Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01450 ATCTCGGGGGTTTCCCTGATCCTAGTGGTGGGTGTTGCCATCGGCGTTGTGGTTGTGGTTAATAAAAGCGACGTATCTACTCCTGAAGTAGCAGCTCAACAAAAGAATGTGAAGGCAATGTGCGAAAGCACCGAAGACCAGAAGCTTTGTCACGAGACTCTGATGAATGTGAAACACGAAAACTCCTCAGACCCAAAGGTATACATACAAGCTGGAGTGGATGCAACCGTGAAAAGCATTATACAAGCGTTGAATATGAGTGATAAACTGAAAGTGGAGCATAAAGACAACGATCCTGGCATAAAAATGGCTCTGGATGATTGCAAGGACTTAATCGAATTCGCGTTGGACAGCATAGAGGCCTCGATGAATTTGGTTCGTGGCCACAACGTACAAACGTTGTATACTCAATCGCCTGATTTTAGGAACTGGTTGAGTGCCATTATCTCGTACCAGGAATCATGCATGGATGGTTTCAACAACAAGACAAACGGTGAGGAAAAGATTAAGGAACAATTGCACTCGGAGAGTTTGGACCAAATGGGGAAGCTCACTGGCATAGTCCTTGACATTGTCACCAATCTATCCAATATCCTTGAGAGATTTAACTTGAGGTTGGAAGTGAACCCTTCTGCTCGTCGTCTTCTTGATGTGGATGATGAAGGATACCCTTCGTGGTTCTCTGCAGCAGATCGCAAGCTCCTTGCTAATGCCCAACAGGGACAAGCACCCCCTCCAAACGCAGTGGTTGCCAAAGATGGTAGTGGCAAATTTAAAACCGTTAAGGAGGCCATTGACTCCTACCCTAAGGACTTCAAAGGCAGGTTTGTTATTTATGTTAAGGCTGGGGTCTATGATGAGTACATCACCATTCCTAAAAAGTCAGCCAATATTTACTTGTATGGCGATGGACCTACAAAGAGCATTATTACTGGTCGCAAAAACTTCGTAGATGGCGTCAAGACAATGCAAACTGCCACCTTTGCCAATACTGCACCTGGGTTCATCGCAAAGTCAATTGCATTTGAGAACACAGCTGGAGCCGTGAAGCACCAGGCAGTGGCATTCAGAAACCAGGGAGACATGTCAGCACTCTTCGACTGCGCCATGCACGGTTACCAAGACACATTGTACGTTCACGCGAACCGTCAATTCTACCGGAACTGCGAAATCTCAGGCACCATAGACTTCATATTCGGAGCATCCGCAGCCTTGATCCAGAACTCGAGAATCATAGTGCGGAAGCCAGAGGCTAACCAATTCAACACAGTGACCGCAGATGGAACGAAAATGAAGAACATGGCCACAGGGATTGTGCTGCAGAACTGCGAGATACTCGCAGAGAAGGAACTATTCCCTTCAAGGTTACAAGTGAAATCGTACCTGGGAAGGCCGTGGAAGCAGTTTGCAAGAACAGTGGTTATGGAATGCAACATTGGTGACCTTATTCAGCCAGAAGGGTGGACTCCTTGGGATGGGAACATGTTCCTTGACACCTTGTACTATGCTGAGTATGCTAATACTGGACCTGGTTCTAACGTCCAAGGAAGAGTCAAGTGGAAGGGTTACCATCCCAATATTAACAAGAATGAAGCTGCGCAATTCACTGCTGGCCAATTCCTCAGAGGTGGACCCACTGGAAATGCTGATGGTTGGTTGAAGGCTACTGGTGTTCCTTACGCAATTGTGGGCGTTGCCCTGGGCGTGGTGGCCTTTGTGTCGACAAACGAAGAAGGTGGAGAGGAAGGGGCAGGGGACGCGACGGGGCGTGTGGCGAGCCACAATAAAGCGGTGGCAGCAGTGTGCCAAAACAGCGACGACAAGAAGTTTTGCACGGACACTTTCAAGTCGGTGAACACCTCAGACCCAACGGTGTACGTGAAAACGGTGGTGAAGAACGCGATGGAGGGGGTGATAAAAGCGTACAACCTGAGCGACACTCTGACTGTGGAAAACAGTAAGAGCAACTCTACCCTGAAAATGGCCCTGGAGGATTGTAAGGATTTGTTGGACTTCGCTATAGACGAATTGCAGGCGTCCCAAATTCTGGTGAAAGAAAACAACGTTAACAACATCAACGACCGTGTGGCGGAACTGAAAAACTGGATTGGGGCTGTGGTGGCGTACCAGGAATCGTGTCTTGACGGGTTTAACACGGACACCGAGAAGGAGGTGCAGTCGAAGCTGCAAACTGGGGGTTTGGACAACGTTGGGAAGCTGACGGCGTTAGCACTTGACGTTGTGTCTAGCTTGGCGGAAATACTATCTGACTTCAACTTGAATTTGACGCCGAAACAAACTTCCTCTCGTCGGCTTCTGGATGTGGATCAAGAGGGCTACCCTTCTTGGATGTCTATGCCCGATCGCAAGCTCTTGGCATCCAATTCCCTTCCTCCTAATGCCGTTGTTTCCAAGGATGGTAGTGGCCAATATAAGACCGTTTTGGATGCTATTAACGCCTACCCTAAGAATCATCAAGGCAGATACATCATTTACGTTAAAGCTGGTACCTACGACGAGTACATCAATGTTGACAAAAAGAAGCCCAATATTCTCCTCTATGGCGATGGCCCCACCAAGACCATCATCACCGGCAGTAAAAACATGAAGGATGGCTGGAAGACAATGAGATCTGCTACCTTCGCCACGGTTGCAGCGGACTTCATAGCAAAGTCGATAGCATTTGAGAACACCGCAGGTGCCAGCAAGCACCAAGCGGTGGCGCTGCGCGTACAAGGCGATCGCTCAGCCTTCTTCGATTGCGCCATGCGGGGTTTCCAGGACACCCTCTACGCCCACGCGCACCGTCAGTTCTACCGCAACTGCGAAATCACGGGCACGGTGGATTTCATTTTCGGGTACGGGACCACACTGATCCAAAGCTCGAAACTGATCGTGCGAAAGCCTGACCCGAATCAACAGAACATAATAGTAGCGGACGGGACGGGGCAAAAGAACATGCCCACAGGAGTGGTGCTTCAGAACTGCCAGATCTTGGCGGAATCAGCGTTGGAGCCCCAAAAAATGACTGTGAAGTCGTACTTGGCGAGGCCGTGGAAGGCATACTCAAGAGCCATCTTCATGGAGAACACCATCGGCGATTTCATTCAACCCGATGGCTTTCTTCCCTGGCAAGGAAATATGTTTCTTGACACTTGTTTCTTTGCTGAGTATGCCAACACTGGCACGGGTGCCAATGTTCAAACTAGGGTTAAGTGGAGTAAAGGGGTCCTTACCAAGAATGATGCTGCTAAATACACTGCTGACCAATGGCTCCAAGCCAACACCTGGCAAAGTAGTGGGTTCGGCAGTTTCTCTGATCCTGGTGTGATTGGAGTAGTTGCGGTGGTTCAAAGCCCAAAGAGCGACAAGGGAGCAGGAGAAATAAAATCAACGAACAGGGCGGTGGCAGCGTTGTGCCAAGACTCAGACGACCAGAAATTGTGCAACGATGTGCTATCGTCTTCAAACAGCACAGACCCGAAGGAATACGTGGCAACGGTGGTGAAAACCTCGATGGACAGCGTTATAAAAGCGTTAAACATGAGTGACAGGCTGAATGTTGAGCACGGGAACAGCAGCGAGGGCATGAAGATGGCTCTTGAGGACTGCAAGGACTTGTTGCAATCTGCCATCCACGAGCTCGAGGCGTCCGGTGTGCTGGTTAAAGAGGGCAGCCTTGAGGACGTTAACATGCGTACCTCCGAACTCAAGAACTGGTTGGGCGCTGTTGTTGCCTACCAACAATCTTGCCTCGATGGCTTCAACACCGATGGCGAGAAGAAGGTGCAGGAACAGTTGCAGACAGGTAGCTTGGACAACGTTGGCAAGCTCACCGGCTTGGCCCTCGATGTTGTGTCCGGTATTTCACGCATTCTTCAATCCTTGGACCTCAACTTGGGTCTCAAACCTGCCTCCCGCCGTCTTCTTGATGTCGATGAGGATGGTTACCCCACTTGGGTCTCCGCTGCCGATCGCAAGCTCTTGGCAGATTCTGCACTTTCTCCCCACGCTACTGTTGCTAAGGATGGAAGTGGCCAGTTCAAAACCATCTTGGATGCTATCAACTCTTATCCCAAGAATCACCAAGGCAGATACATCATCTACGTCAAGGCTGGTGTCTATGACGAGTACATTACTGTTGACAAGAAGAAGTTGAACCTCCTCATCTACGGCGATGGCCCCTCAAAGACCGTAATCACCGGTCGCAAAAACTTCGCTGAGGGTACCAAGACCATGAGAACCGCCAGTTTCACCACTGTTGCTGATGACTTCATGGCCAAGTCAATTGCATTCGAGAACACCGCCGGTGCAGAAGGACACCAAGCAGTGGCCCTCCGCGTCCAAGGTGATCGTTCAGTATTCTTTGATTGCGCATTCCGCGGTTACCAAGACACATTGTATGCTCATGCTCACCGTCAGTTCTACCGCAACTGTGAAATCTCTGGAACAATAGACTTTATCTTTGGCTACGCCACCACCTTGATCCAGAACTCGAAGATCTACGCGAGGAAACCCATGGCAAACCAACAGAACATAGTGGTGGCAGATGGAACAGGACAGAAGAACATGCCCACAGGAGTTGTCCTCCAAAACTGCCAGATCATGGCTGATCCTACCCTTCAAGCAGACCGCTTGACAGTGAAAACTTACTTGGCCCGCCCATGGAAGGCATTCTCAAGAGCAGTGTTCATTGAGAATGTTATTGGTGACCTCATCCAGCCTGATGGATATATTCCATGGAATCCCATTGAACCAAACACAAAAGATTGTTTCTTTGCTGAGTTTGGCAACACTGGACCAGGTTCCGCCACCCAGGCAAGGGCCCCATTTAGCAAAGGTCTCATTAGCAAGGAAGAGGCTGCCAAATACACTGCTGAACCCTGGCTCCAAGCTAGCACTTGGTTACCCTCCACCGGCATTCCTTTTGATCCTAGTTTCACCAAAGCTTAATTCATCAAGCTTACTTCGCCATCCCTATCGATTTGCCTATGTTCAGTGTTATAATCTCTTTTTAGTGTACGTACGTCAATAAACAAAACAAAACAAATCCATTTTGGCACTGCTATAGCAGTAGTTACATAGCCAATTGATCCTTGAACTCGTTTGAGGAGGTTATTTGTAATCATTAAATAAGCAGTGTATTCTTTTATGTATTAACCACTTTATCTCTTTATCTCTATCGTCTTCAGTCAACTTATAAAATAGATTGATGATGAAGC 5222 0.487 ISGVSLILVVGVAIGVVVVVNKSDVSTPEVAAQQKNVKAMCESTEDQKLCHETLMNVKHENSSDPKVYIQAGVDATVKSIIQALNMSDKLKVEHKDNDPGIKMALDDCKDLIEFALDSIEASMNLVRGHNVQTLYTQSPDFRNWLSAIISYQESCMDGFNNKTNGEEKIKEQLHSESLDQMGKLTGIVLDIVTNLSNILERFNLRLEVNPSARRLLDVDDEGYPSWFSAADRKLLANAQQGQAPPPNAVVAKDGSGKFKTVKEAIDSYPKDFKGRFVIYVKAGVYDEYITIPKKSANIYLYGDGPTKSIITGRKNFVDGVKTMQTATFANTAPGFIAKSIAFENTAGAVKHQAVAFRNQGDMSALFDCAMHGYQDTLYVHANRQFYRNCEISGTIDFIFGASAALIQNSRIIVRKPEANQFNTVTADGTKMKNMATGIVLQNCEILAEKELFPSRLQVKSYLGRPWKQFARTVVMECNIGDLIQPEGWTPWDGNMFLDTLYYAEYANTGPGSNVQGRVKWKGYHPNINKNEAAQFTAGQFLRGGPTGNADGWLKATGVPYAIVGVALGVVAFVSTNEEGGEEGAGDATGRVASHNKAVAAVCQNSDDKKFCTDTFKSVNTSDPTVYVKTVVKNAMEGVIKAYNLSDTLTVENSKSNSTLKMALEDCKDLLDFAIDELQASQILVKENNVNNINDRVAELKNWIGAVVAYQESCLDGFNTDTEKEVQSKLQTGGLDNVGKLTALALDVVSSLAEILSDFNLNLTPKQTSSRRLLDVDQEGYPSWMSMPDRKLLASNSLPPNAVVSKDGSGQYKTVLDAINAYPKNHQGRYIIYVKAGTYDEYINVDKKKPNILLYGDGPTKTIITGSKNMKDGWKTMRSATFATVAADFIAKSIAFENTAGASKHQAVALRVQGDRSAFFDCAMRGFQDTLYAHAHRQFYRNCEITGTVDFIFGYGTTLIQSSKLIVRKPDPNQQNIIVADGTGQKNMPTGVVLQNCQILAESALEPQKMTVKSYLARPWKAYSRAIFMENTIGDFIQPDGFLPWQGNMFLDTCFFAEYANTGTGANVQTRVKWSKGVLTKNDAAKYTADQWLQANTWQSSGFGSFSDPGVIGVVAVVQSPKSDKGAGEIKSTNRAVAALCQDSDDQKLCNDVLSSSNSTDPKEYVATVVKTSMDSVIKALNMSDRLNVEHGNSSEGMKMALEDCKDLLQSAIHELEASGVLVKEGSLEDVNMRTSELKNWLGAVVAYQQSCLDGFNTDGEKKVQEQLQTGSLDNVGKLTGLALDVVSGISRILQSLDLNLGLKPASRRLLDVDEDGYPTWVSAADRKLLADSALSPHATVAKDGSGQFKTILDAINSYPKNHQGRYIIYVKAGVYDEYITVDKKKLNLLIYGDGPSKTVITGRKNFAEGTKTMRTASFTTVADDFMAKSIAFENTAGAEGHQAVALRVQGDRSVFFDCAFRGYQDTLYAHAHRQFYRNCEISGTIDFIFGYATTLIQNSKIYARKPMANQQNIVVADGTGQKNMPTGVVLQNCQIMADPTLQADRLTVKTYLARPWKAFSRAVFIENVIGDLIQPDGYIPWNPIEPNTKDCFFAEFGNTGPGSATQARAPFSKGLISKEEAAKYTAEPWLQASTWLPSTGIPFDPSFTKA 1650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01450 1650 CDD PMEI-like_3 1138 1291 - -
Pste4g01450 1650 FunFam Pectinesterase 242 563 - -
Pste4g01450 1650 FunFam Pectinesterase 794 1106 - -
Pste4g01450 1650 FunFam Pectinesterase 33 196 - -
Pste4g01450 1650 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 595 751 IPR035513 -
Pste4g01450 1650 Pfam Plant invertase/pectin methylesterase inhibitor 36 191 IPR006501 GO:0004857
Pste4g01450 1650 Pfam Plant invertase/pectin methylesterase inhibitor 597 746 IPR006501 GO:0004857
Pste4g01450 1650 Pfam Plant invertase/pectin methylesterase inhibitor 1135 1284 IPR006501 GO:0004857
Pste4g01450 1650 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 197 IPR035513 -
Pste4g01450 1650 CDD PMEI-like_3 39 197 - -
Pste4g01450 1650 SMART PMEI_2 32 191 IPR006501 GO:0004857
Pste4g01450 1650 SMART PMEI_2 593 747 IPR006501 GO:0004857
Pste4g01450 1650 SMART PMEI_2 1131 1285 IPR006501 GO:0004857
Pste4g01450 1650 Pfam Pectinesterase 247 543 IPR000070 GO:0030599|GO:0042545
Pste4g01450 1650 Pfam Pectinesterase 800 1094 IPR000070 GO:0030599|GO:0042545
Pste4g01450 1650 Pfam Pectinesterase 1338 1632 IPR000070 GO:0030599|GO:0042545
Pste4g01450 1650 PANTHER PECTINESTERASE 12 554 - -
Pste4g01450 1650 ProSitePatterns Pectinesterase signature 2. 391 400 IPR033131 -
Pste4g01450 1650 CDD PMEI-like_3 600 752 - -
Pste4g01450 1650 Gene3D Invertase/pectin methylesterase inhibitor family protein 1131 1290 IPR035513 -
Pste4g01450 1650 Gene3D Invertase/pectin methylesterase inhibitor family protein 592 752 IPR035513 -
Pste4g01450 1650 NCBIfam pectinesterase inhibitor domain 592 746 IPR006501 GO:0004857
Pste4g01450 1650 NCBIfam pectinesterase inhibitor domain 12 195 IPR006501 GO:0004857
Pste4g01450 1650 NCBIfam pectinesterase inhibitor domain 1129 1283 IPR006501 GO:0004857
Pste4g01450 1650 SUPERFAMILY Pectin lyase-like 242 560 IPR011050 -
Pste4g01450 1650 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 1135 1287 IPR035513 -
Pste4g01450 1650 Gene3D - 243 563 IPR012334 -
Pste4g01450 1650 Gene3D - 1331 1647 IPR012334 -
Pste4g01450 1650 Gene3D - 794 1103 IPR012334 -
Pste4g01450 1650 SUPERFAMILY Pectin lyase-like 1333 1644 IPR011050 -
Pste4g01450 1650 SUPERFAMILY Pectin lyase-like 798 1099 IPR011050 -
Pste4g01450 1650 ProSitePatterns Pectinesterase signature 2. 944 953 IPR033131 -
Pste4g01450 1650 ProSitePatterns Pectinesterase signature 2. 1481 1490 IPR033131 -
Pste4g01450 1650 FunFam Pectinesterase 1331 1647 - -
Pste4g01450 1650 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 196 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01450 Pste-Chr4 10808266 10822264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01450 1 560 Carbohydrate Esterase AT3G05610 41.489 1.34e-133 429