEQFVQSLGLNFNPYIARFNNILIDFDRDLWGYISLGYFKQISKAGEIGSSTMPHKRDLTDSTVLRNTGVGIGDSLLAHKSTLQGIGKLQVMRRYGVPEPYEKLKELTRGRAVTKENIRDFIESLDIPEEAKMNLLKLTPDTYVGAAAELARTVENAVNAETNKWLKQFSPEVLARQSSPSLDQMANMYDFDLWRSGVSELRSCINCVPQQCRCIQQTTFPIFPSPLQFTCISLYTVMDMASCALLIVLTCAMLHVFLGSFLARPTKAKHKLPPGPSPFPIIGNLLELGEKPHKSLAKLAKIHGPIMSLKLGKITTVVVSSAQMAKEVLLTNDHLLSNRTIPQSVSVLNHEQFSLAFMPISPLWRELRKICNTQLFAHKTLNSSQEVRRKTVQQLVTDIYQCSRIGEAVDIGTAAFKTTINLLSNTIFSTDLIHSTGKAEEFKDLVTDITKLVGTPNLADYFPVLKMVDPKGVKKQQSKNVEKMLVMFEGLVNQRLKQREEGKVHNDMLDAMLNISKDNEYMDKNMIEHLSHDIFVAGTDTTASTLEWAMTELVCNPEVMSKAKQELEQMTSKGNPIEEEDISKLAYLGAVVKETLRLHPPVPFLLPRKADRDVEIGDYTIPKDAQVLVNMWTICRDPTLWENPTLFWPDRFLGSDIDVKGRNFELAPFGAGRRICPGMLLANRMLLLMLSSLINSFDWKLEQTHDIDMDDKFGITLQKAQPLRIVPLPLKINH | 910 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste4g01524 | 910 | Pfam | Lyase | 118 | 235 | IPR022761 | - | |
| Pste4g01524 | 910 | Gene3D | - | 269 | 320 | - | - | |
| Pste4g01524 | 910 | CDD | CYP76-like | 476 | 903 | - | - | |
| Pste4g01524 | 910 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Pste4g01524 | 910 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 845 | 854 | IPR017972 | GO:0005506|GO:0016705 | |
| Pste4g01524 | 910 | Gene3D | Fumarase/aspartase (Central domain) | 117 | 268 | - | - | |
| Pste4g01524 | 910 | SUPERFAMILY | Cytochrome P450 | 449 | 904 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g01524 | 910 | Pfam | Cytochrome P450 | 18 | 78 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g01524 | 910 | Pfam | Cytochrome P450 | 449 | 895 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g01524 | 910 | SUPERFAMILY | Cytochrome P450 | 15 | 80 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g01524 | 910 | PRINTS | P450 superfamily signature | 766 | 777 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g01524 | 910 | PRINTS | P450 superfamily signature | 713 | 730 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g01524 | 910 | PRINTS | P450 superfamily signature | 843 | 852 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g01524 | 910 | FunFam | Cytochrome P450 76C4 | 440 | 902 | - | - | |
| Pste4g01524 | 910 | PRINTS | E-class P450 group I signature | 842 | 852 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g01524 | 910 | PRINTS | E-class P450 group I signature | 702 | 719 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g01524 | 910 | PRINTS | E-class P450 group I signature | 722 | 748 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g01524 | 910 | PRINTS | E-class P450 group I signature | 806 | 830 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g01524 | 910 | PRINTS | E-class P450 group I signature | 476 | 495 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g01524 | 910 | PRINTS | E-class P450 group I signature | 500 | 521 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g01524 | 910 | PRINTS | E-class P450 group I signature | 765 | 783 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g01524 | 910 | PRINTS | E-class P450 group I signature | 852 | 875 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g01524 | 910 | Gene3D | Cytochrome P450 | 439 | 903 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g01524 | 910 | PANTHER | CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED | 427 | 904 | - | - | |
| Pste4g01524 | 910 | Gene3D | Cytochrome P450 | 5 | 104 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g01524 | 910 | Pfam | Adenylosuccinate lyase C-terminal | 232 | 267 | IPR013539 | GO:0004018|GO:0006188 | |
| Pste4g01524 | 910 | Pfam | Adenylosuccinate lyase C-terminal | 267 | 320 | IPR013539 | GO:0004018|GO:0006188 | |
| Pste4g01524 | 910 | SUPERFAMILY | L-aspartase-like | 118 | 334 | IPR008948 | GO:0003824 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste4g01524 | Pste-Chr4 | 11388277 | 11400421 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste4g01524 | 414 | 904 | Cytochrome P450 | AT2G45550 | 44.752 | 1.51e-149 | 449 |