Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01263 GCGAAAGCATGGAAGGAGAAGGAAGGAAAAGAGAGAATTACCCAATTCCACTGTCCCCTCCTCTTGCTGGAATGTCGAAGGAGATTGAGCTGAGCAGGGCATTGAGGGCCACTTCCAACTCATCTCTCTTCTCTCTATCGCCCTCCGACATCCTATACCAAGACGAGCACCTGATCGCAGTCAACAAGCACCAAGGCATTTACTGCGAGACCCTCCTCTCCTCCCTCGCCTCCCTATCTCCCCAACTCCACCTCGCTAATCGTCTCGACCGCGACACCACCGGCATATTGCTCTTAACCAAGTCCCACAACGTCGCCGCCAAACTCGTCAAGGCCTTCACCCTTCATCAAGTTCACAAAACTTACATTGCCCTATGTACCGGTCCCTCTCCCAATTGGAACCGCCTCACCGTCAGATCCGGTCATGGAAGATCCAAGTTCGGCGCCTGGCGAGTCTACGCTGCTTCCGATGTCGCCCGCTCCCTACCGGGCGGTTCGGTTGTCCGCTCCATGGAGACTTCCTTTCAGGTCTTGTCCATTGACGGAAAGGGAAGCTTCACGGAGGTGTCTGATTCCGATTGGGACCACCAGGGGGAGCATGTTTTAGTCGTTCAACATCAAGCCTTGAAAGAGGATGCCACCGAGAGCGAGATTGTGGTGCGAGCGTATCCTCGGAGTGGAAGGACTCATCAGATTCGATTGCACTGTCAATATCTAGGGATCTCTATCGTAGGAGATGTCAAATATGACGGTGCTTACCACTGGAAAGAGTTGGAGAATGGTGTTCAGAGTGTAGAAGTTATTAACAAGTGTGCTGAAATCCAGCATGCCATTTCTGTTGGAGCTACTTCATTTTTGTTTACCGAGTATAGGTACCTGACTATCTTCATGGGAGTATTTGGTGCAATAATTTTCCTCTTTCTGGGCTCTGTGAAGGGCTTTAGTACCCAAAGTGAACCTTGCACTTACAATGAAGGCAATATGTGTAAACCAGCACTTGCTAATGCTGTCTTTAGCACTGTTGCTTTCCTGCTTGGTGCTCTAACGTCAGTCCTTTCTGGCTTTCTTGGAATGAAGATTGCGACCTATGCCAATGCTAGAACTACTCTTGAAGCAAGAAAGGGAATAGGAAAGGCTTTTGTTACCGCTTTTCGGTCTGGTGCAGTGATGGGCTTTCTTCTTTCTGCAAATGGCCTGTTGGTGCTTTACATTGCCATTAATTTATTCAAACTGTATTATGGAGATGACTGGGAGGGACTTTATGAGTCTATCACTGGCTATGGCTTAGGAGGTTCGTCAATGGCACTCTTTGGAAGAGTTGGTGGTGGCATATACACCAAAGCAGCTGATGTTGGTGCTGACCTGGTGGGGAAAGTTGAGCACAATATCCCTGAAGATGATCCACGAAACCCAGCCGTTATTGCAGATAACGTAGGAGACAATGTTGGAGATATTGCTGGGATGGGTTCGGACTTATTTGGGTCTTATGCAGAATCATCATGTGCGGCTTTGTTTGTGGCATCCGTATCATCATTTGGAACTAATCATGACTACACAGCCATGTCATACCCTCTCATCATAAGCTCCATGGGAATTGTGGTTTGCTTGATTACGACTCTTTTTGCAACTGATCTGTTTGAAATTAAAAACGTGAGCCAAATAGAACCATCCTTGAAAAGACAACTTCTTATCTCAACTATATTAATGACTGCTGGTATTGCCATAGTCAGCTTCACTGCTTTGCCATCAGAATTTACTCTCTATAACTTTGGAGCCGACAAGGTTGTCAAGAACTGGCACCTTTTCTTCTGTGTTGCTATTGGCTTATGGGCTGGACTTGTAATTGGTTACATTACTGAGTACTTCACTAGCAATGCTTACAGTCCAGTACAGGATGTGGCAGATTCCTGCAGGACTGGAGCTGCAACAAATGTGATTTTTGGATTGGCACTGGGATATAAATCGGTCATCATTCCCATATTTGCTATTGCTGTTGCTATTTATGTAAGCTTTAGCCTTGCCGCTATGTATGGAATTGCTGTTGCTGCACTTGGAATGCTCAGTACCATCGCCACTAGTCTTGCCATTGATGCTTATGGCCCAATCAGTGATAATGCTGGGGGTATTGCTGAAATGGCTGGAATGAGACATGAGATACGAGAAAGAACTGATGCTCTGGATGCTGCAGGAAATACCACAGCTGCTATAGGCAAGGGATTTGCTATTGGATCAGCTGCACTTGTGTCTCTTGCATTGTTTGGTGCTTATGTAAGCAGAGCAGGCGTCAAAGCAGTGAATGTGATGACCCCAAAAGTTTTTATTGGTTTGATTGTGGGAGCAATGCTTCCGTACTGGTTTTCAGCCATGACAATGAAGAGCGTAGGGAGTGCAGCTCTCAAAATGGTTGAAGAAGTTCGTAGGCAATTCAATACTATTCCTGGTCTTTTAGAAGGAAGAGCAAAACCTGATTATGCAAATTGTGTAAAGATTTCAACTGATGCCTCACTTAAGGAGATGATCCCTCCTGGTGCATTGGTTTTGCTTACACCACTTATAGCAGGAACATTCTTCGGGGTAGAGACTCTTGCTGGGGTTCTTGCTGGGTCCCTCGTTTCCGGTGTACAGGTAGCAATTTCTGCTTCAAACACTGGTGGTGCATGGGATAATGCCAAGAAATACATAGAGGCTGGAACTACCCCACATGCTGTAGCCCTTGGTCCAAAAGGCTCGGATGCTCACAAAGCAGCTGTCATAGGAGACACCGTTGGAGACCCTCTCAAAGATACTTCGGGTCCCTCACTCAACATTTTGATCAAGCTCATGGCAGTTGAATCATTGGTATTTGCTCCATTCTTCGCTGCTCACGGAGGCTTAATCTTTAATCTAGCAAAAAGTACATGGTTTGCTTTGATTTCACTAATTTTGCCAGTTTTCTGGAATAAGATTGTACAATGTGTAGTATGCAAGCTGGAAGTAGGATCTCATTGT 2987 0.4607 MEGEGRKRENYPIPLSPPLAGMSKEIELSRALRATSNSSLFSLSPSDILYQDEHLIAVNKHQGIYCETLLSSLASLSPQLHLANRLDRDTTGILLLTKSHNVAAKLVKAFTLHQVHKTYIALCTGPSPNWNRLTVRSGHGRSKFGAWRVYAASDVARSLPGGSVVRSMETSFQVLSIDGKGSFTEVSDSDWDHQGEHVLVVQHQALKEDATESEIVVRAYPRSGRTHQIRLHCQYLGISIVGDVKYDGAYHWKELENGVQSVEVINKCAEIQHAISVGATSFLFTEYRYLTIFMGVFGAIIFLFLGSVKGFSTQSEPCTYNEGNMCKPALANAVFSTVAFLLGALTSVLSGFLGMKIATYANARTTLEARKGIGKAFVTAFRSGAVMGFLLSANGLLVLYIAINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVEHNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALFVASVSSFGTNHDYTAMSYPLIISSMGIVVCLITTLFATDLFEIKNVSQIEPSLKRQLLISTILMTAGIAIVSFTALPSEFTLYNFGADKVVKNWHLFFCVAIGLWAGLVIGYITEYFTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVAIYVSFSLAAMYGIAVAALGMLSTIATSLAIDAYGPISDNAGGIAEMAGMRHEIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAYVSRAGVKAVNVMTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLLEGRAKPDYANCVKISTDASLKEMIPPGALVLLTPLIAGTFFGVETLAGVLAGSLVSGVQVAISASNTGGAWDNAKKYIEAGTTPHAVALGPKGSDAHKAAVIGDTVGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLIFNLAKSTWFALISLILPVFWNKIVQCVVCKLEVGSHC 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01263 993 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 235 950 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Pste4g01263 993 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 250 950 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Pste4g01263 993 Pfam RNA pseudouridylate synthase 75 234 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Pste4g01263 993 CDD PseudoU_synth_RluA_like 55 254 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Pste4g01263 993 Pfam Inorganic H+ pyrophosphatase 266 945 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Pste4g01263 993 SUPERFAMILY Pseudouridine synthase 43 256 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Pste4g01263 993 Gene3D Pseudouridine synthase 47 267 - -
Pste4g01263 993 ProSitePatterns Rlu family of pseudouridine synthase signature. 83 97 IPR006224 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Pste4g01263 993 NCBIfam V-type H(+)-translocating pyrophosphatase 266 955 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01263 Pste-Chr4 9291901 9299074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01263 254 823 Primary Pumps ATPases AT1G15690 82.632 0.0 975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01263 4 9291901 9299074 Pste4g01263 4 9291901 9299074 ECH