Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01362 AACCTTTGTTGGATCATTCACGATCCTACCTGAAGCTTCAATATTGTGTTAGTGTTAGTGAGAGTACGATGAGGATCGCTGCCTTTTCTCGCGCACTTATTTTCTTCCTTTGTTGTCTATTTCTAAAATTCTTATCTCAAGGCAGTGCCCAGCTGAACGGTTATTTCTGTGATTACAACAAGGTGGGGAACTACACAGCAAATGGCACCTATGGAAACAATCTGAATACAGTTTTATCGAATCTGACTTCCAACACACAAATTGACTATGGTTTCTACAACTCCTCGTATGGTGAAAACCCAGACAGAGTGAACGCCATTGGGCTGTGTAGGGGAGATGTTGAGCAAAATGAGTGCCGCAGTTGCCTCCTCGATTCCAGAGGCAACCTCACACAGCGTTGCCCAAACCAGAAAGAGGCAATTATTTGGTTTGACAACTGCATGTTGCGCTACTCAAACCACTCCATATTTGGCCGAATGGAAACTTCACCTTTGCTTCATATGTGGAACATGGCCAATGCAACGGACATGGAGCAGTTCAATGACGCGCTTGGGAGCTTGATGCATAATCTAACTGAGAGAGCTGCATCAGGTAACTCTCGTCGTAAGTATGATACGGGCGATACTATTGCTGCGAATTTTCAAGCCATATATGGTATGGTGCAGTGCACGCCTGATTTGTCTCGGCAAGACTGCAATAACTGCTTGGTTGGAGCTATCTCAGATATCCCAAGTTGTTGTAATGGCAAGAGAGGAGGCAGAGTTATTACACCCAGTTGTAATATTAGATTTGAAAGCTACCTCTTCTACCAACAAACCACTGTAATAGACCCACAGCTGCCACCACCTCCTCCGCTCACCAATAACACTTCCCAAGAAGATAGTGGCAACACAACACTCATTATCATTGCCGTAGTTGTGCCTACTGCGGTTGTTGTTGTTTTGCTCATTTTTAAAGGAGAAGATGAAGACGAGGATGAAATTAAAATTGCTGAGTCATTACAATTCAACTTGGACTTAATTCGAGTTGCTACAGGAGACTTCTCTGAATCCAATAAACTAGGACAAGGAGGATTTGGAGCTGTTTACTGGGGTAAGCTCTCCGATGGACAGATGATTGCTGTCAAAAGGTTGTCAAGAGATTCTGGACAAGGAGATATAGAATTTAAGAATGAAGTGCTTTTAGTGGCCAAACTTCAACACCGAAATTTAGTTAGACTACTTGGTTTCTGCTTAGAAGGAAAAGAAAGGTTACTTGTCTACGAATATGTTCATAATAAAAGCCTTGACTATTTCATATTCGACCCAACCATGAAAACACAATTGGATTGGGAAAGACGTTACAAAATTATTAGAGATATTGCTCGAGGCCTTGTTTACCTTCACGAAGATTCTCGACTACGTATTATTCATCGTGATCTCAAAGTAAGTAACATTCTTTTAGATAACGAGATGAATCCTAAGATAGCAGATTTTGGCATGGCAAGACTGGTTTTAATGGATCAAACTCAAGTGAATACAAATAGAATTGTTGGAACCTATGGCTATATGGCACCAGAGTATGCAATGCATGGGCAATTTTCAGTAAAGTCGGATGTTTTCAGCTATGGTGTGCTGGTTCTTGAGATTGTAAGTGGCCAGAAAAACAATGGCATTCATAATGGAGAGAATATGGAAGATCTAATAAGCTTTGCATGGAGAAACTGGAAGGAGGGGACAGCCATAAATATTGTAGATCCATCTTTAAGCAACAATTCACGAAATGAAATTATGAGATGCATCCATATTGGTTTACTCTGTGTTCAAGAAAATTTAGTCGACAGACCAACCATGGCTAACATTATGTTGATGCTCAATAGTTATTCTCTTAGTCTTCCAATTCCAACAGAACCTGCATTTTATATGAATAGTAGAACTAGAAGCCTTCCAAACATGCAGTCATGGGAGTATGATTCAAGGGAAACAGGATCAAGTCCAAGTGAACCAATAATTAAATCAGTTCAAGAATCAGAAAATGAGGCTTCAATTACTGAGCTATTCCCGCGC 2045 0.4073 MRIAAFSRALIFFLCCLFLKFLSQGSAQLNGYFCDYNKVGNYTANGTYGNNLNTVLSNLTSNTQIDYGFYNSSYGENPDRVNAIGLCRGDVEQNECRSCLLDSRGNLTQRCPNQKEAIIWFDNCMLRYSNHSIFGRMETSPLLHMWNMANATDMEQFNDALGSLMHNLTERAASGNSRRKYDTGDTIAANFQAIYGMVQCTPDLSRQDCNNCLVGAISDIPSCCNGKRGGRVITPSCNIRFESYLFYQQTTVIDPQLPPPPPLTNNTSQEDSGNTTLIIIAVVVPTAVVVVLLIFKGEDEDEDEIKIAESLQFNLDLIRVATGDFSESNKLGQGGFGAVYWGKLSDGQMIAVKRLSRDSGQGDIEFKNEVLLVAKLQHRNLVRLLGFCLEGKERLLVYEYVHNKSLDYFIFDPTMKTQLDWERRYKIIRDIARGLVYLHEDSRLRIIHRDLKVSNILLDNEMNPKIADFGMARLVLMDQTQVNTNRIVGTYGYMAPEYAMHGQFSVKSDVFSYGVLVLEIVSGQKNNGIHNGENMEDLISFAWRNWKEGTAINIVDPSLSNNSRNEIMRCIHIGLLCVQENLVDRPTMANIMLMLNSYSLSLPIPTEPAFYMNSRTRSLPNMQSWEYDSRETGSSPSEPIIKSVQESENEASITELFPR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01362 659 Gene3D Phosphorylase Kinase; domain 1 293 400 - -
Pste4g01362 659 MobiDBLite consensus disorder prediction 625 652 - -
Pste4g01362 659 FunFam cysteine-rich receptor-like protein kinase 10 401 602 - -
Pste4g01362 659 Gene3D - 138 246 IPR038408 -
Pste4g01362 659 Gene3D - 30 132 IPR038408 -
Pste4g01362 659 Pfam Salt stress response/antifungal 34 130 IPR002902 -
Pste4g01362 659 Pfam Salt stress response/antifungal 150 244 IPR002902 -
Pste4g01362 659 Pfam Protein tyrosine and serine/threonine kinase 328 592 IPR001245 GO:0004672|GO:0006468
Pste4g01362 659 FunFam Cysteine-rich receptor-like protein kinase 10 293 400 - -
Pste4g01362 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Pste4g01362 659 Gene3D Transferase(Phosphotransferase) domain 1 401 602 - -
Pste4g01362 659 ProSiteProfiles Gnk2-homologous domain profile. 30 133 IPR002902 -
Pste4g01362 659 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 39 632 - -
Pste4g01362 659 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 133 - -
Pste4g01362 659 SMART serkin_6 325 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01362 659 CDD STKc_IRAK 331 596 - -
Pste4g01362 659 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Pste4g01362 659 SUPERFAMILY Protein kinase-like (PK-like) 312 630 IPR011009 -
Pste4g01362 659 MobiDBLite consensus disorder prediction 625 659 - -
Pste4g01362 659 FunFam Cysteine-rich receptor-like protein kinase 10 141 246 - -
Pste4g01362 659 ProSiteProfiles Gnk2-homologous domain profile. 139 246 IPR002902 -
Pste4g01362 659 ProSiteProfiles Protein kinase domain profile. 325 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01362 Pste-Chr4 10085746 10088995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01362 10 659 Receptor kinase-like Gene Family AT4G21410 48.629 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste4g01362 PK_Tyr_Ser-Thr 1.5e-46 CL0016