Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01453 CATGATATTAGCAGTAGAGAAAAAAAATAAAATCATTGTAACTAATAATACACTAGTAACACAAAAATCATAATTCCAATTCAAAAAGAGTCAAGAACTTCTTCCACTCTTTTATCCTACGCACTCCTCCCTGCCTATCCTGCGCATCTTTCTCCGGTTTCGGAACCCAGATCCTCCCCTTCACACGCTCACTCTCTGCGGCTCTACACTCTCAATTTCGCCGTTTTGCCTTTTCATTTCATTTCAGTGGGAAGGAATCATGAGTTGTTTCAGCTGTTGTGAAGAGGATGACTTGCACAAGGCTGCTGAAAGTGGAGGACCCTATGTCGTAAAAAACCCAGCAGGGAATGATGGAAATTATCACTCTTCTGAAACTGCAAAGCAGGGCAATCAGCCTGTTAAAGCTCAGCCCATTGAAGTTCCTAATATACCAGAAGATGAACTAAAAGAAGTTACGGATAACTTTGGTCAAGATTCTCTTATTGGAGAAGGTTCCTATGGAAGAGTATATTATGGTGTTCTTAAAAGTGGGCAAGCTGCAGCAATCAAGAGGTTGGATGCCAGTAAACAGCCCGATGAGGAATTTTTAGCCCAGGTATCAATGGTATCAAGGTTGAAGCATGAAAATTTTGTTCAGTTGCTTGGATATTGCATTGATGGAAGCTCCCGTATTCTTGCTTACGAGTTTGCATCTAATGGGTCTCTTCATGATATTTTACATGGCAGAAAAGGTGTTAAAGGAGCACAGCCTGGTCCAGTTTTAACATGGGCCCAAAGAGTAAAAATTGCTGTGGGGGCCGCAAGAGGACTTGAATACTTGCATGAGAAGGCTGATCCGCACATTATCCACCGGGACATTAAGTCAAGCAATGTGCTAATCTTTGATAATGATGTTGCTAAAATTGCAGATTTTGATTTATCAAATCAGGCACCTGACATGGCTGCGCGTCTTCATTCTACTCGTGTCCTAGGAACTTTTGGTTACCATGCTCCAGAATATGCAATGACTGGACAATTGAATGCTAAGAGTGATGTATACAGTTTTGGTGTTGTCCTTCTGGAACTTCTGACTGGAAGGAAACCTGTTGATCATACACTACCACGTGGGCAGCAGAGTCTGGCTACACCAAAACTCAGTGAAGATAAAGTCAGGCAGTGTGTTGATACAAGACTAGGAGGAGAATACCCACCCAAAGCTGTTGCTAAGATGGCTGCTGTTGCTGCACTGTGTGTGCAATATGAAGCTGATTTCAGACCAAACATGAGCATTGTAGTCAAAGCTCTACAACCTTTGTTGACTGCACGACCCGGACCTGCTGGTGAAACACCAAATTAATCTCTATATCTCTATATATTTGTGAGCATGTGTACAACACGCATGCAAAATATAAGAGACTGCTTCAGAAGCTGGTGGTAGATTGCTCAGACATGACTTTAATCCCATTGTTCACACTGCATTCATTTTGTCCATAATCCATGAGGTTCTTTGAGGTTTTCCTTGCTTTTATTCATTTTAATGTATTTGCTTTCTCTACCCATCCTTTACTTCTGGGATGATTGCCATCTTTACGACAAAGTTTTGGGAAAAACAACAAAATAGAATTGGGTATACTCAAAAGCTAAGAGCAAGCCAATGGCCTATCTCTACCGGAAATAGTTATTCACAAGAAGGCGTTCTTATTAGATTGATTCTTTTAATTTTTTATTTTAAATGTTTGTCAAATTGAGAGTTGTATAAAATATTCATAATTTCAATATGTCCATTCCTGTGTTTTAGGGGAAAAAATTGTTTCGCTGCTCAATTTTGTGGTTGTTTCATTTGCGATTTAATTTTGTATCACATGGATTGTTTTCTTTACTAATTTCTTTTGCCTCGTCGGATCATACATGTCTTTAAATTGAG 1903 0.3978 MSCFSCCEEDDLHKAAESGGPYVVKNPAGNDGNYHSSETAKQGNQPVKAQPIEVPNIPEDELKEVTDNFGQDSLIGEGSYGRVYYGVLKSGQAAAIKRLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCIDGSSRILAYEFASNGSLHDILHGRKGVKGAQPGPVLTWAQRVKIAVGAARGLEYLHEKADPHIIHRDIKSSNVLIFDNDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLATPKLSEDKVRQCVDTRLGGEYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLTARPGPAGETPN 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01453 358 PIRSF ILK 7 349 - -
Pste4g01453 358 Gene3D Transferase(Phosphotransferase) domain 1 144 350 - -
Pste4g01453 358 ProSitePatterns Protein kinases ATP-binding region signature. 75 97 IPR017441 GO:0005524
Pste4g01453 358 SUPERFAMILY Protein kinase-like (PK-like) 48 342 IPR011009 -
Pste4g01453 358 ProSiteProfiles Protein kinase domain profile. 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01453 358 MobiDBLite consensus disorder prediction 17 47 - -
Pste4g01453 358 SMART serkin_6 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01453 358 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 348 - -
Pste4g01453 358 FunFam PTI1-like tyrosine-protein kinase 3 33 143 - -
Pste4g01453 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Pste4g01453 358 FunFam pto-interacting protein 1 145 353 - -
Pste4g01453 358 MobiDBLite consensus disorder prediction 30 46 - -
Pste4g01453 358 Gene3D Phosphorylase Kinase; domain 1 30 143 - -
Pste4g01453 358 Pfam Protein tyrosine and serine/threonine kinase 73 342 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01453 Pste-Chr4 10826775 10830771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01453 60 343 Receptor kinase-like Gene Family AT4G02010 51.203 4.86e-88 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pste4g01453 PK_Tyr_Ser-Thr 6.1e-47 CL0016