Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01359 ACTGAGGGGTTAAACTCTGAGGGGCAAATCCTACTAGACCTCAAGAATGGGCTTCTTGATGAATCTAATGTTCTGGGAAATTGGAGTGCTACTGATGAAACCCCATGTGGATGGATAGGTGTAAATTGCACTCATGATAATGTGGTTATGTCTCTTAATCTGAGTTCAATGCATCTTTCTGGAACTCTAAATGTTGCTCGCATTTGGGCTGACTGGAAATATCTCAAGGAGATTGGCAAGTGCTTGAATTTGGAATATCTTTATTTAAACAATAATCAGTTTGAGGGGACAATTCCTGCTGAATTGGGCAAGTTGTCCTTCTTGAGAAAGTTGAATATTTGCAACAACAAACTCTCTGGTGTGCTTCCAGATGAGTTTGGGAACTTGTCTTCATTGGATGAGTTAGTGGCCTATAGCAACTTTCTTGTTGGACCCCTGCCTAATTCCATTGGTAATCTCAAGAATCTTTCAATTTTTAGAGCTGGGGCTAATAACATTACTGGTAACTTGCCAAAGGAAATTGGTGGATGTAGGAGCTTATTGCGTCTTGGAGATAGGGATGCTTTCAGGTTGAAAGAACTGGTTTTATGGGGAAACCAGTTGTCAGGAGCTATTCCTAAAGAGATTGGGAATTGTACTAGGCTTGAGAACATTGCTTTATATGGGAATAATCTTGTTGGACCAATACCTAAGGAAATGGGGAACCTCAAATCATTGAGATGGTTGTATCTTTACAGAAACAAGTTGAATGGAACCATTCAAGGGAGAGTTTGGCAAAATAAGTGGTCTAAGTTTGCTTTTCTCTTTGAGAATAAGCTAACTGGTGTTATACCAAATGAGTTTAGTAGCTTGAAGAACCTGACAAAGCTGGATCTTTCAATAAATTATCTCACAGGTCCAATTCCGTTTGGTTTTCAATATTTGCCTAAAATGTCTCAGTTGCAACTTTTTGACAACAACTTAACTGGTATTATTCCTCAGGGACTTGGACTTCGTAGTCATCTTTGGGTGGTTGATTTTTCTGACAACAAGTTGACAGGAAGAATACCACCTCATCTATGCAGAAATTCTCACTTGATGTTGTTGAATTTAGCATCTAATAAGCTTTATGGAAATATACCAACAGGGATATTAAACTGTGGATCATTGGCACAGTTGTTGTTACTTGGAAACAGTCTTACTGGCAGCTTCCCTTCAGAATTGTGTAAGCTGCAGAACTTGACTGCCATTGATTTGAATGAGAACAAATTCAGTGGTCCACTTCCTGCTGACATTGGAAACTGCCACAAATTGCAAAGGTTTCACATTGCAAACAATTACTTCACATCGGAGTTGCCTAAGGAAATAGGAAATCTGTTCCAATTGGTGACCTTTAATGTTTCTTCAAATCTTTTCACTGGAAAAATCCCACCTCAAATTTTTTCATGTCAAAAGCTACAACGGCTTGATCTCAGTCAGAATAACTTTTCTGGTTCTTTGCCAGATGAGCTTGGAACGCTTCAGCACTTGGAGATTCTCAAGCTCTCAGACAATATGCTGTCTGGACATATTCCTGCAGCAGTAGGCAATCTGTCTCATTTGAATTGGTTGTTGATGGATGGCAATTATTTCTTTGGTGAAATACCTTCCCAGTTGGGTTCTCTCAGAAGCTTGCAAATTGCAATGGATGTAAGTCACAATAACCTTTCTGGAAGAATACCAGTTCAGCTTGGCAATCTCAACATGCTTGAATATCTCTATCTCAACAACAACCATTTGGATGGAGAAATTCCTGGATCATTTGAGGAGCTTTCAAGCTTGTTGGGGTGCAATTTCTCATTCAACAACCTTTCTGGACCTATTCCTTCCACTAAAATTTTTCAAAGTATGGATGTAAGTAGCTATATTGGTGGTAACGAAGGCCTCTGTGGTGCACCTCTCGGTGACTGCAGTACCAATCCAGCTTCCAGATCTGATACTAAAGGGAAAGGTTTTGATTCTTCTCGTGCTGAAATAATCATGATCATTGCAGCTTCTGTTGGAGGTGTTTCCCTCATTTTCATTTTAGTTATTTTATATTTTATGAGACGTCCTCAGGAGTCAATTGATTCCTTTGAAGGCACTGAGCCTCCCTCCCCAGATTCAGATATCTATTTCCCTCCAAAGGAAGGCTTCACTTTCCATGATCTAGTTGAAGCAACAAAAAGATTTCATGAAAGCTATGTTATTGGAAAGGGGGCATGTGGAACTGTTTATAAGGCAGTGATGAAATCAGGCCAAACCATTGCAGTTAAGAAGCTAGCATCCAACAGAGAAGGGAACAACATTGAGAACAGTTTCAGGGCTGAAATATCAACTTTGGGAAGGATAAGGCATCGAAATATTGTGAAATTGTTTGGCTATTGCTATCACCAGGGTTCCAACCTCCTGCTTTATGAGTACATGGAAAGAGGTAGCTTAGGTGAACAATTGCATGGTTCTGCATGTAATTTGGAGTGGCCAACTCGGTTCATGATTGCTCTTGGAGCTGCTGAGGGCCTTGCCTACTTGCATCATGACTGCAAACCAAAGATTATTCACCGCGACATAAAATCTAACAACATTCTGCTGGATGAAAATTTTGAGGCCCATGTTGGTGATTTTGGTTTGGCAAAAGTGATTGACATGCCTCAGTCAAAATCAATGTCTGCTGTTGCTGGATCTTATGGCTATATTGCTCCTGAATATGCATATACCATGAAGGTCACAGAGAAGTGTGACATTTATAGCTATGGTGTTGTGCTCTTGGAACTGCTAACTGGAAGAACACCAGTTCAGCCTCTAGAGCAAGGAGGTGATCTTGTCTCATGGGTGAGAAACCATATCCGGGACCACAACAATGCATTGACACCAGAGATACTCGACAGTCGTGTAGATCTGGAAGACCACACCACTGTGAACCACATGCTCACTGTTATGAAGCTTGCTTTAGTGTGCACAAGTGTGTCTCCTACTAAGAGGCCATCAATGAGAGAAGTTGTGTCCATGCTTATTGAGTCAATGAGAAAGAAGGAACTTAACACTCACTCAAACATACCATGATCTTCCTTCCAAAGATGGCATGTGAAGAAAGTATGCAACATCTCTTGACATTTTGTTAACAAATATGAATTTTTCTGTTCATTTTCCTTCCCACAAGGAAAATAGTAGATGATTCTTGTACATTCTTTCACTCCATTATGTCAGTAGACTCAACTGTTTTCCTTATAGCATTCTTTATTATTAATTTCTTGTCTCTGTATTTTCTTTTGGAATTCAGTATATATATAAATAGTAACTTATTGTACAGTTGGGAATTACAATTGAATGTGTATCGTGCAGTTTATATGGTATATATAGGGAAGGATAATAAATATTTGAGTTATTCAATATAATATGTTACAGGTTTCCTGGAACTGATTGGTGAACAATTTAATGAA 3437 0.3928 TEGLNSEGQILLDLKNGLLDESNVLGNWSATDETPCGWIGVNCTHDNVVMSLNLSSMHLSGTLNVARIWADWKYLKEIGKCLNLEYLYLNNNQFEGTIPAELGKLSFLRKLNICNNKLSGVLPDEFGNLSSLDELVAYSNFLVGPLPNSIGNLKNLSIFRAGANNITGNLPKEIGGCRSLLRLGDRDAFRLKELVLWGNQLSGAIPKEIGNCTRLENIALYGNNLVGPIPKEMGNLKSLRWLYLYRNKLNGTIQGRVWQNKWSKFAFLFENKLTGVIPNEFSSLKNLTKLDLSINYLTGPIPFGFQYLPKMSQLQLFDNNLTGIIPQGLGLRSHLWVVDFSDNKLTGRIPPHLCRNSHLMLLNLASNKLYGNIPTGILNCGSLAQLLLLGNSLTGSFPSELCKLQNLTAIDLNENKFSGPLPADIGNCHKLQRFHIANNYFTSELPKEIGNLFQLVTFNVSSNLFTGKIPPQIFSCQKLQRLDLSQNNFSGSLPDELGTLQHLEILKLSDNMLSGHIPAAVGNLSHLNWLLMDGNYFFGEIPSQLGSLRSLQIAMDVSHNNLSGRIPVQLGNLNMLEYLYLNNNHLDGEIPGSFEELSSLLGCNFSFNNLSGPIPSTKIFQSMDVSSYIGGNEGLCGAPLGDCSTNPASRSDTKGKGFDSSRAEIIMIIAASVGGVSLIFILVILYFMRRPQESIDSFEGTEPPSPDSDIYFPPKEGFTFHDLVEATKRFHESYVIGKGACGTVYKAVMKSGQTIAVKKLASNREGNNIENSFRAEISTLGRIRHRNIVKLFGYCYHQGSNLLLYEYMERGSLGEQLHGSACNLEWPTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLEQGGDLVSWVRNHIRDHNNALTPEILDSRVDLEDHTTVNHMLTVMKLALVCTSVSPTKRPSMREVVSMLIESMRKKELNTHSNIP 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01359 1019 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 698 807 - -
Pste4g01359 1019 Gene3D Ribonuclease Inhibitor 267 331 IPR032675 -
Pste4g01359 1019 Pfam Leucine rich repeat N-terminal domain 5 43 IPR013210 -
Pste4g01359 1019 SMART serkin_6 730 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01359 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 851 863 IPR008271 GO:0004672|GO:0006468
Pste4g01359 1019 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 186 277 - -
Pste4g01359 1019 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 332 647 - -
Pste4g01359 1019 SUPERFAMILY Protein kinase-like (PK-like) 707 1003 IPR011009 -
Pste4g01359 1019 SUPERFAMILY L domain-like 5 252 - -
Pste4g01359 1019 Gene3D Transferase(Phosphotransferase) domain 1 808 1018 - -
Pste4g01359 1019 ProSiteProfiles Protein kinase domain profile. 730 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01359 1019 SUPERFAMILY RNI-like 194 617 - -
Pste4g01359 1019 Pfam Protein kinase domain 731 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01359 1019 Gene3D Ribonuclease Inhibitor 332 647 IPR032675 -
Pste4g01359 1019 SMART LRR_typ_2 452 476 IPR003591 -
Pste4g01359 1019 SMART LRR_typ_2 500 524 IPR003591 -
Pste4g01359 1019 SMART LRR_typ_2 308 331 IPR003591 -
Pste4g01359 1019 SMART LRR_typ_2 404 428 IPR003591 -
Pste4g01359 1019 SMART LRR_typ_2 105 128 IPR003591 -
Pste4g01359 1019 SMART LRR_typ_2 573 596 IPR003591 -
Pste4g01359 1019 SMART LRR_typ_2 236 260 IPR003591 -
Pste4g01359 1019 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 808 1018 - -
Pste4g01359 1019 Gene3D Ribonuclease Inhibitor 186 266 IPR032675 -
Pste4g01359 1019 Gene3D Phosphorylase Kinase; domain 1 705 807 - -
Pste4g01359 1019 Pfam Leucine Rich Repeat 576 597 IPR001611 GO:0005515
Pste4g01359 1019 Pfam Leucine rich repeat 83 139 IPR001611 GO:0005515
Pste4g01359 1019 Pfam Leucine rich repeat 478 536 IPR001611 GO:0005515
Pste4g01359 1019 Pfam Leucine rich repeat 190 249 IPR001611 GO:0005515
Pste4g01359 1019 Pfam Leucine rich repeat 270 321 IPR001611 GO:0005515
Pste4g01359 1019 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 267 1004 - -
Pste4g01359 1019 FunFam Nuclear pore complex protein NUP107 4 172 - -
Pste4g01359 1019 Gene3D Ribonuclease Inhibitor 4 181 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01359 Pste-Chr4 10078931 10083223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01359 4 1005 Receptor kinase-like Gene Family AT5G56040 37.346 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste4g01359 Pkinase 2.1e-50 CL0016