Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01493 CACCTCTTCAGCCCATCTCTCCCTATATAAATCACCTTCTCTATCATACACTAACCAACTAAGATATTTTCTCACAACCATCTCCCTCATTAATTTCTCTCCGAGTTCCAAACAAGTAAAGGGTCCAAATAAGTGTAATATGGAGATCACGAGTGCCCAGATGATTAGAAGCTTATCAGATAGTGACTCATCTGAAACATATGCATGTGAAGAAGATATGGTAATCAAGAAAGGTCCGTGGACTGAGGAAGAGGATTCGGTTCTCATCGACTACGTCAACGTCCACGGCGAAGGTCACTGGAACTCCCTCGCTCGCTCTGCAGGTCTAAAGCGAACGGGCAAAAGTTGCAGACTAAGATGGTTGAACTACTTGCGTCCAAATGTTCGGCGTGGGAACATAACCCTTCAAGAACAGCTCATGATTCTCGAACTCCATTCCCGCTGGGGCAATCGGTGGGCTAAAATAGCAGAACAATTACCGGGGAGAACAGACAATGAGATAAAGAACTATTGGAGGACTAGAGTGGTGAAGCAGGCAAAGCAACTGAAATGTGATGTAAACAGCAAACAGTTCAGGGACGCAGTGCGTTTTGTTTGGATGCCACGACTTATGGAGCAGATTCAGGCTTCTTGCAGGAACACTCCTCCTTCTTCTTCCTACTGTGGCCCTCAACAAACCACCTTGTTTTGCGACAACTCTATGGTGCTTGATGTTCAGCCTCCCTCTCTTTCTGATACAATTACCAGTACAACAACTTCGTCTTACAATTTAATGGGTGATGCTGGTAGCTGCTCATTCGATAGCGCACAAAAGGAGTTGCCACAATGGGACTACTCAGACCTCCAAGCATTTGAACCAGCAAATGGTTTTGCTGATGCTGACTTGTGGACTGATGAAAACATTTGGTTCTTGCAGCAGCATCTTGCTGATAATTTCTGATCCACTTTTTCTTTCAATTTACATTAGGCATTATAGTTAAACAGTTCAAAGATATCTTAGTTTAAACTAGTCAGTGCCATTTCACTCACCATTCATTGTAATTGTCCTACACCTATAATAATTTTTTTTTCCCGAATTAAGATACTTGTAAATGAATACAACACCTCTTTGATAGTATCTCCAATGTAAGAGTTTAAGCTTTTAACTCTACTTTGTGAATCCCTC 1165 0.4223 MEITSAQMIRSLSDSDSSETYACEEDMVIKKGPWTEEEDSVLIDYVNVHGEGHWNSLARSAGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLMILELHSRWGNRWAKIAEQLPGRTDNEIKNYWRTRVVKQAKQLKCDVNSKQFRDAVRFVWMPRLMEQIQASCRNTPPSSSYCGPQQTTLFCDNSMVLDVQPPSLSDTITSTTTSSYNLMGDAGSCSFDSAQKELPQWDYSDLQAFEPANGFADADLWTDENIWFLQQHLADNF 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01493 266 Gene3D - 28 84 - -
Pste4g01493 266 FunFam MYB transcription factor 88 151 - -
Pste4g01493 266 CDD SANT 88 127 IPR001005 -
Pste4g01493 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 82 IPR017930 -
Pste4g01493 266 ProSiteProfiles Myb-like domain profile. 26 78 IPR001005 -
Pste4g01493 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 133 IPR017930 -
Pste4g01493 266 ProSiteProfiles Myb-like domain profile. 79 129 IPR001005 -
Pste4g01493 266 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 28 201 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pste4g01493 266 SUPERFAMILY Homeodomain-like 29 125 IPR009057 -
Pste4g01493 266 Gene3D - 88 129 - -
Pste4g01493 266 SMART sant 30 80 IPR001005 -
Pste4g01493 266 SMART sant 83 131 IPR001005 -
Pste4g01493 266 FunFam Myb transcription factor 31 83 - -
Pste4g01493 266 CDD SANT 33 78 IPR001005 -
Pste4g01493 266 Pfam Myb-like DNA-binding domain 84 127 IPR001005 -
Pste4g01493 266 Pfam Myb-like DNA-binding domain 31 78 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01493 Pste-Chr4 11125599 11126955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01493 24 262 MYB Transcription Factor Family AT2G47190 48.062 1.65e-77 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste4g01493 Myb_DNA-binding 2.3e-15 CL0123