Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01333 ATGGCTTCGTTTTCATTGAGGCTACTTTCCTTTGAGACTACACAACTAACAGCACCTATCACACAAACCTCAACACCCTTTTGTCCACTCTCAACCAATACAGAAATTGACTACGGTTTCTACAATTTCTCAAACGGGAAAAGCACTGACAAAGTGAACGCCATTGGGCTGTGTAGAGGAGATGTTAAGCCAGAAGAATGCCGCAACTGTCTTGAACAGTCGAGAGCCAATCTCACTGAGCTCTGTCCAAATCAGAAGGAAGCAATTGGGTGGTACGAGGACGAGAAATGCATGTTGCGCTACTCAGACCGTTCAATAATGGAAACTGCACCTGCTTATTATGCTGACAATATGAACAATGCAACGGACTTGGATCAGTTCCATAAAGATGTCAACACCTTGCTGGGCAACTTAACCAGCCAAGCTGCATCAGGTGACTCTCATTTTAAGTATGCTGCAGGAGCCATACCTGGTTCTAATAAGGTCATATATGGTCTTGTTCAGTGCACACCAGACTTGATAGGGTCTGAGTGCTCTAATTGCTTGGCTCAGTCGATTGAACGTATCCAAATAGATTATTGTAAAGACAATATAGGTTGTAGGGTTGTTAGACCCAGTTGTAATATGAGGTTCGAAACCTCCTTTAAGTTCTATGAAGATCCAGCATATGTACCGCCAACTGCTCCTTCCACAAAAGGTGAAAGCAAAAGCAACTCAACTACGATTGCCATAGCAATAGCAGTACCAGTTGTTGTAGTTGTTGCTGTGGTGCTCATATTTATCTTGGTCCGTTCAAGAGCTAGGAAGCCAGGGGAAAAGAATGAAACTCAACAAGAAGCGCATGATGATGATGATGAAATTGACATTTCTGACTCATTGCAATTCAGCTTTAATACCATACGAGATGCGACAAATGACTTTTCCGATTCTAATAAACTCGGACAAGGCGGATTTGGGGCTGTTTATAGGGGTATGCTCTCCGATGGACAAAACATTGCTGTCAAAAGGTTGTCAGCCAATTCTAGACAAGGAGATATAGAATTCAAGAACGAAGTACTTTTAGTGGCTAAGCTTCAGCACAGAAATTTAGTTAGGTTACTTGGTTTCCGTCTTGAAGGAAGAGAGAGATTGCTTGTCTATGAATTTGTTTCAAATAAAAGTCTTGATTACTTTATATTTGATGAAATCAAAAGAGGACAATTAGACTGGGAAATGCGCAACAAAATCATTGCAGCAATTAATATTCTCGATGAAGAAATGAATCCTAAAATATCAGATTTTAGTTTAGAAAGATTGTTTGTTGTGGACCAAACTCATGCAGACACAGATAAAGTTGTTGGAATCCACGGTCAAAAAAATAGTGGCATTCGTCGTGGAGAGAATATAGATGATCTCTCGAATTTTGCATGGCGAAGCTGGAGGGAAGGAAGAGCTATAGATATAATAGATCCCAAATTAAACTATAGTTCACAAAATGAAATAATGAGATGCATCCACATTGGATTACTTTGCGTTCAAGACAATGTAGCTGCCAGACCAACTATGGCTTCTGTTGTTCTAGTGCTTAATAGTCATTCTCTCACTCTCCCTTTACCATCAGAGCCTGCATTTTATGTTGATAGTAGAACCGGAAACCTTCCAAACATGCAGTTATGGGAGTTTACATCAAGGTCAACAACAAGATCAAACAACATAAGATCAACTCATGAATCGATCAATGAGGCTTCAATTACTGAGCCATATCCTCGCTAG 1752 0.403 MASFSLRLLSFETTQLTAPITQTSTPFCPLSTNTEIDYGFYNFSNGKSTDKVNAIGLCRGDVKPEECRNCLEQSRANLTELCPNQKEAIGWYEDEKCMLRYSDRSIMETAPAYYADNMNNATDLDQFHKDVNTLLGNLTSQAASGDSHFKYAAGAIPGSNKVIYGLVQCTPDLIGSECSNCLAQSIERIQIDYCKDNIGCRVVRPSCNMRFETSFKFYEDPAYVPPTAPSTKGESKSNSTTIAIAIAVPVVVVVAVVLIFILVRSRARKPGEKNETQQEAHDDDDEIDISDSLQFSFNTIRDATNDFSDSNKLGQGGFGAVYRGMLSDGQNIAVKRLSANSRQGDIEFKNEVLLVAKLQHRNLVRLLGFRLEGRERLLVYEFVSNKSLDYFIFDEIKRGQLDWEMRNKIIAAINILDEEMNPKISDFSLERLFVVDQTHADTDKVVGIHGQKNSGIRRGENIDDLSNFAWRSWREGRAIDIIDPKLNYSSQNEIMRCIHIGLLCVQDNVAARPTMASVVLVLNSHSLTLPLPSEPAFYVDSRTGNLPNMQLWEFTSRSTTRSNNIRSTHESINEASITEPYPR 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01333 583 ProSiteProfiles Gnk2-homologous domain profile. 109 216 IPR002902 -
Pste4g01333 583 ProSiteProfiles Gnk2-homologous domain profile. 1 106 IPR002902 -
Pste4g01333 583 FunFam Cysteine-rich receptor-like protein kinase 10 269 382 - -
Pste4g01333 583 ProSiteProfiles Protein kinase domain profile. 307 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01333 583 MobiDBLite consensus disorder prediction 562 583 - -
Pste4g01333 583 Gene3D Phosphorylase Kinase; domain 1 268 382 - -
Pste4g01333 583 Gene3D - 109 215 IPR038408 -
Pste4g01333 583 Gene3D - 22 105 IPR038408 -
Pste4g01333 583 Pfam Protein kinase domain 308 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01333 583 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Pste4g01333 583 FunFam Cysteine-rich receptor-like protein kinase 10 111 215 - -
Pste4g01333 583 Gene3D Transferase(Phosphotransferase) domain 1 449 528 - -
Pste4g01333 583 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 448 581 - -
Pste4g01333 583 Pfam Salt stress response/antifungal 119 213 IPR002902 -
Pste4g01333 583 Pfam Salt stress response/antifungal 35 103 IPR002902 -
Pste4g01333 583 SUPERFAMILY Protein kinase-like (PK-like) 295 558 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01333 Pste-Chr4 9832042 9835186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01333 38 541 Receptor kinase-like Gene Family AT4G21410 42.881 7.49e-140 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste4g01333 Pkinase 7.2e-13 CL0016