Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01317 TTTTGTTTGGTGGTTGAGCTGAGAGGGCGAGTGTCTGAGACCGGAGCCACGCATCCCCGAAAAGCCACCAACCACTACTTGTCACTTCAATTCAATTTCGATTTATACGCATGTGAGAAGCAGAAACTGAAACTGAAACTGAAACTGAAGCTGAAGCATCGAAAAAAATGGCTGTTAACAGTGGGACCCATTCAGATTCAAAACAAGCCATCGTTGTGATTAAGGATCTCATATTCACTTACCCCGGCATCGACGGCCATCCCCCGCCGGCCTCCGCTCCCCTCATTCAAGATTTCTCTCTCACTCTATTTTCCGGCCACCGCTGTCTTCTCGTCGGTTCCAACGGCGCCGGCAAAACCACCATCCTTAAGATCTTGGGAGGGAAGCACTTGGTGGAACCTCACATGGTTCGTGTCCTCGGAAGATCAGCTTTTCACGACACCACTTTAGTATCTTCTGGTGATCTCTGTTATCTCGGTGGCGAGTGGAGGCGAGATGTTGCTTTTGCTGGTTTTGAGGTTCCAATACAAATGGACGTTTCGGCTGAAAAGATGATATTTGGTGTGGCTGGGATTGATCCTCAGAGAAGAGCCGAGCTAATCAAGGTATTAGATATCGATCTTTCCTGGAGATTGCATAAAGTATCTGATGGTCAAAGAAGAAGAGTGCAAATTTGTATGGGTCTACTCAAACCATTCAAGGTTCTTCTCCTTGATGAGATAACAGTTGACCTTGATGTTCTAGCAAGAGCTGACCTTCTAAGATTTCTAAGAAAGGAATGTGAAGAGAGGGGTGCCACTATTATTTATGCAACACATATATTTGATGGTCTTGAGGATTGGCCAACAAATATTGTTTATATAGCCCATGGAAAGCTGCAACTGTCAATGCCTATGGACAAAGTCAAAGAAATTAGCAAATTGTCACTAATGAGAACAGTAGAAAGTTGGCTGCGGAAAGAACGAGATGAAGATAGAAATAAAAGGGAAGAGAGAAAAGCAGCTGGCCTTCCTGAATTTGAAAAGCAAGTTGACGGAAGCCGTGTAACTGGGGATCCAGCGCGCGCTGCAGTTCGAGTAATTAATAATGGCTGGGCAGCAGGACGATTAAATTCCACAGTTGCTGGAGAGGAAAACTTTCTCCTTAGCTCTAACCGAGTGTTGAGGCAATAGATATGTTAATGCTATGAGCATATTTGCTGTGTATTCTTATGAACTTAAAAACAATTTATTCGCCAATTCTTTTTCCGTTATATAGAGATAACAACAGGTTATACACAAAATGTGACGTAAATGTATCTACCCTTGTAAGCGTTATGTCACATATAGCCTTAGTATTACAAATTTGTAATCAATATATATCATTATATGAGAATAACTAAAAGCTATTGCGTTTGTAAAATTC 1404 0.4224 MAVNSGTHSDSKQAIVVIKDLIFTYPGIDGHPPPASAPLIQDFSLTLFSGHRCLLVGSNGAGKTTILKILGGKHLVEPHMVRVLGRSAFHDTTLVSSGDLCYLGGEWRRDVAFAGFEVPIQMDVSAEKMIFGVAGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLEDWPTNIVYIAHGKLQLSMPMDKVKEISKLSLMRTVESWLRKERDEDRNKREERKAAGLPEFEKQVDGSRVTGDPARAAVRVINNGWAAGRLNSTVAGEENFLLSSNRVLRQ 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01317 334 Pfam ABC transporter 41 186 IPR003439 GO:0005524
Pste4g01317 334 MobiDBLite consensus disorder prediction 266 292 - -
Pste4g01317 334 SMART AAA_5 49 236 IPR003593 GO:0016887
Pste4g01317 334 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 14 262 - -
Pste4g01317 334 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 16 259 IPR003439 GO:0005524
Pste4g01317 334 MobiDBLite consensus disorder prediction 266 283 - -
Pste4g01317 334 Gene3D - 3 289 IPR027417 -
Pste4g01317 334 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 251 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01317 Pste-Chr4 9715120 9720143 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01317 16 213 Calmodulin-binding Proteins AT2G36910 22.791 5.13e-07 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01317 4 9715120 9720143 Pste4g01317 4 9715120 9720143 ECH