Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01467 ATGGTGGCTGAAGCAGAGGTTGTTTGTCAACAGAGCATGGGTGTGTTGGATGTGAAGCATTTTCCAAACAAGGGAAGCGATGTTCACGAGATCGCAGATTCAGATTCTAATTCGCCTCCGAGTTTTGTCCGAGTTCGTGTTACTGAGTCCGTCTCAGCCGAGTTACTTACTTCACCAGAAGATGCTAGGTCTGCAGAAAGGATCTCAGATGCTGCTCTTGAATCTGCTGTTCTGCAATTTATACCTTGCATCCGTTCTGGTAGTTTTGCTGACATTGGGCCACGGAGATACATGGAAGATGAACATATAAGGATAGATGATTTGTCATCTCATTTGGGATCACTTTATAACTTTCCCGAACCAAGTGCCTTTTATGGGGTGTTTGATGGTCATGGAGGACCTGAAGCTGCAGCTTATATAAGAAAAAACGTCATAAAATTCTTCTTTGAGGACGTCAGTTTCCCCCAAACATCTGAAGTCAGTACCATATTTTTGGAAGAGGTTGAGGATTCCCTCAGGAAGGCGTTTCTTTTGGCTGATTCAGCTTTGGCAGATGATTGCAGTGTGAATAGTTCATCAGGCACCACAGCTCTTACTGCTTTGATCTTTGGAAGGCTTCTAATGGTGGCCAATGCTGGTGACTGCCGTGCCGTTCTCTGTCGTAAAGGAGAGGCCATTGACATGTCTCAAGATCACAGGCCAATTTATCCATCAGAGCGGATGCGAGTTGAAAAATTGGGCGGCTACATTGATGATGGTTATCTCAATGGGGTTTTATCAGTTACTCGAGCACTAGGGGACTGGGACATGAAATCACCTAATGGTGATCCCTCACCTTTGATTGCAGAGCCTGAGTTCCGGCAAGTGGTTCTAACAGAGGATGATGAATTCCTCATCATAGGATGTGATGGCATCTGGGATGTGATGTCAAGTCAGCATGCAGTTAGCCTTGTTCGCAAAGGCCTGAGGCGGCATGATGACCCAGAGAAATGCGCCAGGGACCTTGTTATGGAGGCATTACGCCTGAACACATTTGACAATCTTACGGTGATTATTGTATGCTTCTCTTCCCTTGACCACATGGACCCAGAGCCATCACCACCACGTCAACGAAAATTGAGATGCTGTAGCCTCTCTGCAGAAGCTCTTTGTAGCTTGAGGAGCTTGTTGGAAGGCAGTGCTAGCAACTGAATGTGTTTATATACACGGTTCATCGAATAACGTTGTTGAGATTATACATGCTGTTTTTGGCTGTTTCAGTTTAGACATTGGAAAAAGCAGCCATCATTTTTTAAGTGGTCGGTTTATGTACATAGCTTGGACTAGAGGATGGTGGTGTAAATATGTACTGTCGTTACATTATCATTTTGTACTATAGTCAATTTTTATGACTGCCACATTCATGTCAAATTCTTGTGTGTCCATAAAACTATTTGGAATTGCTTAGTTTCTATTCCATTATCTGTTAGAAATTATATGATTGGAA 1486 0.4354 MVAEAEVVCQQSMGVLDVKHFPNKGSDVHEIADSDSNSPPSFVRVRVTESVSAELLTSPEDARSAERISDAALESAVLQFIPCIRSGSFADIGPRRYMEDEHIRIDDLSSHLGSLYNFPEPSAFYGVFDGHGGPEAAAYIRKNVIKFFFEDVSFPQTSEVSTIFLEEVEDSLRKAFLLADSALADDCSVNSSSGTTALTALIFGRLLMVANAGDCRAVLCRKGEAIDMSQDHRPIYPSERMRVEKLGGYIDDGYLNGVLSVTRALGDWDMKSPNGDPSPLIAEPEFRQVVLTEDDEFLIIGCDGIWDVMSSQHAVSLVRKGLRRHDDPEKCARDLVMEALRLNTFDNLTVIIVCFSSLDHMDPEPSPPRQRKLRCCSLSAEALCSLRSLLEGSASN 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01467 396 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Pste4g01467 396 SMART PP2C_4 74 353 IPR001932 -
Pste4g01467 396 ProSiteProfiles PPM-type phosphatase domain profile. 85 355 IPR001932 -
Pste4g01467 396 SUPERFAMILY PP2C-like 79 357 IPR036457 -
Pste4g01467 396 CDD PP2Cc 84 355 IPR001932 -
Pste4g01467 396 Gene3D - 65 361 IPR036457 -
Pste4g01467 396 Pfam Protein phosphatase 2C 95 347 IPR001932 -
Pste4g01467 396 FunFam Probable protein phosphatase 2C 22 69 358 - -
Pste4g01467 396 SMART PP2C_SIG_2 100 355 IPR001932 -
Pste4g01467 396 PANTHER PROTEIN PHOSPHATASE 2C 63 353 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01467 Pste-Chr4 10921172 10923729 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01467 98 392 PP2C-type Phosphatase Gene Family AT3G62260 70.608 8.84e-155 436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01467 4 10921172 10923729 Pste4g01467 4 10921172 10923729 ECH