Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01431 AAACGCGTGGGATTCTCAACAAGCACAGTACACGGTGGGGGATATGTCACAACGCAGGATAACGTCGGAGAGTGATTTGGGAAGGAACCAAAACGATGAACCTGGCAACCATGAAACGAGGGAACCTATTCCTTCCGATGATGACGAGGACGACTACTACGAGGATGACGATGATTCCTACCAACCTTATAAGAGGAAACGCTACCACCGCCATTCACAGCACCAAATTCGGGAGATGGAATCCTTCTTCAAGGAGTGTCCCCACCCTGATGATAAACAAAGGAAAGAGCTTGGCCGCGAGCTCGGCCTGAACCCCTCGCAAATCAAATTTTGGTTCCAAAACAAACGCACCCAACTGAAGTCCGTGCATGAACGTCATGAGAACTGTGTTTTGAATGCTGAGAATGAAAAGCTTCGAGGAGAAAACAGTAGGTTGAAGGAGGCTCTAGCTAATGCTCCATGCCTTAGCTGTGGAGGCTCCTCAGGTCTTGGTGAAAGGTCCTTAGACGAGCAGCAGTTGAGGAAGGAGAATACGCGTTTAAAAGGAGAGATTGATAGAATATCAGGAACTGTGAGCATGTTGTATGCAGAAAAACAAGCGAATTGGTACGCACCACCACCACCTCAAAACCATATATCTTGGTACCCGCTGGACGCGGGACTTGGTAACACTGGAGCACAGGCTGCACCTTCAGGCATGTTAGGTGGCAATGACCCTACTAGGCCAACCCCAATTGCTACTTATTTTGACACTCGCATCATTACGGAAATTGGTATGGTAGCAATGGAGGAACTCTTAAGAGTGGCTCTGTCTGGAGAACCTTTGTGGGTCCCTGGCAACCACGGCACTGAGATTCTAAGCGAAGACGCATATCTCAGGATTTTTCCAAGAGGAATCGGTCCCTCACTATTGGGCGTAAAAACTGAAGCTTCCAGGCATAGTGACGTAGTATTCATCAATTCTTCTAAACTCGTTCAGATTCTTATGGATGTGAATCAATGGTCAAAAGTTTTCTGCAGTATCGTTTCAAAGGCAGTTATCCACGAAGTGTTGTCTACTGGAGCCGGATCAAGCTACGATGGAGCCGCTCATTTGATGTCAGCTGAATTCCAAATCCCGACGCCGTTACTTTCGGCTCGAGACAACCTCTTTGTCAGGTACTGTAAGAAACAAGAGGGACAATCATGGGCGGTGGTTGATTATTCCATGGATCATCTGCGACCTACTGCAATGACAAGAAGCAGAAGACGACCATCTGGTTGCTTAATTCAAGAAATGCCGAATGGTTACTCAAAGGTCACATGGGTTGAACATGTAGAATTGGAAGATAACGAGGTGCATGACCTTTACAAAATTTTGGTTAATTCTGGCCTAGCCTTTGGAGCAAAACGTTGGATGGCAGCGTTAGATCGACAATGCGAACGTCTTGCTAGTGCAATGGCCACCAACATACCCCAGGTGGACCTTTGTGGTGTGATAACAAGTCACGAGGGAAGAAAAGGTCTGCTGAAACTGGCGGAAAGAATGATAGTGGGGTTTTGTAATGGGGCCGGTGCTTCTACTGCACATGCTTGGACACTGCTAAAATCGGGTCTTGAAAATATAAGGTGCATGACCAGACAGAGTAAGGATGATCCAAGCAGACCTCCCGGTACAATTCTCAGTGCTGCAACTTCTCTCTGGCTCCCAGTACCTGCAAAGAGGGTTTTCGATTTTCTCCGAGATGAAACTTTCAGATATACGTGGGACATTCTCTCCTCCGGTGGTTCAGTTCACGAATTGGCGCACATTGCCAATGGTCAAAATCATGACAACTATGTATCTTTGCTCCGAGTGAATAGTCTGAATAGCGCCCACGGCAACATGCTTATACTACAAGAGAGTTGCACGGATGCAACAGGCTCGTTTGTGGTTTATGCTCCTCTTGATATAGCTGCCATGAATGTTGTGTTGGGTGGTGGTAACCCAGATTATGTGGCCCTGCTCCCGTCGGGCTTTGCTGTTCTCCCTGATGGGCCTGAACTGGGTAACACAGGGCCCATCCGCGAGGTTGGATCTGGAGGTTGTCTTTTGACAGTTGCATTTCAGATACTGGTTGATTCAATCCCAACTTCGAAACTTTCCGCTGGTTCAGTTAACACAGTGTACACCTTAATCAACAACACAGTTGACAAGATCAAAACTGCAGTTTCACTCGACACC 2203 0.4725 MSQRRITSESDLGRNQNDEPGNHETREPIPSDDDEDDYYEDDDDSYQPYKRKRYHRHSQHQIREMESFFKECPHPDDKQRKELGRELGLNPSQIKFWFQNKRTQLKSVHERHENCVLNAENEKLRGENSRLKEALANAPCLSCGGSSGLGERSLDEQQLRKENTRLKGEIDRISGTVSMLYAEKQANWYAPPPPQNHISWYPLDAGLGNTGAQAAPSGMLGGNDPTRPTPIATYFDTRIITEIGMVAMEELLRVALSGEPLWVPGNHGTEILSEDAYLRIFPRGIGPSLLGVKTEASRHSDVVFINSSKLVQILMDVNQWSKVFCSIVSKAVIHEVLSTGAGSSYDGAAHLMSAEFQIPTPLLSARDNLFVRYCKKQEGQSWAVVDYSMDHLRPTAMTRSRRRPSGCLIQEMPNGYSKVTWVEHVELEDNEVHDLYKILVNSGLAFGAKRWMAALDRQCERLASAMATNIPQVDLCGVITSHEGRKGLLKLAERMIVGFCNGAGASTAHAWTLLKSGLENIRCMTRQSKDDPSRPPGTILSAATSLWLPVPAKRVFDFLRDETFRYTWDILSSGGSVHELAHIANGQNHDNYVSLLRVNSLNSAHGNMLILQESCTDATGSFVVYAPLDIAAMNVVLGGGNPDYVALLPSGFAVLPDGPELGNTGPIREVGSGGCLLTVAFQILVDSIPTSKLSAGSVNTVYTLINNTVDKIKTAVSLDT 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01431 720 Coils Coil 117 137 - -
Pste4g01431 720 CDD START_ArGLABRA2_like 239 460 - -
Pste4g01431 720 MobiDBLite consensus disorder prediction 1 15 - -
Pste4g01431 720 Gene3D - 299 466 IPR023393 -
Pste4g01431 720 ProSiteProfiles START domain profile. 233 464 IPR002913 GO:0008289
Pste4g01431 720 SMART START_1 242 461 IPR002913 GO:0008289
Pste4g01431 720 SUPERFAMILY Bet v1-like 239 463 - -
Pste4g01431 720 Gene3D - 38 121 - -
Pste4g01431 720 SUPERFAMILY Homeodomain-like 43 111 IPR009057 -
Pste4g01431 720 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 47 716 IPR042160 -
Pste4g01431 720 CDD homeodomain 50 106 IPR001356 GO:0003677
Pste4g01431 720 MobiDBLite consensus disorder prediction 1 58 - -
Pste4g01431 720 Pfam START domain 247 461 IPR002913 GO:0008289
Pste4g01431 720 Pfam Homeodomain 51 106 IPR001356 GO:0003677
Pste4g01431 720 FunFam Homeobox-leucine zipper protein HDG1 38 124 - -
Pste4g01431 720 ProSiteProfiles 'Homeobox' domain profile. 48 108 IPR001356 GO:0003677
Pste4g01431 720 SUPERFAMILY Bet v1-like 483 712 - -
Pste4g01431 720 SMART HOX_1 50 112 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01431 Pste-Chr4 10677421 10681898 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01431 7 720 Homeobox Transcription Factor Family AT4G04890 59.310 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pste4g01431 START 1.3e-45 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01431 4 10677421 10681898 Pste4g01431 4 10677421 10681898 ECH
Pste4g01431 4 10677421 10681898 Pste1g00771 1 2412925 2418027 ECH
Pste3g02608 3 19030992 19037998 Pste4g01431 4 10677421 10681898 ECH
Pste1g00771 1 2412925 2418027 Pste4g01431 4 10677421 10681898 PCT