Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01361 TGTTAGTGTAAGCTTGTTTCTTTTCTTTTCATAACCATACCATAGTATGAGTAGTGTACCTTACGTCAGGTTTCTTCTGTTTTTCAACCTTATTTGGATTCCAAAGGTTTCCCAGTTAATATAGTCGAGTATGTTGGAAGCAACATTAGGGGGCTCTGAGCCTTAGTTTGATTTGAGGCTTTTCTGAGTTTTGGTTCGTGGATCGATTGATTCATCATCATGCCTTTGTATGAGTTATATCGGCTGGCCAGAGAGAAGCTTGGGAAAGAGAGTAATAGCACACGTTCACCTGATCATTGTTCCTCGCCTGAGAATGATTTTTTTGAGCTAATTTGGGAGAATGGTCAGATTGCAAGCCAGGGTCAGTCCAGTAGAGTTAGAAGGAGCCCCTCTAGTAGGAGTTTGCCATCTCACTGCTTACCATCTCACAGTCCCAAGGGTAGGGATAAAGACGCAGGATATGGTGCCAGCACAAGGATGGGAAAGTTTGGGGATTTGGACTCTGGATTGAATGAAGTGGATTTTGGTCAAGACGAAGATGTGTTACCTTGGTTGGATTATACAACAATGGATGGTTCCTTGCAACATGAATATGGTTCTGATTTCCTTCCTGCCACAAATAGTTTTACTTTATTGGATAAAAAAAGTAATAGCAATATGGCGCTTAGGGATTCTCTTAAAACTTCTAATGAACAAGGGAATGTTTTCAAGGGTTCTTCAGCTGAACAGGTTGAGACCGCTAGACCTAAAGCTAGCACAGGTCAGTTATACCCCCCATCATTGCATCAGTGTCTAACTTCTTTTGTACCTTCTAGATCCAGAGCATCGGATATAACTGAAAATAACAATACGAGTAACGGAAACCGGGATGCGTCTTATGGCGAAATTACTCATATTCTACCTTCCTCAAGTGATTTTTCTGGCTCAAATGTGCAGAAGCAAGATCCACATATGCCTAGTAATGGTTCCAGTTCCACCATAATGAATTTCTCCCATTTTGCAAGGCCTGCTGCTATGGTAAGAGCAAATCTTCAGAACATTGGCCTGAGGTCTGGTTTATCTTCAGCAAGATCAGACAGTGTGGAAATTAAGGATAAATGTGCTGCTGCAACAAGCAGCAATCCTCCTGAATCAATTCTTGTTGATTCAAGTGGTGAATGTTCTAAAGAACCATCCCCGCAATGCCAGCAGGTTGTGGAGCAATCCAAGGTTGACACAAATTCTTTGCAGCAAAAATCTATTGAACAGAATGCTGTGCCTTCTAAGCAGTTGGAGCCTACTTTTAAAGAGACTGCCACTAAGATTGATCAATCTCCCAATCAAATTCTTGGTGACAGCGGCGCTAAAGGACAGACAGCTGCTGAAAAATGTTTGGAGCCAGCGGTAGTCTCTTCCTCTGTTTGCTCTGGGAATGGTGCTGACAGAGGTTCAGATGAACCAAATCAAAATTTGAAGCGAAAAAGAAAAGATAGCGACGATTCTGAGTGCCATAGTGAAGATGCTGAGGAAGAATCAGCGGGTGTTAAAAAGGGAACTGGTGGGCGGGGATGTACAGGTTCCAAGAGAAGCCGTGCAGCTGAAGTGCATAATCTATCTGAAAGGAGACGAAGAGACAGGATCAATGAGAAGATGCGCGCATTACAAGAACTCATACCAAATTGCAATAAGGTGGATAAAGCTTCAATGTTGGATGAGGCAATTGAGTATCTTAAAACACTTCAGCTCCAAGTTCAAATTATGTCAATGGGAGCTGGTTTGTATATGCCTCCAATGATGTTACCTGCGGGAATGCAGCACATGCATGCATCACATATGGCTCCATTTTCACCTATGGGTGTTGGCATGCCTATGGGATATGGCATGGGTTATGGGATGGGAATGCCTGACATGAATGGTGGATCTTCAAGATTTCCTATGATTCAGGTGCCTCAAATACAAGGAACTCATATCCCTGTTGCACATATGTCTGGACCTACTGCTTTACATGGGATGGCCAGATCGAATCCTCCAGGGTTTGGGCTTCCGGGACAAGGACATCCCATGCCAATGCTGCAAGCTCCCGTGTTTCCCTTTTCAGGAGGACCTATCATGAATTCACCAGCTCTGGGACTACATGCCTGTGGATCATCAGGACTTGTTGAAACCGGGAATTCAGCTACTGCATCTGGCTTAAAGGATCAAATATCAAATGTTGACCCACAAGTCAAGCCAAGTACTGGTGGATGTGACTCAACAAGTCAAGTGCCAACCCAGGGTGAAGCAGCAGCTGTTGGATTTGAGCAATCTGCTGTGGTGCATGGTAGTGGTCATGCCTCCGAGGTTAATGACAATGGAGCTGTTAATCCTGGTCCTGGCAGATAACATTATGTTTGGTTGTGATCGATAAGACCGTGCTTAATGGAAGTTTTAAAAAATGAGTCCAAAATCGCTTGCAGATTATCACAGAATATTTCAGAGTCATTGAGGTTAACCCCATCACAATAACTACAAAATCCTAAGTTTCAGACTCACGACATTGTGCGGATTTTGGTTATCTTGAGGACTGTAACTCGTTTGTACATCCACTTAGCAACCTGTTCAATCTATTGCCGTAGAAATTTTATATATCCTTACAAAGGTGTATTAAAATGTTTCATCAGATCTTTCATAGTGATTCTTTGAATTAATTAAATAATATTTTTTCTTTTCTTTTC 2693 0.4244 MPLYELYRLAREKLGKESNSTRSPDHCSSPENDFFELIWENGQIASQGQSSRVRRSPSSRSLPSHCLPSHSPKGRDKDAGYGASTRMGKFGDLDSGLNEVDFGQDEDVLPWLDYTTMDGSLQHEYGSDFLPATNSFTLLDKKSNSNMALRDSLKTSNEQGNVFKGSSAEQVETARPKASTGQLYPPSLHQCLTSFVPSRSRASDITENNNTSNGNRDASYGEITHILPSSSDFSGSNVQKQDPHMPSNGSSSTIMNFSHFARPAAMVRANLQNIGLRSGLSSARSDSVEIKDKCAAATSSNPPESILVDSSGECSKEPSPQCQQVVEQSKVDTNSLQQKSIEQNAVPSKQLEPTFKETATKIDQSPNQILGDSGAKGQTAAEKCLEPAVVSSSVCSGNGADRGSDEPNQNLKRKRKDSDDSECHSEDAEEESAGVKKGTGGRGCTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMLPAGMQHMHASHMAPFSPMGVGMPMGYGMGYGMGMPDMNGGSSRFPMIQVPQIQGTHIPVAHMSGPTALHGMARSNPPGFGLPGQGHPMPMLQAPVFPFSGGPIMNSPALGLHACGSSGLVETGNSATASGLKDQISNVDPQVKPSTGGCDSTSQVPTQGEAAAVGFEQSAVVHGSGHASEVNDNGAVNPGPGR 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01361 713 CDD bHLH_AtPIF_like 451 513 IPR047265 -
Pste4g01361 713 MobiDBLite consensus disorder prediction 660 713 - -
Pste4g01361 713 MobiDBLite consensus disorder prediction 45 66 - -
Pste4g01361 713 Pfam Helix-loop-helix DNA-binding domain 455 501 IPR011598 GO:0046983
Pste4g01361 713 Gene3D - 446 509 IPR036638 GO:0046983
Pste4g01361 713 MobiDBLite consensus disorder prediction 660 679 - -
Pste4g01361 713 PANTHER TRANSCRIPTION FACTOR PIF3 1 674 IPR044273 GO:0003700|GO:0006355
Pste4g01361 713 MobiDBLite consensus disorder prediction 45 83 - -
Pste4g01361 713 MobiDBLite consensus disorder prediction 406 436 - -
Pste4g01361 713 FunFam Basic helix-loop-helix transcription factor 446 509 - -
Pste4g01361 713 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 451 500 IPR011598 GO:0046983
Pste4g01361 713 MobiDBLite consensus disorder prediction 294 351 - -
Pste4g01361 713 MobiDBLite consensus disorder prediction 393 466 - -
Pste4g01361 713 MobiDBLite consensus disorder prediction 153 177 - -
Pste4g01361 713 SMART finulus 457 506 IPR011598 GO:0046983
Pste4g01361 713 MobiDBLite consensus disorder prediction 199 250 - -
Pste4g01361 713 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 448 511 IPR036638 GO:0046983
Pste4g01361 713 MobiDBLite consensus disorder prediction 153 185 - -
Pste4g01361 713 MobiDBLite consensus disorder prediction 298 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01361 Pste-Chr4 10084732 10088942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01361 1 580 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 38.200 8.93e-74 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste4g01361 HLH 7.8e-14 No_clan