Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01459 AATAAGCAATAAGCAATAAGCATACCATAGTACCATACCTTCTGAAAGGGAAAATAAAAAAGAAATAAAATTCACATTCACATCGCCATCATCATCAACAACAACAATAACACCGTTTCCTTCCATAGAACCTGTTCGCCATTTGCGTGGCGCACTTACCGACATCCACTCGCCGCCGATCTGCTTTGCTTCTCACGCCAAACCTCTGACGTACCCTTGACTTGGGAATTTGGGAGTGTTGACGGTTATGCGGATTCCCCTTAATTGCAACCATGGTTGCGTGGGTGTGCTATTTTTGGGACTGTTGGGGATGAAGTAAGCTTAATTGGTTGTGATTCGGTGTTGCTAATTTCGTACTGTTACTTAATTTAGCTTTGGAAGTTGTTGTTTGTGACCATGGAAGCTAGATTTGGGGCTGAAGCTTATCATTTTTATGGTATGGGGGCTTCGTCGGATTTGAGGAGTGTGGGGAAGAGGTCCTCAGAGTGGGATTTGAATGATTGGAGATGGGATGGTGATCTGTTCATTGCTAGCCGGCTGAATCCAGTGCCAGCAGATGGTGTGGGAGTGGGACAGCAATTTTTCCCTCTTGGGTCTGGGATCCCGGTGGCCGGAGGTCCCTCCAACAGTTCTTCCTGCTCTGAGGAAGTGGATCCCAAGGGGAGCAAGGAAGGGGACAAGAAAAGGAGAGTTATTGTGCTTGAGGATGATGGCGTGAATGAGGAAGCAGGCACTCTTAGTTTAAAGCTTGGAGGGCATCCTTCTACAGTGCTGGATAGGGAAGTTGTCAGCTGGGATGTTGTGAATGGGAAGAAAAGTAGAGTTTCTGGAAGTACTTCAAATCGAGCTGTTTGTCAGGTGGAGGATTGCAGTGCTGATCTGAGCATAGCTAAGGATTATCACAGACGACATAAAGTTTGTGAGATGCACTCCAAGGCCAGTAGGGCGCTTGTGGGAAATGCAATGCAGAGATTCTGTCAACAATGTAGTAGGTTTCACATGCTTCAAGAGTTTGATGAAGGAAAGAGAAGTTGTCGAAGACGCTTGGCAGGCCATAATAAACGAAGAAGGAAAACAAATCATGAAGCTGCTGCTAATGGAAGTGCAATAAATGATGATCAGACTAGTAGCTATTTGTTGATAACTGACAGGTCAGATCAGACTACAGATCAAGATCTACTGACTCATATTCTGAGGAGTCTTGCTAGTCAGACTGGTGAGCAAGGGGGCAAGAACATATCTAACCTTTTGCGAGAACCAGAGAATTTGTTGAGAGAAGGGGTTTCATCAAGGAAGTCAGAGATGGTGTCAACTTTATTCTCCAATGGTTCTCAAGGCTCTCCAACTGTTACAAGACAAAATGAAACTGTATCCCTGGCTAAAGTGCAGCAACAAGTGATGCATGCACATGATGCTACGGCTTCTGATCAGCAAATTACATCTTCTATAAAGCCTAGCATGTCAAACAGTCCTCCAGCCTACTCAGAAGCCAGAGACAGTACTGCTGGTCAGATCAAGATGAATAATTTTGATTTGAATGACATATATATTGACTCAGATGATGGTATGGAAGATTTAGAAAGAATACCAGTCTCTACAAATCTTGTAACTAGCTCTCTTGATTACCCATGGACACAACAAGATTCCCATCAGTCAAGTCCACCTCAAACAAGTGGAAATTCTGATTCTGCTTCGGCCCAGTCTCCTTCTAGTTCTAGTGGAGAAGCTCAGAGTCGTACAGATCGAATTGTTTTAAAGCTCTTTGGTAAAGAGCCAAATGATTTTCCTCTTGTACTTAGAGCACAGATTCTTGACTGGTTATCTCACAGTCCTACCGATATGGAGAGCTACATACGGCCGGGTTGTATTGTTTTGACTATTTATCTGCGTCAGGCTGAGGCTTTGTGGGAGGAAGGGACACCCGTGACCTTACACACCTTCCTCCCACTTTTGCAGCTTTGCTGTGATTTGACTTCCAGTTTGAATAGGCTTTTGGATGTCTCAGATGATACTTTTTGGAGAAATGGATGGGTTCACATTAGGGTGCAGCAACAGATGGCCTTCATTTTTAATGGTCAAGTTGTCATAGATACCTCCTTACCTTTCAGAAGTAACAATTATAGCAAGATTTTGACTGTTAGTCCAATTGCTGTACCAGCATCAAAGAGAGCTCAATTTTCTGTTAAGGGTGTCAACCTGATACGCCCTGCCACTAGGTTAATGTGTGCTTTAGAAGGGAAATATCTGGTCTGTGAAGAGTCTCACATGTCAATGGATCAATGCTCCAAAGAATCTGATGAACTTCAGTGCATCCAGTTTTCATGTTCTGTTCCTGTGATGAATGGAAGAGGGTTTATTGAGATTGAGGACCAGGGTTTGAGTAGCAGTTTTTTTCCTTTCATTGTTGTGGAGGAGGATGTTTGTTCAGAAATCTGTACACTTGAGCCTCTTCTAGAATTTAGTGAAACGGATCCAGATATTGAAGGGACTGGAAAAATTACAGCCAAAAATCAAGCAATGGATTTTATTCATGAAATGGGTTGGCTTCTTCACAGAAGCCAGTTGAAATTAAGGATGGTTCACCTGAACTCTAGTGTGGATCTCTTTCCATTGAAACGGTTCAAGTGGCTTATTGAGTTTTCCATGGATCATGATTGGTGTGCAGCAGTGAAAAAACTGTTGAACTTACTGCTTGATGGAACTGTAAATACAGGAGATCATCATTCCCTGTATCTCGCACTTTCAGAGATGGGTCTACTTCACAAAGCTGTAAGGAGAAATAGCAAGCAGTTAGTGGAGTTGCTTCTGAGATACGTTCCTGAGAATATATCTGACAAACTAGGACCTGAAGACAAAGCACTAGTTGATGGAGAAAACCAGACCTTCTTGTTTAGACCTGATGTTGTCGGTCCTGCTGGTTTGACACCACTCCATATAGCAGCTGGGAAAGATGGTTCTGAGGATGTACTTGATGCTTTGACTAACGATCCTTGCATGGTGGGAATTGAAGCATGGAAAAATGCTCGTGACAGCACAGGCTCCACACCAGAAGATTATGCACGTTTACGTGGCCATTATACTTACATTCACTTAGTGCAGAAAAAGATTAACAAGAGACAAGGAGCAGCTCATGTGGTGGTTGAGATTCCAAGCAACTCAACAGAGAGCACTACAAACCAGAAGCAAAATGAGTCATCCACTAGCTTTGAGATCGGAAAGGCTGCAGTAAGGCTTAGCCAAGGGCACTGTAAACTTTGTGATAATAAAATTTCTTGCAGAACTGCAGTGGGTAGGTCTTTGGTTTACAGACCTGCTATGCTCTCAATGGTGGCCATAGCCGCAGTCTGTGTCTGTGTGGCCCTTCTGTTTAAAAGCTCTCCTGAAGTTATATGTATGTTCCGACCCTTCAGGTGGGAAACCTTGGACTTTGGAACAAGCTAAGGTTCATTAACTTTCAACTCAATAAAACTTGATAGGTAATGTAAGGATGCGTTCATAGACTGAATGACCGAGATTTCCTGTAGGACTGGTTCTTTGTGTTAGCTAAACTGTGCAATATTATTTACGTATTTGTTTTCCTTAAATGGTCATGGTCATCATTGTACAATGTATGTAGATGAAACTCTACTTCAAACTTTATTGGTTAGGAGCTTTTTATTTTAGTGTAATTCAAGTGTGGAATCTTAACGATCATGTCTTTGATTAAATGGCGACTTTGTTTAATGGTAATTAAATTCAAATATCGACTATCCAGGTTTGTAACATATTTGGATTTATTAAAATTAAAAGACAGCCCC 3797 0.4235 MEARFGAEAYHFYGMGASSDLRSVGKRSSEWDLNDWRWDGDLFIASRLNPVPADGVGVGQQFFPLGSGIPVAGGPSNSSSCSEEVDPKGSKEGDKKRRVIVLEDDGVNEEAGTLSLKLGGHPSTVLDREVVSWDVVNGKKSRVSGSTSNRAVCQVEDCSADLSIAKDYHRRHKVCEMHSKASRALVGNAMQRFCQQCSRFHMLQEFDEGKRSCRRRLAGHNKRRRKTNHEAAANGSAINDDQTSSYLLITDRSDQTTDQDLLTHILRSLASQTGEQGGKNISNLLREPENLLREGVSSRKSEMVSTLFSNGSQGSPTVTRQNETVSLAKVQQQVMHAHDATASDQQITSSIKPSMSNSPPAYSEARDSTAGQIKMNNFDLNDIYIDSDDGMEDLERIPVSTNLVTSSLDYPWTQQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVLKLFGKEPNDFPLVLRAQILDWLSHSPTDMESYIRPGCIVLTIYLRQAEALWEEGTPVTLHTFLPLLQLCCDLTSSLNRLLDVSDDTFWRNGWVHIRVQQQMAFIFNGQVVIDTSLPFRSNNYSKILTVSPIAVPASKRAQFSVKGVNLIRPATRLMCALEGKYLVCEESHMSMDQCSKESDELQCIQFSCSVPVMNGRGFIEIEDQGLSSSFFPFIVVEEDVCSEICTLEPLLEFSETDPDIEGTGKITAKNQAMDFIHEMGWLLHRSQLKLRMVHLNSSVDLFPLKRFKWLIEFSMDHDWCAAVKKLLNLLLDGTVNTGDHHSLYLALSEMGLLHKAVRRNSKQLVELLLRYVPENISDKLGPEDKALVDGENQTFLFRPDVVGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKNARDSTGSTPEDYARLRGHYTYIHLVQKKINKRQGAAHVVVEIPSNSTESTTNQKQNESSTSFEIGKAAVRLSQGHCKLCDNKISCRTAVGRSLVYRPAMLSMVAIAAVCVCVALLFKSSPEVICMFRPFRWETLDFGTS 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01459 1014 MobiDBLite consensus disorder prediction 412 446 - -
Pste4g01459 1014 Gene3D - 749 948 IPR036770 -
Pste4g01459 1014 Gene3D - 143 214 IPR036893 GO:0003677|GO:0005634
Pste4g01459 1014 MobiDBLite consensus disorder prediction 218 237 - -
Pste4g01459 1014 ProSiteProfiles Zinc finger SBP-type profile. 150 227 IPR004333 GO:0003677
Pste4g01459 1014 SUPERFAMILY SBT domain 151 231 IPR036893 GO:0003677|GO:0005634
Pste4g01459 1014 FunFam Squamosa promoter-binding-like protein 14 144 214 - -
Pste4g01459 1014 SUPERFAMILY Ankyrin repeat 776 900 IPR036770 -
Pste4g01459 1014 MobiDBLite consensus disorder prediction 340 370 - -
Pste4g01459 1014 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 87 901 IPR044817 GO:0003677
Pste4g01459 1014 Pfam SBP domain 153 226 IPR004333 GO:0003677
Pste4g01459 1014 MobiDBLite consensus disorder prediction 73 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01459 Pste-Chr4 10873190 10882287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01459 1 1014 SBP-box Gene Family AT3G60030 52.445 0.0 939
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pste4g01459 SBP 8e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01459 4 10873190 10882287 Pste4g01459 4 10873190 10882287 ECH