Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01310 TTTGTGCACAAAGCAACACGTGTTCCTGCATATTCCCGCCAAGCCAACTGCACTTATACAAGACATTCTTTGGGCCGTTTTATGATTTTGCAATCACCACTGAGAGCCAGTCCTTCCGCTGCCACTGCCGCGGCGGCTGCCTTCTTCAAACCTGGCACTGCTGTTGAAGTCAGTTCCGAAGACGATGGCTTCCGTGGATCTTGGTTTTCCGGTACCATCATCCGCTGCCTTGCCTCTGAGAGGTTCTTGGTCGAGTACGACAACTTAATGGCAGACGAAAAATCCTCCAAACGCCTGAGAGAAATTCTTGCTCTCCGTCACCTGCGCCCAATTCTGCCGCCGGAGACTGGTCGCGTATTTAAATTCGGAGATGAGGTTGATGCGTACCATCACGATGGTTGGTGGGAGGGTCACATTACACAAGAACTAGCAAACGACACGTTTGCAGTTTATTTCAGAGCTTCCAAGGAGCAATTGGTCTTTCCCAAAGAACAACTCAGGCTCCACCGAGAGTGGTTCAATCACAACTGGGTCCCACCACTCCCACAATCGCCACCACAACAGGATAATCGAGAATCGGAGGAAGTGTTGTTGACTGTTGAAACTGTCAAGGAAGAGGAATTTAGTGTAGGGAGGATAGTTGAGGTTAGCAGTGATGAAGATGGGTTCAGTGGAGCTTGGTTTGCTGCTACCGTTGTTGAGGCAGTAAGTAAGGACAAGTTCGTCATTGAGTACCAGACTCTGTTGGCTGATGATGATTCTCAGCTTTTGAGAGAGGAGGTTGATGTCCTGCACTTAAGGCCTCTTCCACCGGATGTGACTGTTGATGGTCAATTCAGTCTTCTTGACGAAGTTGATGCTCTATACAATGATGGTTGGTGGGTCGGTGTGATTTCTAAACTTCTTGATGATTCAAGGTATATAGTTTACTTCAGGTCTTCTAATGAGGAACTAGAGTTTCAGCACTCCCAATTGAGGCTGCACCAGGACTGGATTGATGGCAAATGGTTCATGGCTTCCAAGGCTTTGAAGTTGTGATCGCTGAAGATTTGCTGATGTCCATTTTAGATTATGAGTTCCTAGTCCGTTTGAATCAAAACTTGAACTAATGTCACCGGATATGTTAATGGCAATTTTAGATTATGGGTTATTTAGACGTTGACCTTGACATTTCTTGGATTTGTATAGCCAGTAATACTATTACTCTCGGAAGTAATTTGTGCATTACGGGGCCGATTTGTTAAATGTTATTTATTTCCCTTAAAAATATTATTAGATAAGTTATGAAAAGCAAAATGTATTTTGTTAAAAATGTTATTGATTTATC 1327 0.4416 FVHKATRVPAYSRQANCTYTRHSLGRFMILQSPLRASPSAATAAAAAFFKPGTAVEVSSEDDGFRGSWFSGTIIRCLASERFLVEYDNLMADEKSSKRLREILALRHLRPILPPETGRVFKFGDEVDAYHHDGWWEGHITQELANDTFAVYFRASKEQLVFPKEQLRLHREWFNHNWVPPLPQSPPQQDNRESEEVLLTVETVKEEEFSVGRIVEVSSDEDGFSGAWFAATVVEAVSKDKFVIEYQTLLADDDSQLLREEVDVLHLRPLPPDVTVDGQFSLLDEVDALYNDGWWVGVISKLLDDSRYIVYFRSSNEELEFQHSQLRLHQDWIDGKWFMASKALKL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01310 345 CDD Tudor_Agenet_AtDUF_rpt1_3 208 271 - -
Pste4g01310 345 CDD Tudor_Agenet_AtDUF_rpt1_3 49 113 - -
Pste4g01310 345 Gene3D - 196 279 - -
Pste4g01310 345 SMART agenet_At_2 47 116 IPR014002 -
Pste4g01310 345 SMART agenet_At_2 206 274 IPR014002 -
Pste4g01310 345 SMART agenet_At_2 118 174 IPR014002 -
Pste4g01310 345 SMART agenet_At_2 277 333 IPR014002 -
Pste4g01310 345 CDD Tudor_Agenet_AtDUF_rpt2_4 281 327 - -
Pste4g01310 345 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 39 188 - -
Pste4g01310 345 CDD Tudor_Agenet_AtDUF_rpt2_4 123 168 - -
Pste4g01310 345 Pfam Agenet domain 212 271 IPR008395 -
Pste4g01310 345 Pfam Agenet domain 123 183 IPR008395 -
Pste4g01310 345 Pfam Agenet domain 52 113 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01310 Pste-Chr4 9639779 9649639 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01310 218 331 PHD Transcription Factor Family AT5G58610 31.618 3.08e-10 59.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01310 4 9639779 9649639 Pste4g01310 4 9639779 9649639 ECH