Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01342 GGCAGAGAGACGAGAGAGAAGCTGAGAGGAAAGAGGGGAGGGTGCATAAAAGTCAAGTCCATTCCCATTTTCCAAACACAAGGGGTAAACACGTAAAATGACAGTTGCAGTTGAAGACAAGACACACAAAGTTGGTTGCTTGTAAAGAGGGCCGAAGCAGAAATAATAGTGAGTTAAGAATCGCATTTGACTTCATCCATAGGATTTGGAATATGGGCGGAGGCGGAGCGGCGACGGCGCAGGCGGAGGCGCAGTACTCATCGGCGAAGACGTCTGTTTGGTGGGACATAGAGAACTGCCACGTGCCGAAAGGCTGCGATCCCCATGCGATCGCCCAGAACATAAGCTCCGCCCTCGTTCGCATGAACTACTGCGGCCCCGTTTCCATCTCCGCCTACGGCGACACCACTCGCATCACTGCCACCGTTCAACACGCCCTCTCCAGCACCGGCATCTCCCTCAATCATGTCCCTGCCGGCGTTAAAGATGCAAGTGACAAAAAGATTCTTGTAGACATGCTGTTCTGGGCAGTGGATAATCCTGCACCTGCTAATTACTTACTAATTTCTGGTGACCGAGACTTCTCTAATGCTCTTCATCAGTTGCGGCTGAGGAGGTATAATATTCTTCTTGCACAACCTCAGAAAGCTTCCGCGCCCTTAGTTGCAGCTGCTAAGAATGTGTGGCTATGGACTAGTCTCTTGGCTGGGGGACCTCCTCTTATGGGTGGTGAATCCCAACAATTTGGTAATAATAACATACAATCATCTTCTGACACCTTAACGGTTCCTGTCTCTAATGCTCTTCAGATACCGCAGCATGTGGATTCCTTTTCTGAAGTTCATACAGGAAATCAGAAATTTCAAAATACAGGAGGAAGGCAGCTTGATACTAGATATCATGGGAAAACTAATGGGAGAAATTCAAGTAAACCAAATGGACCCAAGGCCGTGAATCCAGCTCAAGCTGGACTTCAAGAAAATTATAGCAATATAAATTCTTCTCGACCTGGCAACTATACCTATAATGCTCCCCCAAGTGGATCTACCCCTAATTTTGTTCGTGGCAATCCTGATCAAATGCGGGCAAACAATGGTAATCTACAAGGCAATCATCAAAATCCATATTTACAGCCATTAAGACCAAATTCATTTCCTTTTCAACCTCCTTTTACGCCAACTAATTCATTTTCTCCAAATTCCCAAGCTTTTGCAACTTCAGTAGTGCCACATAGAGCTGGTGGACCCAGCTTCCCTGCAGCACCACTTACAAATGTGCCAGACATAAGCAATCTGAAAATATCTGGATATCCTATTAATCCTCAAGATCCACGCCCTGTTAAACAAAGGAATGGAGACTTGAAAAGGAGTTCTAAGAGTAATGCTCTAAATCCCGTAAAGTCAATAGATGAACAAAATGGACACATGGGACAGAATACACAAGAATTGTATAATGGTCATCCACACGGTCCAGAATACCAACCTACATCATTGGCAACTGGGAGTGGTAATAACCTTCCTGGTAATGGTATATGGGGATCTGCAGGATGCCCTAAACCTTCTGAATACGTCCAAGGTCTTATAGGGGTTGTTTTACTTGCCTTGAACACGCTAAAAACTGAAAAAATTGTGCCAACTGAATCAAATATAACCGATTGCATTCGATTTGGAGATCCCAAGCACCGCAATACAGATGTCAAGAAAGCTCTGGAGAGTGCTATTGAGCAGCAGATGGTGGTGAAGCAGAATGTAGGTCCTTTGCAGTTGTTTGTTGGTAAGAATGATAAGGTTTGGAAGTGTGTAAACCCTATAGGTGGTAATCCTAAGAAGCACACCAAAGAGACATGGAATGAAATTAAAAAATTTCTAACAACTCCTTCCGGAAGATTAGCAATAATGGATACTCAGTGCAAGTATGAAGCTGGTATTTTGATTAAAAATATGTGCTTGAAAAATCATGCTCTGGGCGATGTCCTACAGATTTTGAACATGGTGATTACCAATAAAAAATGGATTGTGCATCAACAGTCGGGCTGGCAACCACTTAACATCACCCTTACTGAGGTCAATTCTGATTCAGAGGTCGTAGCACGCCCATAA 2099 0.4421 MGGGGAATAQAEAQYSSAKTSVWWDIENCHVPKGCDPHAIAQNISSALVRMNYCGPVSISAYGDTTRITATVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRLRRYNILLAQPQKASAPLVAAAKNVWLWTSLLAGGPPLMGGESQQFGNNNIQSSSDTLTVPVSNALQIPQHVDSFSEVHTGNQKFQNTGGRQLDTRYHGKTNGRNSSKPNGPKAVNPAQAGLQENYSNINSSRPGNYTYNAPPSGSTPNFVRGNPDQMRANNGNLQGNHQNPYLQPLRPNSFPFQPPFTPTNSFSPNSQAFATSVVPHRAGGPSFPAAPLTNVPDISNLKISGYPINPQDPRPVKQRNGDLKRSSKSNALNPVKSIDEQNGHMGQNTQELYNGHPHGPEYQPTSLATGSGNNLPGNGIWGSAGCPKPSEYVQGLIGVVLLALNTLKTEKIVPTESNITDCIRFGDPKHRNTDVKKALESAIEQQMVVKQNVGPLQLFVGKNDKVWKCVNPIGGNPKKHTKETWNEIKKFLTTPSGRLAIMDTQCKYEAGILIKNMCLKNHALGDVLQILNMVITNKKWIVHQQSGWQPLNITLTEVNSDSEVVARP 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01342 628 MobiDBLite consensus disorder prediction 207 316 - -
Pste4g01342 628 MobiDBLite consensus disorder prediction 252 310 - -
Pste4g01342 628 MobiDBLite consensus disorder prediction 207 245 - -
Pste4g01342 628 PANTHER LIMKAIN B LKAP 14 509 IPR024768 GO:0005777|GO:0010468
Pste4g01342 628 Gene3D - 11 162 - -
Pste4g01342 628 MobiDBLite consensus disorder prediction 363 433 - -
Pste4g01342 628 CDD PIN_limkain_b1_N_like 19 143 - -
Pste4g01342 628 MobiDBLite consensus disorder prediction 385 414 - -
Pste4g01342 628 Pfam NYN domain 19 156 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01342 Pste-Chr4 9888916 9891837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01342 11 181 C2H2 Transcription Factor Family AT5G61190 75.439 8.06e-83 279