Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01435 CGTAGAAGGCGCTGATCTGAGATGGGTGGGAAAAATGGTGAGGAAAAAAAACAAGATGACGCAAGCACGTCAGAGAATCGTGCAGAGACCAGCACGAATGGGGAAAAGGAAGAAAAGAGCAAACAAAAGGAAAAACAAGAGACAACTGTTCTCTTTTGCAGACTCCACTGACATTCTGTTGATGGTCGTTGGGACGCTTGGTGCTATTGGTAACGGTTTAGGTTTGCCTCTCATGACGTTGTTGTTCGGTCAAATGATTGATAGCTTCGGTAGTAACCAGGGAAACACTAACGTGGTGGAAGAAGTATCCAAGGTAAAAAGTCATAAACGCGTCTTGGTTTCTCTTAAATTTGTTTACTTGGCAGTAGGATCTGGGATGGCAGCGTTTCTCCAGGTGTCTTGTTGGATGGTCACGGGGGAGAGACAGGCTGCACGGATAAGGGGATTGTATTTGAAAACTATTCTGAGACAAGATGTTGCTTTCTTTGATAGGGAAACAAACACTGGAGAGGTGATAGGTAGGATGTCAGGTGATACAGTTCTCATACAAGATGCCATGGGAGAGAAGGTTGGGAAATTTCTGCAGCTAATAGCGACATTCTTTGGGGGATTTGTGATAGCATTTGTCAAAGGGTGGCTTCTTACTGTTGTCATGTTGTCCACTCTTCCACTTCTTGCTTTGTCCGGTGCTGTTATGGCAGTCATCATAGGCAGGATGGCTTCTCGAGGTCAAACAGCTTATGCAAAAGCTGCACATGTAGTTGAACAGACACTTGGCTCAATAAGAACCGTTGCATCCTTTACCGGGGAAAAGCAAGCGGTATCTAGTTATAGCAAATTTCTTGTAGATGCTTACAAATCAGGAGTTAATGAAGGTTTCATAGCTGGAGCCGGTTTGGGCACAGTTATGTTTGTTATCTTCGGCGGTTATGCTTTGGCTGTATGGTTTGGCGCAAAGATGATAATGGAAAAAGGATATAATGGTGGAACAGTGATTAATGTGATTATTGCCGTGCTAACTGCTTCAATGTCTCTTGGACAAGCATCCCCTAGCATGAGCGCTTTTGCTGCAGGTCAGGCTGCCGCTTTCAAAATGTTTCAGACAATTGAAAGGAAACCAGAGATAGATGCCTATGATCCAAATGGAAAAATATTAGAAGATATTCAAGGCGAAATAGAGTTAAGGGATGTTTATTTCAGTTATCCTGCAAGACCTGAGGAACTGATATTTAATGGATTCTCTCTTCATATACCTAGTGGTACAACTGCAGCTTTAGTTGGACAAAGTGGAAGTGGAAAATCCACGGTTATCAGCTTGGTAGAAAGATTCTATGATCCACATGCAGGTGAAGTTTTTATCGATGGCATTAACATAAAAGAATTTCAGCTTAGGTGGATCAGAGGAAAAATTGGCCTTGTCAGCCAGGAGCCAGTGTTGTTTGCCTCTAGCATTAAGGATAACATTGCATATGGAAAGGAGGGAGCAACTATAGAAGAGATAAGATCTGCATCTGAACTTGCAAATGCTGCTAAATTCATTGATAAGCTTCCGCAGGGATTGGATACAATGGTTGGTGAGCATGGAACTCAGCTGTCTGGGGGGCAGAAGCAACGCATTGCTATTGCAAGAGCAATCCTGAAAAATCCGAGAATTCTCCTTCTAGACGAAGCCACAAGTGCACTTGACGCAGAGTCTGAAAGGATCGTGCAAGAAGCTCTAGACAGGATCATGGTCAACAGAACTACTGTTGTAGTAGCACATCGCCTAAGCACTGTAAGGAATGCTGATATGATTGCTGTCATTCATAGAGGGAAGATGGTTGAAAAAGGAACGCACACAGAGTTACTCAAGGATCCGGAGGGAGCTTACTCTCAACTTATACGTCTTCAGGAAATAAACAAGGAGTCAAAAGAAAATGCGGACCATCACAAGAGTGAACATTCTATAGAATCCTTTAGACAATCTAGTCAAAGGAGATCACTTCAAAGATCTATCAGTAGGGGGTCATCCATAGGGAATAGTGGTCGCCATTCGTTTTCAGTTTCCTTTGGTTTACCCACAGGAGTTAACGTTTCTGATCCTGAACTTGTAAACTTACAACCCAAAGAACAAGCACCAGAGGTTCCCCTCAGCCGCCTTGCTTCCCTCAACAAACCAGAGATTCCGATTCTTCTGATTGGATGTGTAGCTGCCATAGCAAATGGTGTTATACTTCCAATATTTGGTTTGTTGATTTCCAGTGTCATCAAGACGTTTTATGAACCATTCGATGAGATGAAAAAGGACTCCAAGTTTTGGGCAGTGATGTTTATGGTGCTTGGTCTTGCATCATTTCTGGTAATTCCTGCACGGGGATACTTTTTTGCCGTGGCAGGATGTAAGTTAATCAAACGCATCAGGCATATGTGTTTTGAGAAGGTTGTCAACATGGAGGTTGGTTGGTTTGATGAGCCTGAAAACTCAAGCGGTGCCATTGGTGCAAGACTCTCTGCAGATGCTGCTTCTGTGCGTGCCCTTGTTGGTGATGCATTGGGACTATTGGTTCAAAATTTAGCATCTGCATTGGCAGGTTTGATTATTGCTTTCGTTGCATCTTGGCAGTTGGCATTGATTATTCTTGTCTTAATTCCCCTGATTGGAGTAAATGGCTATGTTCAAATGAAATTCATGAAAGGATTCAGTGCAGATGCAAAGATGATGTATGAGGAAGCAAGCCAAGTTGCTAACGATGCAGTTGGAAGCATAAGAACAGTTGCTTCTTTTTGTGCTGAAGACAAGGTAATGGAACTATACAGGAAAAAATGTGAGGGGCCTATGAAAACAGGGATCCGACAAGGGTTGATCAGCGGATCAGGATTTGGGGTTTCATTTTTCCTATTGTTTTGTGTGTACGCAACCAGTTTCTACGCAGGAGCCAGATTAGTGGACGCTGGAAAGACAACATTCTCAGATGTTTTCCGGGTTTTTTTTGCATTAACTATGGCAGCTATTGGAGTTTCTCAATCAAGTTCATTTGCTCCTGACTCTAGCAAAGCCAAGTCAGCTACTGCTTCCATATTTGGAATGATTGATAAGAAGTCAAAGATAGATCCGAGTGATGAGACTGGTACCACCCTGGATAGTGTTAAGGGAGAAATTGAGCTTCGTCATGTGAGCTTCAAGTATCCATCTAGGCCTGACATACAGATTTTCCGAGATCTCAGCTTAGCTATCCATTCTGGCAAGACGGTGGCTCTTGTGGGTGAAAGTGGAAGTGGCAAATCGACAGTGATTGCCTTGTTGCAAAGGTTTTATGATCCTGATTCAGGGCAAATCACACTTGATGGAATAGAAATTCGAGAGTTAAAGCTCAAGTGGTTACGGCAGCAGATGGGTCTTGTAAGCCAAGAGCCAGTTTTGTTCAACGAATGTATTCGTGCCAATATTGCTTATGGAAAAGGAGGTGATGCTACTGAAGCAGAAATCCTAGCTGCGGCAGAATTGGCCAATGCCCATAAATTCATTAGTGGCTTACAACAGGGTTATGATACTATAGTGGGAGAGAGGGGAACCCAATTATCTGGTGGGCAGAAGCAACGTGTAGCAATTGCTCGTGCCATAATTAAAAGTCCGAAGATATTGCTACTAGATGAAGCTACAAGTGCATTAGACGCTGAGTCAGAAAGAATTGTTCAAGATGCATTGGACAAAGTCATGGTGAACAGGACCACTGTGGTTGTCGCACATCGTCTATCTACAATAAAAAATGCAGATGTGATTGCTGTGGTAAAAAATGGAGTTATAGTGGAGAAAGGGAAACATGAAACACTCATTAACGTCAGTGGTGGATTTTATGCTTCCTTAGTCCAACTTCACACAAGTGCTTCAACCGTATGAGTTTTGCCTATTTGTCTAATTCCATTCTTCCTCCTTTTTATTTATTTTTTCTTTATTCTTCTTTCTTCCATATTGTTTATAAGTTCAACAAAAGATCAATACCTAATAATATTTGTTTACTTTTCATTTAAGAAAATTGATTCGTTTTATGATAAATCTAATGTAATATAATCACAACAAATAACCAAAAATATGTGAGAAAGATGG 4084 0.4194 MVRKKNKMTQARQRIVQRPARMGKRKKRANKRKNKRQLFSFADSTDILLMVVGTLGAIGNGLGLPLMTLLFGQMIDSFGSNQGNTNVVEEVSKVKSHKRVLVSLKFVYLAVGSGMAAFLQVSCWMVTGERQAARIRGLYLKTILRQDVAFFDRETNTGEVIGRMSGDTVLIQDAMGEKVGKFLQLIATFFGGFVIAFVKGWLLTVVMLSTLPLLALSGAVMAVIIGRMASRGQTAYAKAAHVVEQTLGSIRTVASFTGEKQAVSSYSKFLVDAYKSGVNEGFIAGAGLGTVMFVIFGGYALAVWFGAKMIMEKGYNGGTVINVIIAVLTASMSLGQASPSMSAFAAGQAAAFKMFQTIERKPEIDAYDPNGKILEDIQGEIELRDVYFSYPARPEELIFNGFSLHIPSGTTAALVGQSGSGKSTVISLVERFYDPHAGEVFIDGINIKEFQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKEGATIEEIRSASELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERIVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHRGKMVEKGTHTELLKDPEGAYSQLIRLQEINKESKENADHHKSEHSIESFRQSSQRRSLQRSISRGSSIGNSGRHSFSVSFGLPTGVNVSDPELVNLQPKEQAPEVPLSRLASLNKPEIPILLIGCVAAIANGVILPIFGLLISSVIKTFYEPFDEMKKDSKFWAVMFMVLGLASFLVIPARGYFFAVAGCKLIKRIRHMCFEKVVNMEVGWFDEPENSSGAIGARLSADAASVRALVGDALGLLVQNLASALAGLIIAFVASWQLALIILVLIPLIGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEDKVMELYRKKCEGPMKTGIRQGLISGSGFGVSFFLLFCVYATSFYAGARLVDAGKTTFSDVFRVFFALTMAAIGVSQSSSFAPDSSKAKSATASIFGMIDKKSKIDPSDETGTTLDSVKGEIELRHVSFKYPSRPDIQIFRDLSLAIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGQITLDGIEIRELKLKWLRQQMGLVSQEPVLFNECIRANIAYGKGGDATEAEILAAAELANAHKFISGLQQGYDTIVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERIVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHETLINVSGGFYASLVQLHTSASTV 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01435 1280 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 51 346 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g01435 1280 SUPERFAMILY ABC transporter transmembrane region 33 365 IPR036640 GO:0005524|GO:0016020
Pste4g01435 1280 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1035 1272 IPR003439 GO:0005524
Pste4g01435 1280 MobiDBLite consensus disorder prediction 1 34 - -
Pste4g01435 1280 MobiDBLite consensus disorder prediction 624 663 - -
Pste4g01435 1280 MobiDBLite consensus disorder prediction 18 34 - -
Pste4g01435 1280 FunFam ABC transporter B family member 1 1025 1275 - -
Pste4g01435 1280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 619 IPR027417 -
Pste4g01435 1280 FunFam ABC transporter B family member 9 37 377 - -
Pste4g01435 1280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1026 1272 IPR027417 -
Pste4g01435 1280 CDD ABC_MTABC3_MDL1_MDL2 1035 1273 - -
Pste4g01435 1280 FunFam ABC transporter B family member 1 693 1001 - -
Pste4g01435 1280 Gene3D ABC transporter type 1, transmembrane domain 104 1009 IPR036640 GO:0005524|GO:0016020
Pste4g01435 1280 Gene3D - 379 632 IPR027417 -
Pste4g01435 1280 FunFam ABC transporter B family member 9 1002 1024 - -
Pste4g01435 1280 Pfam ABC transporter 400 548 IPR003439 GO:0005524
Pste4g01435 1280 MobiDBLite consensus disorder prediction 643 663 - -
Pste4g01435 1280 Pfam ABC transporter transmembrane region 713 985 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g01435 1280 Pfam ABC transporter transmembrane region 51 332 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g01435 1280 Pfam ABC transporter 1054 1203 IPR003439 GO:0005524
Pste4g01435 1280 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 381 617 IPR003439 GO:0005524
Pste4g01435 1280 CDD ABC_6TM_Pgp_ABCB1_D1_like 50 342 - -
Pste4g01435 1280 FunFam ABC transporter B family member 1 371 620 - -
Pste4g01435 1280 CDD ABC_MTABC3_MDL1_MDL2 381 619 - -
Pste4g01435 1280 ProSitePatterns ABC transporters family signature. 1175 1189 IPR017871 GO:0005524|GO:0016887
Pste4g01435 1280 ProSitePatterns ABC transporters family signature. 520 534 IPR017871 GO:0005524|GO:0016887
Pste4g01435 1280 PANTHER ABC TRANSPORTER B FAMILY 17 622 IPR039421 -
Pste4g01435 1280 SMART AAA_5 1062 1255 IPR003593 GO:0016887
Pste4g01435 1280 SMART AAA_5 408 594 IPR003593 GO:0016887
Pste4g01435 1280 SUPERFAMILY ABC transporter transmembrane region 701 1019 IPR036640 GO:0005524|GO:0016020
Pste4g01435 1280 Gene3D - 1025 1279 IPR027417 -
Pste4g01435 1280 MobiDBLite consensus disorder prediction 624 642 - -
Pste4g01435 1280 CDD ABC_6TM_Pgp_ABCB1_D2_like 703 1018 - -
Pste4g01435 1280 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 714 1000 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g01435 1280 Coils Coil 615 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01435 Pste-Chr4 10710077 10715470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01435 36 1274 Calmodulin-binding Proteins AT2G36910 45.578 0.0 1064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01435 4 10710077 10715470 Pste4g01435 4 10710077 10715470 ECH