Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01519 AACACACTACCTTTCTCTCTCTCTTTCTTTCACACACAACTAAGCTATAAACCAGATCAACCCTATCTCTCTCCACTTCTTACTAGTGTGAACTTTGAGTTTGTAGTGTGCGAGAGATGAAGGATTTGAGCATTTAAGAGATCAGGTTTGTTAGCTATATGGAGAAGAAGGAGATGGCGTTGAAGACTGAGGATGCGGTTGGGTCCTCTTCCTTCCCTTGTTACATAAATTCAAACGTTTATCCATTCTCAAGCGCGTTTGATTTCTCAGAAGTGGAAAAAAGCTCTTTAGGGTTTATGGAGTTACTGGGTGTGCAGGACTACAGTCCTCTGCTTGAGTTACCTCAACTTTCAACTGCCTCTATGGAGCCTCATCACTCTACAGTTAAGGTTCCATCTGATAACGGGAAAGAGTGTTCCGAGGTGTTGAACCACCAACCTGCCACTCCAAATTCGTCTTCCATTTCATCCGCTTCCAGTGATGCAGTCAATGATGAACAGAATAAGACTCTAGACCAAGCTGATGAAGACGACGATGAAGAAGAAGGACAGCAAAAGACTAAGAAACAGTTGAAGCCCAAGAAGACAAATCAGAAGAGACAGAGAGAACCAAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAGGCCGTGAAAAATAGCCCCTTTCCCAGGAGCTACTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAACGCGTGGAGCGATCTTTCACTGATCCAAGCGTTGTAGTGACAACCTATGAAGGCCAACACACACATCCAAGCCCAGTTATGCCTCGTTCAGGTGTAAACGCTGGATACGCCACCAGCTTTGGTTCAGTTTTGCCAACGGGAAACTACTTATCCCAGTATCATCACCACCATCAACAACTCCTTGTCAACACATTGTCCTCTTTGGGTTTTCCTTACACTGATTCTTCATCTCCAAAGAATGCTGTTTTTACTCAAGAGAGACGGCTTTGTAATCCAGGGACGAATGCACTAATTCTAAGGGACCATGGACTTCTTCAAGATGTTGTTCCTTCACACATGTTGAAAGAAGAGAAGAGCTGATCATCGATATAACTTCATTACTCATGCTTCTATGTACTTTAATTTTTGCTGACTTTTTCCTATGAGACTTAGGTGAGAACTCCAGTCTTGGTACATGTAATTTTTCTTCCTGACCGGTGGTGGTGATATTAGTAGTCATGATCATATATACTTGTAAAACCCACTTTATCTTTTTGCACATAGCCCATCATTATTATTATGGATGTAACATGATGGATTATCATCTAATGCACGAATTACTCTAGTTTTAGTTATTTTGTTTCAATATTAATTTTCTTAATTACGGTATAGAGCAACTCAACTCTCC 1422 0.4156 MEKKEMALKTEDAVGSSSFPCYINSNVYPFSSAFDFSEVEKSSLGFMELLGVQDYSPLLELPQLSTASMEPHHSTVKVPSDNGKECSEVLNHQPATPNSSSISSASSDAVNDEQNKTLDQADEDDDEEEGQQKTKKQLKPKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFTDPSVVVTTYEGQHTHPSPVMPRSGVNAGYATSFGSVLPTGNYLSQYHHHHQQLLVNTLSSLGFPYTDSSSPKNAVFTQERRLCNPGTNALILRDHGLLQDVVPSHMLKEEKS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01519 318 Gene3D WRKY domain 149 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste4g01519 318 PIRSF WRKY_txn_fact_IIc 1 317 IPR017396 GO:0003700
Pste4g01519 318 MobiDBLite consensus disorder prediction 86 114 - -
Pste4g01519 318 FunFam WRKY transcription factor 57 150 224 - -
Pste4g01519 318 SUPERFAMILY WRKY DNA-binding domain 156 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste4g01519 318 Pfam WRKY DNA -binding domain 165 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste4g01519 318 SMART WRKY_cls 164 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste4g01519 318 ProSiteProfiles WRKY domain profile. 159 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste4g01519 318 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 90 251 IPR044810 GO:0003700
Pste4g01519 318 MobiDBLite consensus disorder prediction 70 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01519 Pste-Chr4 11349271 11351382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01519 28 316 WRKY Transcription Factor Family AT2G47260 46.784 8.90e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste4g01519 WRKY 2.9e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01519 4 11349271 11351382 Pste4g01519 4 11349271 11351382 ECH
Pste5g02797 5 20521781 20523552 Pste4g01519 4 11349271 11351382 PCT