Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01496 TATGGTCTCCCCATTTCGACTTTGATCATGCACTAACTAACCGATATTATAACTTAAAATATAGTGCCTAGCCTTGAAATTGTGGTAATACTAGCATTACCATTACCATGGTTCCCAAATCACATTTCCAAATCATTATTCTATTTCTTTTTTCATTATTGTACACTACCTCCAGCTATTCTCATATAGAGGCCGATTTTGACAAATGGGTATCATGGAATGCAAAAAATTATGAGAAAAAGAACGTATTGGAAGCCAAAAGGAAAGTCAGGGGTCCAGATTTGAAGCTGAGGCAGGCTGAGAGTAACAAAGTTAGCATAACAGTTAGCCAAGACGGTTCTGGTGACTTCAAGACCATTACAGAAGCTCTTAAGAGCATTCCACTGGGCAACACTAAGAGAGTTATAGTGTCAATTGCACCGGGTGTTTATAGAGAGAAGGTGATGATTCCCAGAACATTGCCTTTTATTACATTGTTAGGAGACTCCGGGGATCCACCAACCATCACTGGAAATGATACAGCATCTGTGGTTGGAAGGACGTTCCAGAGTGCAACTGTTGCTGTGGATGCAAGCTATTTCGTGGCTATCAACATAAAATTTGAGAACAGCGCTCCGCATGTGATTGGAAGGAGGGGGGAACAAGCAGTGGCGCTGCGCATCTCAGGAACAAAAGCTGCATTTTATAATTGCAGTTTCAATGGGGCTCAAGACACTCTTTATGATCACAAAGGCCTTCATTACTTCAACAACTGCTCTATTCAAGGTTCTGTCGATTTCATCTTCGGTTCTGGGAAATCCCTTTACGAGCAGAATTGCAATCTAAATTCCACAACGAAGAAGGTGGCTTCCATCACAGCTCAAAAGCGTACAAATTCGTCACTGGAGAGTGGATTCTCATTTAAAAACTGCACAGTAACAGGAAGTGGGCAGGTTTATCTGGGAAGAGCATGGGGAGATTATTCCAGAGTTGTTTTCTCTTACACCTACATGGACAACATTGTTCTCTCCAAAGGATGGAGTGATTGGGGGGATCAAAAGCGTGACTCGAGAGTTTATTATGGAGAATACAAGTGTAGTGGGCCAGGAGCTAACTTGGCTGGAAGAGTGCCATGGGCACGTGTGCTTACGGACGAAGAGGCCAAGCCTTTTATTGGGATCCAGTTCATTGAAGGGGGCACTTGGCTTATTCGCCTCTAAGTAACCACTCCATTTCTGCTTTCAACACCTAGCTATTAGACTGCACCATCTACTACTTCAATAATAATACCATTCAGACAATGAATATTGTTATAAATTTACTATATGTACTTATACCGTATCCTATTTCTATATTTTCACAATTCATCCGTGCATTTCAATTGCTCTAATTAACTATTAAGAGCACTAAATTCATTCATGTATGTCAC 1408 0.4119 MVPKSHFQIIILFLFSLLYTTSSYSHIEADFDKWVSWNAKNYEKKNVLEAKRKVRGPDLKLRQAESNKVSITVSQDGSGDFKTITEALKSIPLGNTKRVIVSIAPGVYREKVMIPRTLPFITLLGDSGDPPTITGNDTASVVGRTFQSATVAVDASYFVAINIKFENSAPHVIGRRGEQAVALRISGTKAAFYNCSFNGAQDTLYDHKGLHYFNNCSIQGSVDFIFGSGKSLYEQNCNLNSTTKKVASITAQKRTNSSLESGFSFKNCTVTGSGQVYLGRAWGDYSRVVFSYTYMDNIVLSKGWSDWGDQKRDSRVYYGEYKCSGPGANLAGRVPWARVLTDEEAKPFIGIQFIEGGTWLIRL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01496 363 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Pste4g01496 363 Pfam Pectinesterase 71 356 IPR000070 GO:0030599|GO:0042545
Pste4g01496 363 FunFam Pectinesterase 66 362 - -
Pste4g01496 363 SUPERFAMILY Pectin lyase-like 70 360 IPR011050 -
Pste4g01496 363 Gene3D - 63 362 IPR012334 -
Pste4g01496 363 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 60 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01496 Pste-Chr4 11144594 11150794 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01496 71 360 Carbohydrate Esterase AT5G47500 47.651 1.73e-91 276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01496 4 11144594 11150794 Pste4g01496 4 11144594 11150794 ECH