Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01288 ATGGAGTTACTTCTTCGAGAAATCAATCTTTCTTTTGTTTTCTTTATTATATTTTTTTTCCAAGGTAGTAGAGCAAACGATTGTGGTGGAACATATGTTTCACGTACCATTGCAGTTGATCAATCTGGCAAATCCGATTTTCATACTATTCAAGCTGCCATTGATTTTGTACCCACAAACAACAATCGTTGGGTGAAAATTTACATAAAAGCGGGCACATACAAAGAAAAAGTTCAAATTCCATCCAAAAAGTCATGCATCTTCTTCAAAGGCCAAGGCAAAGAAGAAACCACTATTACGTTCAATGACCATACAAAAAATATTAGTGCCACATTTTCTTCGTTTTCAAATAATATTATTGCTTCGGACATTACTTTTATG 381 0.336 MELLLREINLSFVFFIIFFFQGSRANDCGGTYVSRTIAVDQSGKSDFHTIQAAIDFVPTNNNRWVKIYIKAGTYKEKVQIPSKKSCIFFKGQGKEETTITFNDHTKNISATFSSFSNNIIASDITFM 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01288 127 Gene3D - 30 127 IPR012334 -
Pste4g01288 127 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 31 126 - -
Pste4g01288 127 SUPERFAMILY Pectin lyase-like 31 126 IPR011050 -
Pste4g01288 127 Pfam Pectinesterase 37 126 IPR000070 GO:0030599|GO:0042545
Pste4g01288 127 ProSitePatterns Pectinesterase signature 1. 61 80 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01288 Pste-Chr4 9459363 9459858 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01288 14 126 Carbohydrate Esterase AT2G19150 39.474 4.88e-22 86.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01288 4 9459363 9459858 Pste4g01288 4 9459363 9459858 ECH