Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01332 TTGAAAGGAGAGGAGTGTAAGTAAAATAAACAACTAACCCTGAAGTGAAATGGAGATGGGTGAAATCGATTTTGATATTAGCTAGCAATAATAATAGAAATGTTCATAATAGATTGAGGAATATCCATTCCAAGAGGACTGCCACTGACTTTACAGATACACCACAAATCACAATTGCATTGCATTGCATGTTTCTCTTCTCTTTTACTGCACTAATTTGGAATTGGATGTTGTAACACATCTATTACCTCTCACTCATAACTTCACCTTTCTTCTTATCATCCCCACCCACAACCCTCCACTGCCATTCTCGACCCAACTTAGATTTACTCTTACATTACCCAAATCCACTTAGGATTTTCAATTTTCATCTATTTTTAAGAACTGGGTTCTCAGTGTTCCTTGTTTTTTGGGTTGCCTTTAGTCAAAGATCTGGCCTTTTTGGTTTGGTGTCCCTTGTTTTAGATGTGGCGATCTGGGATTTCTGGTGTGTTGTCGTTGTGAATCTAGCTCACCATAGATAGGCCTCGGGTTGTGAGAGATGGGTGATGATCTTAAAGCTGAACTGTCGGAGAAAACTGGTGCTTTTGGTCTTAAGGTTTGGCAAGTAATTGGAATTGCAGTTGGATTGTTTATTATTGTCATCCTTTGTGTGCTTTCATTTTGCCTTACTTTGAGGAAGAAATCTAGAAAAGCCAGACGCAGGGTTCCTGCTAGTCATATACCTAGTGTATCAAAGGAAATCACTGAAGTGCGGGTTGAGCAAGTGCCAGCAAATGGATTTGTTCCTCGTGAAGGAATACTTCTTACTATTCATGATAAATCCAGTGACAAAGAGTCAGACAAAGTTATGCTTCATTTAGGTGTTGGGAAGAAGAAGCATGGGGATAGTGGCAGTCACTCGGATTCCTTTCATTACTTAGAGAAAGATGGAGGTGGGTCACAATCAGGGGAAGAAATTAGCTCTGGGACGGTTGGAATGTACATGCCCTCTTCTTCATACCCTATAACGGCTCCTTCACCTCTCTCTGGCCTTCCAGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACTCTGAGGGATCTTGAACTCGCTACAAACCGTTTTTCAAAAGAAAATGTAATCGGTGAGGGTGGGTATGGAGTTGTTTACCGGGGACAGTTGATCAATGGGACTCCTGTGGCAGTTAAAAAGATACTCAATAACATCAGTGGTCAAGCTGAGAAAGAGTTTAGAGTGGAAGTTGAAGCTATTGGCCATGTCCGACATAAGAATTTGGTTCGACTTTTGGGTTACTGCATTGAGGGGACTCACAGGATGTTAGTCTATGAATATGTCAATAATGGAAACTTAGAGCAATGGCTTCATGGAGCTATGCGACATCATGGATATCTTACCTGGGAAGCACGTATCAAAATTCTCCTTGGCACGGCTAAGGGACTTGCATATTTGCATGAAGCGATTGAGCCAAAGGTGGTACACCGAGATATCAAGTCAAGCAACATATTAATTGATGATGACTTTAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGTTACTCGGTTCTGGAAAGAGTCATGTTGCAACGAGAGTTATGGGAACCTTTGGATACGTGGCTCCTGAATATGCAAATACTGGTCTGCTAAATGAAAAAAGTGATGTTTATAGCTTTGGTGTTGTGCTATTGGAGGCAATTACTGGAAGAGATCCGGTTGATTATGGTCGTCCAGCACAGGAAGTTAATATGGTTGATTGGCTGAAGATGATGGTTGGAAACAGGCGATCAGAAGAAGTGGTGGATCCAAACATTGAGGTGAAGCCATCTACCAGAGCTTTGAAACGGGCGCTCTTAACTGCTTTGAGATGTGTAGATCCAGATTCAGAGAAAAGACCCAAGATGGGCCAAGTTGTGCGTATGCTTGAGTCAGAGGAGTACCCTTTAGCTAGAGAGGACCGAAGGCATAAAAAAAATCGTGGGGATAACTCAGAAATTGAATCTCATAAGGATAATTCTGACACGGATTGCAGTGACATTCAGGGTTCTAGATCAGGAAGTGGAAGGATGGGCATGGCAGAGAGGCTCACAAGGGGAAAATGTTATCTTTTGTGGTTTCCTTTCGTTTCTTTTGTTGTAGAAGGATAG 2146 0.4203 MGDDLKAELSEKTGAFGLKVWQVIGIAVGLFIIVILCVLSFCLTLRKKSRKARRRVPASHIPSVSKEITEVRVEQVPANGFVPREGILLTIHDKSSDKESDKVMLHLGVGKKKHGDSGSHSDSFHYLEKDGGGSQSGEEISSGTVGMYMPSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVIGEGGYGVVYRGQLINGTPVAVKKILNNISGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKGLAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGSGKSHVATRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPAQEVNMVDWLKMMVGNRRSEEVVDPNIEVKPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESEEYPLAREDRRHKKNRGDNSEIESHKDNSDTDCSDIQGSRSGSGRMGMAERLTRGKCYLLWFPFVSFVVEG 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01332 534 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672|GO:0006468
Pste4g01332 534 Pfam Protein kinase domain 190 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01332 534 Gene3D Phosphorylase Kinase; domain 1 171 265 - -
Pste4g01332 534 MobiDBLite consensus disorder prediction 111 127 - -
Pste4g01332 534 SMART serkin_6 189 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01332 534 FunFam Putative receptor-like protein kinase 171 265 - -
Pste4g01332 534 ProSiteProfiles Protein kinase domain profile. 189 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01332 534 CDD STKc_IRAK 195 462 - -
Pste4g01332 534 FunFam Putative receptor-like serine/threonine-protein kinase 266 477 - -
Pste4g01332 534 Gene3D Transferase(Phosphotransferase) domain 1 266 479 - -
Pste4g01332 534 MobiDBLite consensus disorder prediction 468 509 - -
Pste4g01332 534 MobiDBLite consensus disorder prediction 468 496 - -
Pste4g01332 534 SUPERFAMILY Protein kinase-like (PK-like) 173 468 IPR011009 -
Pste4g01332 534 PANTHER OS01G0323000 PROTEIN 5 489 - -
Pste4g01332 534 ProSitePatterns Protein kinases ATP-binding region signature. 195 218 IPR017441 GO:0005524
Pste4g01332 534 MobiDBLite consensus disorder prediction 111 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01332 Pste-Chr4 9828154 9833151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01332 166 517 Trihelix Transcription Factor Family AT1G70460 46.154 6.05e-92 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pste4g01332 Pkinase 7.8e-49 CL0016