Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01384 TGTTATTTTGCAGTGCCCATGAGAGAGAGAGAGAGAGATGTGCATCTTGAAGGCCTCTTCAAAAGTGGTGCTGGTCCTGTCTCTGTTGACCTTTGCAAGTGAGGCAGCTCCTACATACAGCTCTCATGCCTGCACAGATGATGGGCCCCATTACTCATCAAACTCAACATACCAGACCAACTTGAACCTCCTCCTCTCATCCCTTGTCTCCAACGCCACCCTCCACCAAGGTTTCTACCTCACCAACATCTCCCTCGGAGACCCCGGCGAGGTCAAGGGTCTCTTCCTCTGCCGCGCTGACGTCACCCCCTCTCTCTGTCACGACTGCGTCACCGCCGCTGCTCATAACATCACCCAACTCTGCACCAATCAATCAGAGTCCATCATCTGGTACGACCAATGTACGCTGCGTTATTCCAACCTTTCCTTCCTCAACAACATAGTCCCCGGAGTCAACCTTATGTCCACCCAGAGCCTCCCTCACTCCGACACTACCCGCTTCAACACTTTTCTCGCCTCCACGTTGAATGATCTTGCCAAACAAGCCCTCAATTCTGCTTCTGCTAAAATGTTTTCTACTAAAGAAGCCAATTTCACTACCTCAATCACTCTCTACACCCTCGCACAGTGCAGGCCCGATTTGTCCACCTTTGACTGTAACATGTGCTTCTCAAGCGCCATCAGTACCCTCGGTGGCTCTAAACTAGGTGCCCGCTCCCTGCTTCCCAGTTGTAATGTCAGATATGAATTCTACCCTTTTTACAATGTTTCCGCCCTTTCCACTCAACCGCTGTTTCAAACCCCTTCTTCAGGAAAAAGCAGTATCTCTATAATTGTCGCCATTATTGTTCCAATTGTTGTTGCCATTGTACTTTTCGTTGTTGGCGTCTACTTCCTACGTAGAAGGGCAACCAAGAAGCATAATCCTTTTGTCCAGGATTCAATTGTCGATGATCTTGGCGATGTGGAGTCCTTGCAATTTGACTTGGCTACGGTTGAAGCTGCCACAAACAGATTCTCGAATGACAGAAAGATTGGCCAAGGTGGATTTGGGGTGGTTTATAAGGGCATCCTCCCTAATGGACAGGAGATAGCAGTGAAGAGGTTGTCAGTAACCTCCTTGCAGGGTGCACTAGAGTTCAGAAATGAAGCAGCCCTCGTGGCCAAGCTTCAACATAGAAATTTAGTGAGACTACTAGGATTTTGCTTGGAGGGGCAGGAAAAGATCCTTATCTATGAATACATACCAAACAAAAGCCTTGATCACTTTCTATTTGATCCTACAAAGCAAAGGCAGTTAGATTGGTCGCAACGCTACAAGATTATAGATGGCATTGCACGAGGAATTCTTTATCTACATGAAGATTCTCAGCTAAGAATCATACACCGTGATCTCAAAGCTAGCAATGTTTTATTAGATGAAAATATGAACCCAAAGATTTCAGATTTTGGCATGGCAAAGATTTTCCAGGCAGATCAGACTCAAGTAAATACAGGAAGGATAGTTGGGACTTATGGTTACATGTCTCCAGAGTATGCAATGCGAGGACAATTTTCTGTGAAATCAGATGTGTTTAGCTTTGGTGTCTTAGTTTTGGAGATTGTGAGTGGCAGGAAGAACACTGATTTTTATCAATCAAATCATGCCAATGACCTTTTGAGCTATGCTTGGAAATGTTGGACAGGGCAAACACCTTTGGAGTTTCTGGATCCAACTCTCAGAGGTTCTTATTCAAGAAATGAAGTGAACAGATGCATCCATATGGGTTTATTATGTGTTCAGGAAAATCCATCCGATAGACCTTCATTGGCCACCATTGCACTTATGCTGAACAGTTATTCAGTTACCTTGTCAATGCCACGACAACCAGCTTCTTTTCTGCGCAGAAACACTCCTAACAGGCTAAACCAAGGGCAGCTTGACTCTGATCAGTCTACCACCGATCAGTTTACCAGCCGTTCAATTCCATGGTCGGTGAATGAAGTATCCATTACTGAAGTATGCCCTCGCTAAAGGATTATTTTAATGTTTTCTTCAATCAATCCAGTGGGTTCAAATCTTGTTAAACTATGGTGCTGCTTTTGTTCGACCCTAGTGGATACACATTGTAAATACATATTAATAGCTAAAAGAATTCTGTCCGATACCCGATGGATGAACATGTAGAGTAGCTAAAGCATGATGCCCCGGGAGAGAGTAATTTGCAATCTACTCAAGTAAGTATGACTTGAAATCCCAAATTGACTAGAAATTGGAAACCGATGGATATCTAAGAACTGAGAAAGACTATCAACCCAATACTTTAAGCTTTTAGTTTAAAAATGATGTCACGTTTTTCTATG 2343 0.4405 MCILKASSKVVLVLSLLTFASEAAPTYSSHACTDDGPHYSSNSTYQTNLNLLLSSLVSNATLHQGFYLTNISLGDPGEVKGLFLCRADVTPSLCHDCVTAAAHNITQLCTNQSESIIWYDQCTLRYSNLSFLNNIVPGVNLMSTQSLPHSDTTRFNTFLASTLNDLAKQALNSASAKMFSTKEANFTTSITLYTLAQCRPDLSTFDCNMCFSSAISTLGGSKLGARSLLPSCNVRYEFYPFYNVSALSTQPLFQTPSSGKSSISIIVAIIVPIVVAIVLFVVGVYFLRRRATKKHNPFVQDSIVDDLGDVESLQFDLATVEAATNRFSNDRKIGQGGFGVVYKGILPNGQEIAVKRLSVTSLQGALEFRNEAALVAKLQHRNLVRLLGFCLEGQEKILIYEYIPNKSLDHFLFDPTKQRQLDWSQRYKIIDGIARGILYLHEDSQLRIIHRDLKASNVLLDENMNPKISDFGMAKIFQADQTQVNTGRIVGTYGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVSGRKNTDFYQSNHANDLLSYAWKCWTGQTPLEFLDPTLRGSYSRNEVNRCIHMGLLCVQENPSDRPSLATIALMLNSYSVTLSMPRQPASFLRRNTPNRLNQGQLDSDQSTTDQFTSRSIPWSVNEVSITEVCPR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01384 658 SMART serkin_6 327 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01384 658 FunFam Cysteine-rich receptor-like protein kinase 10 138 241 - -
Pste4g01384 658 Pfam Salt stress response/antifungal 150 238 IPR002902 -
Pste4g01384 658 Pfam Salt stress response/antifungal 32 128 IPR002902 -
Pste4g01384 658 Gene3D Transferase(Phosphotransferase) domain 1 403 610 - -
Pste4g01384 658 FunFam cysteine-rich receptor-like protein kinase 10 403 605 - -
Pste4g01384 658 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 25 131 - -
Pste4g01384 658 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 288 402 - -
Pste4g01384 658 ProSiteProfiles Gnk2-homologous domain profile. 137 241 IPR002902 -
Pste4g01384 658 Gene3D - 139 241 IPR038408 -
Pste4g01384 658 Gene3D - 25 131 IPR038408 -
Pste4g01384 658 Pfam Protein tyrosine and serine/threonine kinase 329 595 IPR001245 GO:0004672|GO:0006468
Pste4g01384 658 Gene3D Phosphorylase Kinase; domain 1 290 402 - -
Pste4g01384 658 CDD STKc_IRAK 333 599 - -
Pste4g01384 658 SUPERFAMILY Protein kinase-like (PK-like) 313 620 IPR011009 -
Pste4g01384 658 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 21 654 - -
Pste4g01384 658 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Pste4g01384 658 MobiDBLite consensus disorder prediction 614 639 - -
Pste4g01384 658 ProSiteProfiles Gnk2-homologous domain profile. 27 131 IPR002902 -
Pste4g01384 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Pste4g01384 658 ProSiteProfiles Protein kinase domain profile. 327 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01384 Pste-Chr4 10298487 10301801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01384 10 658 Receptor kinase-like Gene Family AT4G05200 49.107 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste4g01384 PK_Tyr_Ser-Thr 1e-48 CL0016