Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01436 CACACACCGTCCCATTCCCCTCTCTTCTTTATAACGCCGCTCCCCACCCCATAACAGCGACACACCCTCTCTCAAACCCTAACCCTAACCCTCACCCTCACCCTCGCCCGCCATATTTATGTTATGTTTTCTCAAAATCTGATTCCCTCTCCCGAAAACCCTAGACCCGTGGCGTTCCCTTCCAAACCCATGGGCAATGAGATTGCCATCGCGGCGCAGAAGCCTCCGCCCTCCATTCTTGTTGGCCGCTTCAAGGCTCTCCTCAAGCAGCGCGACGACGAACTCAGGCTCGCTGCCGGCCTCCCCGTCCCCGCCCCCTCCACCGACGAAATCGTCCAGATTTACGAGATTCTCTTGTCCGAACTCACCTGCAATTTGAAACCTATCATCACCGATCTCACTATTATCGCCGAACAGCAGAGGGACCACGCCAAAGGCATTGCTGACGCTATTTGCGCTCGGATTCTCGAGGTGCCAGCAGATCAAAAGCTTCCTTCACTGTATCTGTTGGACAGTATTGTGAAGAACTTTGGGCAGGAATACATTAGATACTTCTCTTTACGTCTGCCAGAAGTTTTCTGTGAGGCATACAGACAGGTTCAGCCCAGTTTGCATCCTGCTATGCGCCATCTTTTTGGTACCTGGTCAAAAGTCTTTCCACCTTCTGTTCTACGCAAGATTGAAGCTGAGTTGCAATTTTCTCAGGAAGTTAATACTCAACCATCTGCCCTGAATCCAGTAAAAGCTTCTGAATCTCCACGGCCAAGTCATGGCATACATGTTAATCCAAAATACTTGCGGCAGTTAGAGCGCTCAACTGTGGATAGTGTTGGTGGTGACAAGTTGGATTCATCAGGAAATGCTAATAATACAAACTTTGGCTTTGTAGCTGGTAAGTCACACCAATTTTTATCAAGCAGGCTTGGAATGTCTTCGTCTCCTTCAAGAGTTGGACTTGATGGGACTTTGTCTGCATCTATGGATGAATATGCAGTTGACAATTCTGCTGGAAGATTAATTGACAGAGACACTCCTCATTCTGCTGTTGATTATGGAGTGACGAAAACATTAGGTAGAGATGTGGAGTTGAGTGAATGGCAAAGGAAGCAGTATTCTGGTGATCGTCGTAATCGATTTCCAACTTCTATCACATACAGTCTTAGTAATGGACATCAGCGTCAAAGTCCAAGAGCTTTAATTGATGCTTATGGAAGTGACAAAAGTCAAGAAACCTCAAGCAGTAAGCCTTTGTTAGTTGAACGGTTGGATAGAAATGGTATAGACAACAAGGTGTTGTCAACATCATGGCAGAATACTGAAGAGGAGGAATTTGATTGGGAAGACATGAGTCCAACCTTAGTAGACCATAGTAGGAATAACAGTTTATTGCCTTCAACTGTTGGTTTCTCCAGGGAAAGGCCTGTTGTTTCAGCTAATGCAACTTTGTCAGAGCAAGGGAAGAGTTGGTCTAGTGGATCTCAGCTTCCTTCAATAGATGATTCTTCTGCTATAGCCGAAGATGCATTTGCCTCTCCAGCATTTCGTCGTGCACCCCTGTGTCAGGTACCTCTATTCCAAAATCAAATAAATCATACTCTGGGCTCTTCTCAACCTCATGATGTTTGGAAGGTTTCTCATCATCCGGCTAACTCGTCCCAACATATCTTCAGTAATAGGGGGCGTGGAAGGAGTCTTACAATCCCTCCCATTGATAACGTTCGCAATACAGATATAAACCAATATAATCTCCGACCTACGTCAAGGATGGTGTCTGCACTTGGTGCTAGTGTGGAGGCGCGCCCTTCAATTTTACCAGCATCTTTTGAAATAAGGCCATCTGTTAACATGAATGTCACTCGACCTCCTACCTTAAATCCAATAATGCCATTGCAAAAACATGCTCGGAGTCAGTTTGAAGCCATACATACAAGTAACCCTATTTTGAACCATGTTGTAAATAAATCTTCTTTTATACCAGAACAGTCTTTTGACAGTGTTGATAACAAGGATGCAAATGTTTCAAAGATACATCAGTTGCCTAATCAGCTACCTGGACTAATTTCGTCCAACAAGCAAAATCTTGGGCAAGCACCACAATTGCAGTTTAGTCATGGGAATTCTTTGCAAGGACATGGTGCTTCTATAAGTACAGCCATTTTGAATCCGTTACCTGTTATGCAATTCCCTTTACCAGTCCAAAGTATTGCAAACAACCCATTACAATTACAGGGTGGAGCCCATCCACCTCTACCACCAGGCCGCCCTCCTGCTCCATCTCAAATGATACGTCATCCAAATTCTGGTCCATTTATGTCAGGCCAACAGCCAACTGTAGGATATACTAATTTAATTAGTTCTCTAATGTCCCAAGGCGTGATCTCATTGACCAATCAGCTACCTGCACTGGATTCTGTTGGAACTGAGTTTAATCCAGATATTCTGAAGGTTCGTCATGAGTCTGCAGTCAATGCCTTGTATGGTGATCTCCCTAGACAATGCACGACTTGTGGACTGCGATTCAGATGCCAAGAGGAACACAGTAGTCATATGGATTGGCATGTGACTAAAAATCGGATGTCTAAAAGTCGTAAGCAGAAACCATCTCGTAAGTGGTTTGTGAGTGAGAGGATGTGGCTTAGTGGTGCAGAAGCATTGGGAACAGAATCAGCTCCAGGTTTTTTGCCTACAGAAACCATTGAGGAAAGGAAAGACGATGAAGAGTTGGCAGTGCCAGCAGAAGAGGACCAGAGTACATGTGCGTTATGCGGAGAGCCTTTTGATGGATTTTACAGTGATGAAATGGAGGAATGGATGTATAGAGGAGCTGTATACCTCTATGCACCTACGGGAACAACAGCAGGCATGGACAGGTCAGAGTTAGGCCCCATAATTCATGCTAAATGCAGATCGGAATCAAACGTAGCCCCCTCTGAAGATCTTGGGCTGGATGAAAAGGCAGCGGATGAAGAGGGTACTCAAAGGAAACGAATGCGGACTTGACTAAAATTGACCAGTTTTGTGCATTGTAACTTATGATTTTCCGTTAGTGTATCTTAGAGTAGAGTTGAATCTTGCAATGCCATGGCCATTCTGTACATGTATAGTTGCACCGGTAACGTGCATATTTTCTTGCAGTCCAAGGTTACATTTTACCTATTTCGTCCCATGCATTGTTGCCCCCAAATCAAAACGATTGGTATTACATTGTCATTTTTGGGACGGGGCGCATGATTTTAAACAATGCTGCGAGATGTTATCGGTTTCGATCTGATAAGTAGTTATTATACTGGCTACTAGTTAGGTGGTGTTAACATGGCGTACTAACAGGTAGTCACCGATTGTATTTTATAAAAAAGACTCATGCATAAATGAGAG 3375 0.4439 MFSQNLIPSPENPRPVAFPSKPMGNEIAIAAQKPPPSILVGRFKALLKQRDDELRLAAGLPVPAPSTDEIVQIYEILLSELTCNLKPIITDLTIIAEQQRDHAKGIADAICARILEVPADQKLPSLYLLDSIVKNFGQEYIRYFSLRLPEVFCEAYRQVQPSLHPAMRHLFGTWSKVFPPSVLRKIEAELQFSQEVNTQPSALNPVKASESPRPSHGIHVNPKYLRQLERSTVDSVGGDKLDSSGNANNTNFGFVAGKSHQFLSSRLGMSSSPSRVGLDGTLSASMDEYAVDNSAGRLIDRDTPHSAVDYGVTKTLGRDVELSEWQRKQYSGDRRNRFPTSITYSLSNGHQRQSPRALIDAYGSDKSQETSSSKPLLVERLDRNGIDNKVLSTSWQNTEEEEFDWEDMSPTLVDHSRNNSLLPSTVGFSRERPVVSANATLSEQGKSWSSGSQLPSIDDSSAIAEDAFASPAFRRAPLCQVPLFQNQINHTLGSSQPHDVWKVSHHPANSSQHIFSNRGRGRSLTIPPIDNVRNTDINQYNLRPTSRMVSALGASVEARPSILPASFEIRPSVNMNVTRPPTLNPIMPLQKHARSQFEAIHTSNPILNHVVNKSSFIPEQSFDSVDNKDANVSKIHQLPNQLPGLISSNKQNLGQAPQLQFSHGNSLQGHGASISTAILNPLPVMQFPLPVQSIANNPLQLQGGAHPPLPPGRPPAPSQMIRHPNSGPFMSGQQPTVGYTNLISSLMSQGVISLTNQLPALDSVGTEFNPDILKVRHESAVNALYGDLPRQCTTCGLRFRCQEEHSSHMDWHVTKNRMSKSRKQKPSRKWFVSERMWLSGAEALGTESAPGFLPTETIEERKDDEELAVPAEEDQSTCALCGEPFDGFYSDEMEEWMYRGAVYLYAPTGTTAGMDRSELGPIIHAKCRSESNVAPSEDLGLDEKAADEEGTQRKRMRT 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01436 958 MobiDBLite consensus disorder prediction 335 354 - -
Pste4g01436 958 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 53 946 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Pste4g01436 958 FunFam polyadenylation and cleavage factor homolog 4 63 191 - -
Pste4g01436 958 MobiDBLite consensus disorder prediction 929 958 - -
Pste4g01436 958 ProSiteProfiles CID domain profile. 66 194 IPR006569 -
Pste4g01436 958 MobiDBLite consensus disorder prediction 329 356 - -
Pste4g01436 958 SMART 558neu5 69 191 IPR006569 -
Pste4g01436 958 SUPERFAMILY ENTH/VHS domain 65 191 IPR008942 -
Pste4g01436 958 Gene3D - 63 191 IPR008942 -
Pste4g01436 958 CDD CID_Pcf11 74 191 IPR047415 -
Pste4g01436 958 ProSitePatterns Zinc finger C2H2 type domain signature. 792 812 IPR013087 -
Pste4g01436 958 Pfam CID domain 85 185 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01436 Pste-Chr4 10713333 10719579 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01436 731 958 C2H2 Transcription Factor Family AT4G04885 65.789 8.37e-99 327