Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01432 GTTGGTGTTGAAAATTTGGATTCATCAGGAAGTGCTACTTATACACAAGCGGTAGCAGGCTTGGAACATAGTCGTTCCCTTAAAGAATTGTACTTGATAGACCTTTTGTCTGCATCTATGGGTGGCATTTCTACTAGCAGGTTAATAGAGAGAGACTCTCCTTATTCTGCTGTTGATTTTGGAGTAGCCAAAGCATTAAGTGGATATGTGGAGGTTAGTGAATGGCAGCGAAAACCAAAGCAGTATTCAGGTGAGGGTCGTAATCAGTTTCCAAGTTCAAGTTCCGTCACAGACAGATACAACCGCAGTCATGAACATGAGCATCAAAGTCCAAGAGCTTTAATTGATGCATATGGCCGTGACAAAAGGAAAGAAATTTCAAGCAGTAAGCCTTTGTTAGTTGAACCTATGGATATAAATGGCATAGAAGACGAAGTGTTGCCAACATCATGGCATAATACTGAGGAGCAGGAGTTTGATTGGGAAGATATAAATCCAACCTTAATAGACAACCACAGTAAGAATAGTTATTTATTGCCTTCAACTGTTGTTGCAGCCAATGCGACTTTGTCAGAGCAAGATGCTGGGAAAGGTGGTTTGTCTAGTGGCTCTCTGCTTCCTCCACTAGATGATTCTTCTGCTCTACCAAACGAAACTGCAGCCTCGGCTTCCATCTCGGTTGGTGAATCTTTTCGTGGTGCACCCCTGGGTCAAGTACCTGGATTCCAAAACCAAATCAAGCACAGTGTGGTCTCTCCTCAATCTCATGATGCTTGCAAGATTTCTCATCATCCCTCTAACTTGTCACAACACATCTTTAGAAAGAGGGAACGAGCAAGGAGTGATACGATTCCTCCTACTAATAAAATTCCATATTTGGTTCAGCATGCTGTAAGGATGGTTTTTGGCCTTGTCTTTGGTGATCAAGTTCGACCATCAGTTTTGCCAGTATCCTTTAAAACAAAAACTCCGATGGAAAAACATGTTAAGAGTCAGTTTGAACCCATACATACTAGTAATGCTACTGTGAACCATGTAGTAAATAAATCTTGGTTTATACCAGAACAGTCATTTAACAGTGTTGAGAACAAGGATGCAAATACTTATAAGGTACATCAGTTGCCTAATATCCTTCCTGGACTAATTTCGTCAAACCAGCAAGCACAATTTCAGGTTTTTCAATCAACCTCACAATTTATTCATGGGAGTTGTTTGCAGGGACATGGTGCTCTTATAAGTACAACCATGTCGAATCCGTTACCTGTTATGCAACCTGTTGGATATACTAATTTAATTAGTTCTCTAATGTCTCAAGGTGTGATTGTATTGCCAAATCAGCTGCTTGCACAGGATTCTATTGGAACTGAGTTTAATCGAGATATTCTGAAGGTTCGTCATGAGTGTGTAGTGAAAGGCTTGTATGGTGATCTCCCTAGACAATGCGAAACTTGTGGGCTCCGATTTAAAGGCCAAAAGGAACACAGCAGTCATATGGATTGGCATGTGACTAAGAATCGGAATCGGATATCTAAAAGCCATAAACAGAAACTGAAACCCTCTCGTAAGTGGTTTCTGAGTGAGAAAATGTGGTTTAGTGCCGCAGAGGCACTGGGAACAGAATCAGTTCCACGTTTTATGCTATCAGAAACCACAGAAGAAGAGAAAGATGATGTAGAGCTTGCAGTGGCAGCAGAAGATGAGCAGAAAACATGTGCATTATGTGGAGAGCCTTTTGATGAGTTTTACAGTGATGAAATGGAGGAGTGGATGTATAGAGGAGCTGCATACCTCTATGCACCCACAGGAACAATTACTGCAGGCATTGACAGATCACAATTAGGTCCCATAATTCATGCAAAATGCAGATCAGAATCTAATATGCAGTGTGCTGATAGGAAACGACTGAGGACTTGA 1914 0.4127 VGVENLDSSGSATYTQAVAGLEHSRSLKELYLIDLLSASMGGISTSRLIERDSPYSAVDFGVAKALSGYVEVSEWQRKPKQYSGEGRNQFPSSSSVTDRYNRSHEHEHQSPRALIDAYGRDKRKEISSSKPLLVEPMDINGIEDEVLPTSWHNTEEQEFDWEDINPTLIDNHSKNSYLLPSTVVAANATLSEQDAGKGGLSSGSLLPPLDDSSALPNETAASASISVGESFRGAPLGQVPGFQNQIKHSVVSPQSHDACKISHHPSNLSQHIFRKRERARSDTIPPTNKIPYLVQHAVRMVFGLVFGDQVRPSVLPVSFKTKTPMEKHVKSQFEPIHTSNATVNHVVNKSWFIPEQSFNSVENKDANTYKVHQLPNILPGLISSNQQAQFQVFQSTSQFIHGSCLQGHGALISTTMSNPLPVMQPVGYTNLISSLMSQGVIVLPNQLLAQDSIGTEFNRDILKVRHECVVKGLYGDLPRQCETCGLRFKGQKEHSSHMDWHVTKNRNRISKSHKQKLKPSRKWFLSEKMWFSAAEALGTESVPRFMLSETTEEEKDDVELAVAAEDEQKTCALCGEPFDEFYSDEMEEWMYRGAAYLYAPTGTITAGIDRSQLGPIIHAKCRSESNMQCADRKRLRT 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01432 637 MobiDBLite consensus disorder prediction 80 120 - -
Pste4g01432 637 MobiDBLite consensus disorder prediction 99 120 - -
Pste4g01432 637 MobiDBLite consensus disorder prediction 82 98 - -
Pste4g01432 637 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 76 627 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Pste4g01432 637 MobiDBLite consensus disorder prediction 194 216 - -
Pste4g01432 637 ProSitePatterns Zinc finger C2H2 type domain signature. 481 501 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01432 Pste-Chr4 10695324 10699194 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01432 340 637 C2H2 Transcription Factor Family AT4G04885 47.500 3.74e-82 274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01432 4 10695324 10699194 Pste4g01432 4 10695324 10699194 ECH