Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01372 CTTCTTCGTTCTTCTCTCCTTAATACGAAGCTATAGTTCATTGTTTGGGGGCATTAATTAACCAAAGAAACGCAACTTTCTGTATTCTTCTGTTCTGCCAACTCTGCATTCTTGTGTGGAGCGGAAGCAGAGCCAGAATGAGCAACCTCTGCATTGTTGCAGCACTTGTTTTCAGCTTCTGGGTTGATGCCTTTTCAGCCTATCAATATCGCCACTTCAATGAAACCCAGTTTTCTTTGCACGAGGCTAAGGAACAGACACATTCGTCCCTTTTTGGGAGGATTCCTCTCATGGTGGGACTCACCCTTATTCAAGGCGCTGCTGCCAAAGGAGCAGTTTGCTTGGATGGAACATTGCCTGGTTATCATTTGCATCCGGGGTACGGATCAGGAGCAAACAGCTGGATCGTTAATTTAGAGGGAGGTGGGTGGTGTAATGACGTTAGAACATGTATTTATCGCAAGAAAACACGGCGTGGGTCATCAACATTCATGGAAAAACAGATACCTTTTACGGGAATATTAAGCAATAATGCTGAAGAAAATCCAGATTTTTTCAACTGGAACAGAGTGAAAATTCGTTATTGTGACGGTGCCTCTTTTGCCGGGGATGGTGAAGATAAGGCTGCTCAGCTGCAATTTAGAGGACAACGTATATGGTTGGCTGCAATAGAAGATTTGATGTCAAAGGGAATGCGATTTGCCAAGCAGGCTCTTCTTTCTGGATGCTCAGCCGGTGGTCTAGCTACTATTATACACTGTGATGAATTCCGAGGATTTTTCCCACAGACTACTAAAGTGAAGTGTCTCAGTGATGCTGGGTTATTTCTTGATGCGATTGACGTGTCTAGGGGACATACCATCAGGAATTTTTTCAGTGGTGTTGTGGTGCTGCAGGGAGTGCAAAAGAATCAGCCACGCTTTTGTACTAATCACCTTGATCCCACTTCGTGCTTCTTCCCTCAGAATTTGATTGCCGGTATTAGAACCCCGCTATTCATTCTTAATACTGCCTATGATTCGTGGCAGGTCCAATCAAGCTTAGCCCCTTCATCTGCAGATCCCCATGGCTTTTGGCATGATTGTAGATTAAATCATGCTAAATGTACTACTTCGCAAATCCAATATCTGCAAGGTGGATTCAGGAATCAAATGCTGAATGCTATTAAAGGCTTCTCAAGATCAAATCAGAATGGATTGTTCATAAATTCTTGTTTCGCTCACTGCCAATCTGAGAGGCAGGATACATGGTTTGCCGACAATTCTCCTGTCATTGGGAAAAAGGCAATTGCTCTGGCTGTTGGAGACTGGTATTTCAACCGAGCAGTTGTTAAGGCCATTGATTGTCCTTACCCTTGTGATAATACATGTCATCATCTTGTCTTCAAATGAGCCAAAAATCTAATCAATCTCCAAGATTTGGCTTTTTCCATTAATTTGGACCAATTATTAGATTAGGAAATATGCTATTCAATTAGGAGGAATGCTACTAATACATTTTCTTGACACATTATTTTAACACAATTTATTATTAGGTGAAATTCATGCGAGACTTACTAAATTATGTAGGTCTCATTCCATCTCTTTTGGTGGGATAAGTATGAAATTCACCAAATGAAAGAGTGTGAAGAAGAATGTGTTAAAAAGTCAGCATTTCTCATTAAGTTTATTATCAGACAATAAAAGG 1686 0.4116 MSNLCIVAALVFSFWVDAFSAYQYRHFNETQFSLHEAKEQTHSSLFGRIPLMVGLTLIQGAAAKGAVCLDGTLPGYHLHPGYGSGANSWIVNLEGGGWCNDVRTCIYRKKTRRGSSTFMEKQIPFTGILSNNAEENPDFFNWNRVKIRYCDGASFAGDGEDKAAQLQFRGQRIWLAAIEDLMSKGMRFAKQALLSGCSAGGLATIIHCDEFRGFFPQTTKVKCLSDAGLFLDAIDVSRGHTIRNFFSGVVVLQGVQKNQPRFCTNHLDPTSCFFPQNLIAGIRTPLFILNTAYDSWQVQSSLAPSSADPHGFWHDCRLNHAKCTTSQIQYLQGGFRNQMLNAIKGFSRSNQNGLFINSCFAHCQSERQDTWFADNSPVIGKKAIALAVGDWYFNRAVVKAIDCPYPCDNTCHHLVFK 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01372 417 PANTHER NOTUM-RELATED 51 413 IPR004963 GO:0016787
Pste4g01372 417 Pfam Pectinacetylesterase 51 396 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01372 Pste-Chr4 10159749 10164000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01372 1 417 Carbohydrate Esterase AT1G57590 64.623 0.0 583
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02931 5 22072610 22076404 Pste4g01372 4 10159749 10164000 PCT