Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01387 AGCTTTGAAGGTCTGAAGTAACTATTTTTGGGTGGGTTGCGAAACATACCGAAGGTCATAAATCCAAGACTGAATATCGAACCAACCACGGTGTGGGAAGAAGATCTTCTGCTTTGAAAGATTAACACTTCAACTAATGGACATAAACTCTACGTTGGGTTGGAGTTACTTCAAGTTTCTCTTTGTCTTTATCCTTGTGAGATTCCTCTGTTTTGCAACAACTCAAGCTCAGGTTCCCACTTTTCTTCACCAGAACTGCTCAACCAACAGAACCACAGCTGACAGCGTCTTCCAAATAAACCTGAAGACTCTGGTTTCTTCACTATCTTCCAACGCCACCGCCAAGAATGAATTCCACAACGCCACAGTGGCGGGAACAAAGCCCTCTGACACAGTGTACGGACTTTACATGTGCAGGGGTGACGTTCCGTTTGAGCTATGTGCACAGTGCGTGGTAAACGCAACACAGAAACTATCATCTGACTCGGAGTGCTCCTTGTCCAAACAGGCTGTGATCTGGTACGACGAGTGCATGGTTAGGTACTCCAACCGCTCCTTTTTCTCCACCGTAGACACAACTCCACGTGTTGGCTTGTTGAACACTGCCAATATCTCAAACCAGGAAAGCTTCATGCGTTTGCTGTTCGACACCATGAATGAAACTGCAGATGAAGCAGTGAGTGCTCCAAACGGGGCCGAGAAATATGCCACCAATGAAGCAAACATATCTGGCTTTCAAACCCTTTATTGTCTGGTTCAGTGCACGCAGGACTTGTCACCCCAAGGTTGCAGAACTTGTCTCAGTGTTGCCATAGGCCAACTTTCATGGTGCTGTCTAGGAAAACAAGGAGGGAGAATTCTAAACCCTAGCTGTAATGTTAGGTATGAATTGTACCCTTTCTACCGCTCCGACACCGCTGTTTCCGCACCATCGCCTGAGCCATCAGGGTTTCTTCCTCCAACCGATTCTTCTAATTCAGGAGGAAGTAGTGTTATTTCATCGCGGACAATAGTTGCAATTGTGGTTCCAATTACAGTGGCTGTACTGATATTTATTGTTGGCATTTGGCTCTTAAGTAAAAGAGCAGCAAAGAAGCGTAACTCTACACAAGACCCAAAAACCGAAACTGAAATCAGTGCTGTGGAATCCTTGAGATTTGATTTCAGTACAATTGAAGCAGCCACTGAGAAATTCTCTGATGCTAACAAGCTAGGTGAAGGGGGATTTGGTGAGGTTTACAAGGGCTTGCTTCCCAGCGGGCTAGAAGTGGCTGTCAAGAGACTCTCTAAAAACTCTGGACAAGGTGGAACAGAATTTAAAAATGAAGTAGAGGTGGTTGCAAAGCTTCAACACAGAAATCTGGTGAGGCTTCTAGGATTTTGCTTGGAAGGAGAAGAAAAGATACTTGTTTATGAATTTGTAGCCAACAAAAGCCTTGACTATATTCTTTTTGAACCTGAAAAGCAAAGATCATTGGATTGGACAAGGCGTTACAAAATTGTTGAAGGGATTACTCGAGCCATTCAATATCTTCATGAAGATTCTAGGCTTAAAATCATACACCGCGATCTTAAAGCTAGCAATGTATTGTTGGATGGAGATATGAATCCAAAAGTCTCTGATTTTGGCATGGCAAGAATATTTGGAGTGGATCAAACTCAAGCAAATACAAATAGGATTGTGGGGACATATGGTTACATGTCTCCTGAGTATGCAATGCATGGACAATACTCTGTTAAGTCTGATGTATACAGTTTTGGAGTCCTCATTTTGGAGATTATAAGTGGCAAGAAGAACGGCTCTTTCTATGAAACAGATGCTGGTGAGGATCTATTGGGCTATGCCTGGAAACTTTGGAAGGATGAAACACCCTTGGAGTTGTTGGACCACTCATTAAGAGAATCATATGCTCCAAATGAAGTTATCAAATGCATCCATATTGGTTTACTCTGTGTCCAAGAAGATCCAATAGATAGACCTACAATGGCATCAGTAGTTCTTATGCTTGATAGTTATTCTGTTACTCTTCCGGCACCTAATCAGCCTGCATTCTATATACATGGTAGGACTGAACCAAACATGCTAAAAGGGCTTAAAATTGATCAGTCTACTATCAATTCAACATCAAAGTCAATCAATGAGATGTCAACAAGTGAAATCCCCAAGATGCCCCCTTCCAACTACTTGGTAATTCCCTTGCTTTTCTTTTTCTTCCTCTTTAGCCCCCTATTATTCTCAACCAAAGCAACTGCAATTTACAGTTCCCATGTCTGCACAGACTCTAACAAATACCAAGCAAACAGCACATTCCAGAGCAACCTCAACCTCCTCCTCTCTTCCCTTTCTTCCAACGCCACCGAAGGCTCCCACTTCTACAGAACAACAATTGACAGCGACACCACCAACGCCATCAACGGCCTCTTCCTCTGCCGCGGCGACACCGTCACCGCCACATGCTACGACTGTGTCACCGCCGCAGCCGGAGACCTAAAACGCCGGTGCCCGGTTGAGAAAGAGGCCATAATCTGGTACGACGTGTGCATGGTACGGTATTCCAACCAATATTTCAACTACATAGTACCCGGAGTGGACATGTCTGATTCCAAAAGCGTTGCCAGCGCTGATCTTGACCGGTTCAATGAGTTTCTCGCGGGATTGCTGAATTCTCTGGCAACGGAAGCTTCAAATTCCGCGGATGAGAAATTTGCAACAGGGGAAGTGAAGTTCAATACTTCAGTGACCCTCTATGGATTGGTGCAGTGCACGCCAGAGTTGTCCTTGTTTGATTGCAACATGTGTTTCAGAAGCGCCATTGCGTCTGTTCCTAATTGTTGTGATGGAAAACGAGGTGCAAGAGTGTTGCTTCCAGGATGCAATATCAGATATGAAGAGTATCCATTTTACAATAGCACTAAAATATTGTCCCCGCCGGTTCAAAAGTCTCGTCCTTCAGGTCGTAGTCGCGTTGAAGTGATTCTTACATTTGCTATCCCTATTGTTGCTGCCATGGTACTTTTCACTTTTGGCATATGTTCTGTCATGAGAAAGCAAACAAAGAGTGTGATACAATTATGGAGGAAAACGAATTGTTCTGAGACGTAGATGATACTGATGCTGCAACTCTCGGGGATAAGAGATAGTTATCAAACCAAGAGTTTAAGCTTGATTATTTTCCATTTTGTATGCTTAATATGGAAGGGTGTAATGCAAGACAAGCTTGTAAAAAAAAACGTAGGATTGTATAGTGATGAAGTAATCTGATCTGATGCACGCCTATGTTTGGGTTTAGCTCAAGTGGCTAGGCCGTTCTATGCTATCGTTTTTGTCATTCGAACCCGTGAAAGACCGCTGCTTCTTATCATTCAACAGGCAATTTGGCACTACCATGTAGATTAATGAACTATAGCCTCAGGCCCTCAGCAAGTTTTGATTTTGTCGTGAGATTGGAGCAGTAGTTTGCTGTATACTTTGTCATTCTTTAGATGTAAAAATATAATATAATGCATGTTTAGGGTTCAGTTGAGAGTGTTCGAAAATATTTTTA 3545 0.4319 MDINSTLGWSYFKFLFVFILVRFLCFATTQAQVPTFLHQNCSTNRTTADSVFQINLKTLVSSLSSNATAKNEFHNATVAGTKPSDTVYGLYMCRGDVPFELCAQCVVNATQKLSSDSECSLSKQAVIWYDECMVRYSNRSFFSTVDTTPRVGLLNTANISNQESFMRLLFDTMNETADEAVSAPNGAEKYATNEANISGFQTLYCLVQCTQDLSPQGCRTCLSVAIGQLSWCCLGKQGGRILNPSCNVRYELYPFYRSDTAVSAPSPEPSGFLPPTDSSNSGGSSVISSRTIVAIVVPITVAVLIFIVGIWLLSKRAAKKRNSTQDPKTETEISAVESLRFDFSTIEAATEKFSDANKLGEGGFGEVYKGLLPSGLEVAVKRLSKNSGQGGTEFKNEVEVVAKLQHRNLVRLLGFCLEGEEKILVYEFVANKSLDYILFEPEKQRSLDWTRRYKIVEGITRAIQYLHEDSRLKIIHRDLKASNVLLDGDMNPKVSDFGMARIFGVDQTQANTNRIVGTYGYMSPEYAMHGQYSVKSDVYSFGVLILEIISGKKNGSFYETDAGEDLLGYAWKLWKDETPLELLDHSLRESYAPNEVIKCIHIGLLCVQEDPIDRPTMASVVLMLDSYSVTLPAPNQPAFYIHGRTEPNMLKGLKIDQSTINSTSKSINEMSTSEIPKMPPSNYLVIPLLFFFFLFSPLLFSTKATAIYSSHVCTDSNKYQANSTFQSNLNLLLSSLSSNATEGSHFYRTTIDSDTTNAINGLFLCRGDTVTATCYDCVTAAAGDLKRRCPVEKEAIIWYDVCMVRYSNQYFNYIVPGVDMSDSKSVASADLDRFNEFLAGLLNSLATEASNSADEKFATGEVKFNTSVTLYGLVQCTPELSLFDCNMCFRSAIASVPNCCDGKRGARVLLPGCNIRYEEYPFYNSTKILSPPVQKSRPSGRSRVEVILTFAIPIVAAMVLFTFGICSVMRKQTKSVIQLWRKTNCSET 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01387 988 Gene3D Transferase(Phosphotransferase) domain 1 429 632 - -
Pste4g01387 988 FunFam cysteine-rich receptor-like protein kinase 10 429 631 - -
Pste4g01387 988 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 706 811 - -
Pste4g01387 988 ProSiteProfiles Gnk2-homologous domain profile. 147 255 IPR002902 -
Pste4g01387 988 Pfam Salt stress response/antifungal 713 809 IPR002902 -
Pste4g01387 988 Pfam Salt stress response/antifungal 158 253 IPR002902 -
Pste4g01387 988 Pfam Salt stress response/antifungal 41 138 IPR002902 -
Pste4g01387 988 Pfam Salt stress response/antifungal 830 920 IPR002902 -
Pste4g01387 988 SUPERFAMILY Protein kinase-like (PK-like) 338 643 IPR011009 -
Pste4g01387 988 Gene3D Phosphorylase Kinase; domain 1 313 428 - -
Pste4g01387 988 ProSiteProfiles Gnk2-homologous domain profile. 814 922 IPR002902 -
Pste4g01387 988 Gene3D - 149 255 IPR038408 -
Pste4g01387 988 Gene3D - 33 141 IPR038408 -
Pste4g01387 988 Gene3D - 819 922 IPR038408 -
Pste4g01387 988 Gene3D - 705 811 IPR038408 -
Pste4g01387 988 ProSiteProfiles Protein kinase domain profile. 353 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01387 988 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 34 140 - -
Pste4g01387 988 FunFam Cysteine-rich receptor-like protein kinase 25 149 255 - -
Pste4g01387 988 ProSiteProfiles Gnk2-homologous domain profile. 707 811 IPR002902 -
Pste4g01387 988 FunFam Cysteine-rich receptor-like protein kinase 10 315 428 - -
Pste4g01387 988 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Pste4g01387 988 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 35 673 - -
Pste4g01387 988 Pfam Protein tyrosine and serine/threonine kinase 357 622 IPR001245 GO:0004672|GO:0006468
Pste4g01387 988 CDD STKc_IRAK 359 625 - -
Pste4g01387 988 ProSiteProfiles Gnk2-homologous domain profile. 34 141 IPR002902 -
Pste4g01387 988 FunFam Cysteine-rich receptor-like protein kinase 10 817 922 - -
Pste4g01387 988 SMART serkin_6 353 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01387 988 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01387 Pste-Chr4 10311726 10317691 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01387 689 972 Receptor kinase-like Gene Family AT4G05200 38.411 2.29e-55 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste4g01387 PK_Tyr_Ser-Thr 9.8e-47 CL0016