Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01283 TTAAACTCTGAGGGGCAAATCCTACTAGACCTCAAGAATGGGCTTCTTGATGAATCTAATGTTCTGGGAAATTGGAGTGCTACTGATGAAACCCCATGTGGATGGATAGGTGTAAATTGCACTCATGATAATGTGGTTATGTCTCTTAATCTGAGTTCAATGCATCTTTCTGGAACTCTAAATGTTGCTCGCATTTGGGGTCTGACCCATCTAACATATCTCAACCTTTCTTTCAATAAGCTGACTGGAAATATCTCCAAGGAGATTGGCAAGTGCTTGAATTTGGAATATCTTTATTTAAACAATAATCAGTTTGAGGGGACAATTCCTGCTGAATTGGGCAAGTTGTCCTTCTTGAGAAAGTTGAATATTTGCAACAACAAACTCTCTGGTGTGCTTCCAGATGAGTTTGGGAACTTGTCTTCATTGGATGAAGCTGGGGCTAATAACATTACTGGTAACTTGCCAAAGGAAATTGGTGGATGTAGGAGCTTATTGCGTCTTGGTCTTGCTCAAAATCAGATAGCAGGAGAGATACCAAGGGAGATAGGGATGCTTTCCAGGTTGAAAGAACTGGTTTTATGGGGAAACCAGTTGTCAGGAGCTATTCCTAAAGAGATTGGGAATTGTACTAGGCTTGAGAACATTGCTTTATATGGGAATAATCTTGTTGGACCAATACCTAAGGAAATGGGGAACCTCAAATCATTGAGATGGTTGTATCTTTACAGAAACAAGTTGAATGGAACCATTCCAAGGGAGGTTGGAAATCTTTCTTCATGTTTAGACATTGATTTCTCAGAGAATTCTTTAGTAGGTGATATCCCTTCAGAGTTTGGCAAAATAAGTGGTCTAAGTTTGCTTTTTCTCTTTGAGAATAAGCTAACTGGTGTTATACCAAATGAGTTTAGTAGCTTGAAGAACCTGACAAAGCTGGATCTTTCAATAAATTATCTCACAGGTCCAATTCCGTTTGGTTTTCAATATTTGCCTAAAATGTCTCAGTTGCAACTTTTTGACAACAACTTAACTGGTATTATTCCTCAGGGACTTGGACTTCGTAGTCATCTTTGGGTGGTTGATTTTTCTGACAACAAGTTGACAGGAAGAATACCACCTCATCTATGCAGAAATTCTCACTTGATGGATATTAAACTGTGGATCATTGGCACAGTTGTTTCTTACTGGCAGCTTCCTTCAGAATTGTGTAAGCTGCAGAACTTGACTGCCATTGATTTGAATGAGAACAAATTCAGTGGTCCACTTCCTGCTGACATTGGAAACTGCCACAAATTGCAAAGGTTTCACATTGCAAACAATTACTTCACATCGGAGTTGCCTAAGGAAATAGGAAATCTGTTCCAATTGGTGACCTTTAATGTTTCTTCAAATCTTTTCACTGGAAAAATCCCACCTCAAATTTTTCATCTACAACGGCTTGATCTCAGTCAGAATAACTTTTCTGGTTCTTTGCCAGATGAGCTTGGAACGCTTCAGCACTTGGAGATTCTCAAGCTCTCAGACAATATGCTGTCTGGACATATTCCTGCAGCAGTAGGCAATCTGTCTCATTTGAATTGGTTGTTGATGGATGGCAATTATTTCTTTGGTGAAATACCTTCCCAGTTGGGTTCTCTCAGAAGCTTGCAAATTGCAATGGATGTAAGTCACAATAACCTTTCTGGAAGAATACCAGTTCAGCTTGGCAATCTCAACATGCTTGAATATCTCTATCTCAACAACAACCATTTGGATGGAGAAATTCCTGGATCATTTGAGGAGCTTTCAAGCTTGTTGGGGTGCAATTTCTCATTCAACAACCTTTCTGGACCTATTCCTTCCACTAAAATTTTTCAAAGTATGGATGTAAGTAGCTATATTGGTGGTAACGAAGGCCTCTGTGGTGCACCTCTCGGTGACTGCAGTACCAATCCAGCTTCCAGATCTGATACTAAAGGGAAAGGTTTTGATTCTTCTCGTGCTGAAATAATCATGATCATTGCAGCTTCTGTTGGAGGTGTTTCCCTCATTTTCATTTTAGTTATTTTATATTTTATGAGACGTCCTCAGGAGTCAATTGATTCCTTTGAAGGCACTGAGCCTCCCTCCCCAGATTCAGATATCTATTTCCCTCCAAAGGAAGGCTTCACTTTCCATGATCTAGTTGAAGCAACAAAAAGATTTCATGAAAGCTATGTTATTGGAAAGGGGGCATGTGGAACTGTTTATAAGGCAGTGATGAAATCAGGCCAAACCATTGCAGTTAAGAAGCTAGCATCCAACAGAGAAGGGAACAACATTGAGAACAGTTTCAGGGCTGAAATATCAACTTTGGGAAGGATAAGGCATCGAAATATTGTGAAATTGTTTGGCTATTGCTATCACCAGGGTTCCAACCTCCTGCTTTATGAGTACATGGAAAGAGGTAGCTTAGGTGAACAATTGCATGGTTCTGCATGTAATTTGGAGTGGCCAACTCGGTTCATGATTGCTCTTGGAGCTGCTGAGGGCCTTGCCTACTTGCATCATGACTGCAAACCAAAGATTATTCACCGCGACATAAAATCTAACAACATTCTGCTGGATGAAAATTTTGAGGCCCATGTTGGTGATTTTGGTTTGGCAAAAGTGATTGACATGCCTCAGTCAAAATCAATGTCTGCTGTTGCTGGATCTTATGGCTATATTGCTCCTGAATATGCATATACCATGAAGGTCACAGAGAAGTGTGACATTTATAGCTATGGTGTTGTGCTCTTGGAACTGCTAACTGGAAGAACACCAGTTCAGCCTCTAGAGCAAGGAGGTGATCTTGTCTCATGGAAACCATATCCGGACCACAACAATGCATTGACACCAGAGATACTCGACAGTCGTGTAGATCTGGAAGACCACACCACTGTGAACCACATGCTCACTGTTATGAAGCTTGCTTTAGTGTGCACAAGTGTGTCTCCTACTAAGAGGCCATCAATGAGAGAAGTTGTGTCCATGCTTATTGAGTCCAATGAGAAAGAAGGGAACTTAACACTCACTCAAACATACCATGATCTTCCTTCCAAAGATGGCATTTGGGAATTACAATTGAATGTGTATCGTGCAGTTTAT 3108 0.4048 LNSEGQILLDLKNGLLDESNVLGNWSATDETPCGWIGVNCTHDNVVMSLNLSSMHLSGTLNVARIWGLTHLTYLNLSFNKLTGNISKEIGKCLNLEYLYLNNNQFEGTIPAELGKLSFLRKLNICNNKLSGVLPDEFGNLSSLDEAGANNITGNLPKEIGGCRSLLRLGLAQNQIAGEIPREIGMLSRLKELVLWGNQLSGAIPKEIGNCTRLENIALYGNNLVGPIPKEMGNLKSLRWLYLYRNKLNGTIPREVGNLSSCLDIDFSENSLVGDIPSEFGKISGLSLLFLFENKLTGVIPNEFSSLKNLTKLDLSINYLTGPIPFGFQYLPKMSQLQLFDNNLTGIIPQGLGLRSHLWVVDFSDNKLTGRIPPHLCRNSHLMDIKLWIIGTVVSYWQLPSELCKLQNLTAIDLNENKFSGPLPADIGNCHKLQRFHIANNYFTSELPKEIGNLFQLVTFNVSSNLFTGKIPPQIFHLQRLDLSQNNFSGSLPDELGTLQHLEILKLSDNMLSGHIPAAVGNLSHLNWLLMDGNYFFGEIPSQLGSLRSLQIAMDVSHNNLSGRIPVQLGNLNMLEYLYLNNNHLDGEIPGSFEELSSLLGCNFSFNNLSGPIPSTKIFQSMDVSSYIGGNEGLCGAPLGDCSTNPASRSDTKGKGFDSSRAEIIMIIAASVGGVSLIFILVILYFMRRPQESIDSFEGTEPPSPDSDIYFPPKEGFTFHDLVEATKRFHESYVIGKGACGTVYKAVMKSGQTIAVKKLASNREGNNIENSFRAEISTLGRIRHRNIVKLFGYCYHQGSNLLLYEYMERGSLGEQLHGSACNLEWPTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLEQGGDLVSWKPYPDHNNALTPEILDSRVDLEDHTTVNHMLTVMKLALVCTSVSPTKRPSMREVVSMLIESNEKEGNLTLTQTYHDLPSKDGIWELQLNVYRAVY 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01283 1036 Pfam Leucine Rich Repeat 94 116 IPR001611 GO:0005515
Pste4g01283 1036 Pfam Leucine Rich Repeat 574 595 IPR001611 GO:0005515
Pste4g01283 1036 Pfam Leucine Rich Repeat 119 140 IPR001611 GO:0005515
Pste4g01283 1036 Pfam Leucine rich repeat N-terminal domain 2 40 IPR013210 -
Pste4g01283 1036 Pfam Protein kinase domain 729 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01283 1036 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 331 645 - -
Pste4g01283 1036 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 696 805 - -
Pste4g01283 1036 SMART serkin_6 728 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01283 1036 Gene3D Transferase(Phosphotransferase) domain 1 806 1018 - -
Pste4g01283 1036 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 1 146 - -
Pste4g01283 1036 SUPERFAMILY L domain-like 396 639 - -
Pste4g01283 1036 Gene3D Ribonuclease Inhibitor 395 645 IPR032675 -
Pste4g01283 1036 Gene3D Ribonuclease Inhibitor 147 293 IPR032675 -
Pste4g01283 1036 SMART LRR_typ_2 571 594 IPR003591 -
Pste4g01283 1036 SMART LRR_typ_2 498 522 IPR003591 -
Pste4g01283 1036 SMART LRR_typ_2 330 353 IPR003591 -
Pste4g01283 1036 SMART LRR_typ_2 234 258 IPR003591 -
Pste4g01283 1036 SMART LRR_typ_2 68 92 IPR003591 -
Pste4g01283 1036 SMART LRR_typ_2 186 210 IPR003591 -
Pste4g01283 1036 SMART LRR_typ_2 405 429 IPR003591 -
Pste4g01283 1036 SMART LRR_typ_2 116 139 IPR003591 -
Pste4g01283 1036 SMART LRR_typ_2 453 477 IPR003591 -
Pste4g01283 1036 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 806 1016 - -
Pste4g01283 1036 ProSitePatterns Serine/Threonine protein kinases active-site signature. 849 861 IPR008271 GO:0004672|GO:0006468
Pste4g01283 1036 ProSiteProfiles Protein kinase domain profile. 728 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01283 1036 SUPERFAMILY Protein kinase-like (PK-like) 705 999 IPR011009 -
Pste4g01283 1036 Pfam Leucine rich repeat 476 534 IPR001611 GO:0005515
Pste4g01283 1036 Pfam Leucine rich repeat 187 247 IPR001611 GO:0005515
Pste4g01283 1036 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 225 999 - -
Pste4g01283 1036 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 226 330 - -
Pste4g01283 1036 Gene3D Ribonuclease Inhibitor 294 390 IPR032675 -
Pste4g01283 1036 Gene3D Ribonuclease Inhibitor 1 146 IPR032675 -
Pste4g01283 1036 SUPERFAMILY RNI-like 48 387 - -
Pste4g01283 1036 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 147 225 - -
Pste4g01283 1036 Gene3D Phosphorylase Kinase; domain 1 703 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01283 Pste-Chr4 9432228 9436417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01283 1 1001 Receptor kinase-like Gene Family AT5G56040 36.782 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste4g01283 Pkinase 1.3e-49 CL0016