Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01419 CTCATCTCTAAAGGACCGAGGATAGAGTAGAAGAGGGTGCACTATAGCAGTAGCAGACGCCTCTCTTTGTTTCTTCTCTGCATCTATCAGTGACAGTAAAAATGGAAAACCACGACCCACGCCATGAGTTGACCTTACTTAGATCCACCGATTCCCTTCGCCAGGAACTCAATCCAACCGTCAACGCCAAAGTACATGTTCATTCACCCATCCCAGAAGTCGATTTTTTCTCACTGCCAAAGAATACCGACACTGATAATAATGTTAACCAGAAACAGCCTCATCAAGAGGACCCGCACCATCGTCATACCAACGTGCTCAAAGACCTCGTTGACACTGCACTCAACCTAAATCTAACTTGTCCCACTTCTGACTTGTCAAAATCAGCAGCAAAGGATGAAAATCTTCGAATTCTGCTGAATACACTCCAAAAGGAACTACTTAGAGTGCAAGAAGAAAATTGCAAGTTGAAAACTATGTTGGACCAAATCACCAAAAATTATCACCAGCTACAATTGTTCGTTGCTTTGCAGAAGCAGAAGCCATACCAGAAGATGGAGACAAATGGAATGATGTGTGGTCAACATTTATTGGACGCACGACCACGCACCAAATTAGACGCTAAAGTAGCATCATTTCCTGATGATACATCTGGTCAAGAGGGTCATCCTGATCCTGTTGAAGATGCCATTGAACAATCATCCTCACAGAGTTGGGGGTCGTCCAAGAGTCCCAAATTTGAAGAGTCCAAGCCTAGTGAGCTTCCTTTCAAGAAAACCAGGGTTTCAGTTCGTGCAAGATCAGAAGCTCCTCTTATTAGCGACGGATGTCAATGGAGGAAATATGGACAAAAAATAGCCAAGGGTAATCCTTGTCCCCGAGCCTATTACCGTTGCACTATGGCCGTAGGATGCCCAGTTCGTAAGCAGGTGCAAAGATGCATAGAAGACAAAACGGTGTTGATAACAACCTATGAAGGCAATCATAACCATCCTCTCCCACCCTCAGCCACGGCCATGGCCAATTCAACCTCAGCAGCTGCAGCTATGTTCTTATCCTCATCAGGTTCAACAAGTGCAGGAGCATTCTCTTCTATGCCCTACATCCCAATGGCAACCCTATCAGCCTCTGCACCTTTTCCCACTATCACCCTTGACATGACCACCAACCCTATGCAATTGCACCGAGTTCCCTCGCCTGTATTCACATCCTCTCTTCCATTGCATGCATCTACTTTTCCTCAGCTACTAGGACACCCCATCATGCTCCCCCACAAAGTGACACATTTACTAGACCAACAACAACCTTCCTTTATGACTGAGACTATGACTGCAGCTATTGCTTCCAATCCAAATTTCACTGTAGCATTAGCAGCAGCCATCTCATCAATTATTGGAGGCAATGATGGAAACAACAACAATGCTGCAAGCGTTCTTCCCCTTAATGGGGCATCTATCTTACCAGGATCTACTTAGGCTTCATAATCATGCATAGTCATACTCATACACTACACACCGATCGAGACACAAACTAGCTCGTATACATGAATTTGGCTAGCTTAAAAGTTTGTAGCACAATATATACATAGATAGTATTTCTATGTATAGAGTGCAAAGATAGCTTGTATATACGCGAGTAGAAAACCTTCGTCACACTGCACACATATCCGTAAAAGTGTCACATACATGTGAGCAAAGTGCTAAAAACAAAAAACTTTTCAGACCATGCCCGTGGCAAAATCCACGGTATTGTGATTAATGCTTTAACATAAAAAAGATCTCTGTGTCAATTATTACATAAGTGTGTAGAACACACTAAACAAATAAATC 1829 0.433 MENHDPRHELTLLRSTDSLRQELNPTVNAKVHVHSPIPEVDFFSLPKNTDTDNNVNQKQPHQEDPHHRHTNVLKDLVDTALNLNLTCPTSDLSKSAAKDENLRILLNTLQKELLRVQEENCKLKTMLDQITKNYHQLQLFVALQKQKPYQKMETNGMMCGQHLLDARPRTKLDAKVASFPDDTSGQEGHPDPVEDAIEQSSSQSWGSSKSPKFEESKPSELPFKKTRVSVRARSEAPLISDGCQWRKYGQKIAKGNPCPRAYYRCTMAVGCPVRKQVQRCIEDKTVLITTYEGNHNHPLPPSATAMANSTSAAAAMFLSSSGSTSAGAFSSMPYIPMATLSASAPFPTITLDMTTNPMQLHRVPSPVFTSSLPLHASTFPQLLGHPIMLPHKVTHLLDQQQPSFMTETMTAAIASNPNFTVALAAAISSIIGGNDGNNNNAASVLPLNGASILPGST 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01419 457 Coils Coil 99 119 - -
Pste4g01419 457 Pfam WRKY DNA -binding domain 241 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste4g01419 457 MobiDBLite consensus disorder prediction 196 212 - -
Pste4g01419 457 SMART WRKY_cls 239 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste4g01419 457 MobiDBLite consensus disorder prediction 178 225 - -
Pste4g01419 457 ProSiteProfiles WRKY domain profile. 234 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste4g01419 457 Gene3D WRKY domain 224 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste4g01419 457 MobiDBLite consensus disorder prediction 46 67 - -
Pste4g01419 457 FunFam probable WRKY transcription factor 31 224 301 - -
Pste4g01419 457 SUPERFAMILY WRKY DNA-binding domain 232 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste4g01419 457 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 93 441 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01419 Pste-Chr4 10622702 10626714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01419 76 431 WRKY Transcription Factor Family AT4G04450 41.093 4.12e-78 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste4g01419 WRKY 8e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01419 4 10622702 10626714 Pste4g01419 4 10622702 10626714 ECH
Pste5g02872 5 21394989 21399627 Pste4g01419 4 10622702 10626714 PCT