Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01253 TGAATACTTGTTGGGATGTTAAATATAGTGTAAGCATTGCGCAGTGAGTGGTCATGAAAATGACCCATAACCCCTTTCGGAAAAAGACTTGAGTTTTAGCACACACAATGTGTTTTCTGGTTGCAAGAAGGAGACTTGAAAATGGGGTTCTTCTTCCTATCAAGGACTTTGTTTCTTCTTCAGATTTGGGTTCTTGAGAGAAAATAACTGTCAAAAGGATCTCATTATTTGTTAGAGCAACATTTTTAATGGAGATCCAGAAAAAACGTTTCAAGGGAAGCTTCCTTAGCTTCTTTAACTGGAATGGCAAATCTCAAAAGAAGCTGCTCTGTGACAGTTCTAAGTTACCTGAACTTTCAAAGCAAGGAAAGGAGAACATGGACACCATGCCAAAGTCACAGGTCAATAAGATAGAAATGGTTGACAATGGAGCAAATCCTAGCAATAATGCAAGTTGTGATTTTGATTGTGCCCTATCAATTAATAGTGATGAAAGGTGTGGGACTAAAGCCCCAGGGTTAGTAGCCAAACTCATGGGCTTGGATTCATTGCCAATTTCAACTGCCTCTGAGCTCTCCTCTTCATCCACTTCGTTATATGGCTCCAACTCTCTTAGATCTTCTCATTCTCATGACGAGGATGCTCTTCAGTCAATGGTTGACTATTGTTGTCATGTGGATCCCATCAACATGCAACATAAGCCAGAGAAGTCATCTTGGGGTGTCATTGAATCAAAGGCTCAGAAAGTTGGAAACCCAGCAATGAAGAGATTTCATACTGAAATGTTGCCTCCAAAGTCAGCTAAACCTATTCCAGTTACTCACAACAAACTTTTGTCTCCTATCAAGAGCCCTGGTTATATGCAACCTAAGAATGCTGCTCTTATAATGGAGGCAGCTGCTAAAATAATTGAGGCAGGTCCCCAGCAATGTATGAGGAATAGAATGTCTTCGGCTGGACCTTCTTCTGTTCCCTTAAGAATTCTTGATCTAAAAGAGAAATTGGAGGCTGCCCAATATGAATCCAAGTTCATGGATAGACACACTGCTAACCCTCTGAATGGCAAGCCCAGTGAGAGGAGAAACAATTTATATAAATCCACTCCAAGTTTCAGAGGTTCAAGAGATTCAGAAAAAAACCGCTCTTGTTTGTTGGCAAGCAAAGGAAAATCTGCTTCACTTGCAATGTCACCTAAAACCAACCTTCAGAGCCGTGATGAATTGACTTTGACCGGTAATAGGAGATATATGAAGCAGAAAGAACAGAATCCTATAAAATCAGCTCAGTTGTCCAGGAGCCAGAAGAAACAAATTGCAGACCGTGCTCAGGTCATGCAGCATAGAACTCGTACAGGCCAGAATAGCAATGTTCTGGGGAAGAATAATCAAAAGCAGAATGGTGTAACCAGCAAAGGTAGTTCAGCTTCAAAGGTGGACTCCAGTAAGCCAACACGAACTTGGTCTTCAGAAAGTTCTGATAGAGCAAGGAAGACCACAAATAAGGGTGTTGTAAATGCCAACATTGAACCCAAAAGGTCAGGCACAAGGATAATTGATAACCCAAAGGAAATTCCAGTTTCCAAAAGGAAGAGTATTTCCCAAAAGAAAAACCGTAACAATGGAGATTTTCACAAAGAGGCTAGAGGCTCTGATAATACAGTTAATGATTATGAAAACAAGTCCATAAAAAGCAATATTACAACTGATGGAAGTATTGACCAGAATTTATTTAGCATGAAAGGAAGCAATGGTGTGATTTCATTTACATTTACATCTCCCTTGAGAAGAACCATTCCTGAATCACAGTCCTCTTCTGAGCAAGTGATGGGAACAAGGAACAAAATTGATGTCAATTCTTGTTCCAACAGTGATATGCTTTATCCCCAAAACTCATCATTTTCTCCTCCCAGGTTACATGTAATAGATGGTGATGCCTTAAGTGTTCTTTTGGAGAAAAAGCTGCAAGAATTGACATCTAGAATTAGCGCACCTCGATGTTCCCTTGCGACAGAAGGGTCTTCTACTGGTTTAAGACCTAGTTTGGATGACAAATTTCAAAGTGAGTTAAGCACCACAGTAAGGAAACATGACAGTAGCTTTCATAATAAATTGGACAGCATGCATGTCAATTATTCTTCAAGTGATAATATGGTGCTTAACATGAATCAACAACTGCAGATGTCAGGATCAATGGAAGAGCCTAGCTGTGGCAGCAACTGTGAAGGCAGAAACGAAAATTACTTAGATAGTGCATATGGCAGCACAATTTATTGTTCTATGCAAGAAGAAGAGGTATCTAATTATTCTCCAATGAATGAATCTGTGTCACTTGAAAAGGAGGAAGAATGGTCTGACCAAAGCTCTTCCATACTGACGGGGGATAATATGGTTGCTGTTGAACAATCTAGTGTAATGTCAAATTCAGTCGATTTTACGAGATCAGCAAGGAACTTGGAACTTGAATATGTAAAGGATATACTCAACAATGCAGAGTTGATGACAGAAGAATTTGTAATTGGTGAGACAGATAAGATCATAATGCCAAATCTCTTTGATCTGTGGGAGAATAAGTGCATTGAGGCAGAAAACTATGGAAAGTACTCTAAGATTGAGAGGAAGGTTATATTTGACAGTATGAGTGAGTTCTTAGAATTAAGATGTAGACAAGTTTTTGTTGGAAGTTGCAAAGCATGGCCTAAATGGGTGGCTTCAGTTCAGAGGAAGAGCTGTTTAGCAGAAGAATTGTACAATGAAATGTTGGTTCTTAGAAGTAAGGAAGAAGAGGTAATGGTGGATGAGCTTGTTAGCAAGGACATGAGCACCCCATGGGGTAAATGGCTTGACTTTGACATTGAAGCCTTTCAAGAGGGTTCTGAACTTGAGTTTGATATTTTAACCTGTTTGATTAACGAATTAGTGGCTGATTTGTTGTTCTTCGGTGGCTTACATTAACATATTTCACAATCTATACATGGATAAAGCAATCACATGGCAG 2994 0.3951 MEIQKKRFKGSFLSFFNWNGKSQKKLLCDSSKLPELSKQGKENMDTMPKSQVNKIEMVDNGANPSNNASCDFDCALSINSDERCGTKAPGLVAKLMGLDSLPISTASELSSSSTSLYGSNSLRSSHSHDEDALQSMVDYCCHVDPINMQHKPEKSSWGVIESKAQKVGNPAMKRFHTEMLPPKSAKPIPVTHNKLLSPIKSPGYMQPKNAALIMEAAAKIIEAGPQQCMRNRMSSAGPSSVPLRILDLKEKLEAAQYESKFMDRHTANPLNGKPSERRNNLYKSTPSFRGSRDSEKNRSCLLASKGKSASLAMSPKTNLQSRDELTLTGNRRYMKQKEQNPIKSAQLSRSQKKQIADRAQVMQHRTRTGQNSNVLGKNNQKQNGVTSKGSSASKVDSSKPTRTWSSESSDRARKTTNKGVVNANIEPKRSGTRIIDNPKEIPVSKRKSISQKKNRNNGDFHKEARGSDNTVNDYENKSIKSNITTDGSIDQNLFSMKGSNGVISFTFTSPLRRTIPESQSSSEQVMGTRNKIDVNSCSNSDMLYPQNSSFSPPRLHVIDGDALSVLLEKKLQELTSRISAPRCSLATEGSSTGLRPSLDDKFQSELSTTVRKHDSSFHNKLDSMHVNYSSSDNMVLNMNQQLQMSGSMEEPSCGSNCEGRNENYLDSAYGSTIYCSMQEEEVSNYSPMNESVSLEKEEEWSDQSSSILTGDNMVAVEQSSVMSNSVDFTRSARNLELEYVKDILNNAELMTEEFVIGETDKIIMPNLFDLWENKCIEAENYGKYSKIERKVIFDSMSEFLELRCRQVFVGSCKAWPKWVASVQRKSCLAEELYNEMLVLRSKEEEVMVDELVSKDMSTPWGKWLDFDIEAFQEGSELEFDILTCLINELVADLLFFGGLH 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01253 900 MobiDBLite consensus disorder prediction 272 288 - -
Pste4g01253 900 Pfam DUF761-associated sequence motif 80 104 IPR032795 -
Pste4g01253 900 MobiDBLite consensus disorder prediction 432 470 - -
Pste4g01253 900 Pfam Domain of unknown function (DUF4378) 736 888 IPR025486 -
Pste4g01253 900 MobiDBLite consensus disorder prediction 259 473 - -
Pste4g01253 900 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 892 - -
Pste4g01253 900 MobiDBLite consensus disorder prediction 310 405 - -
Pste4g01253 900 MobiDBLite consensus disorder prediction 110 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01253 Pste-Chr4 9209559 9213718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01253 3 894 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 29.957 5.23e-87 294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01253 4 9209559 9213718 Pste4g01253 4 9209559 9213718 ECH
Pste5g03012 5 23129768 23134253 Pste4g01253 4 9209559 9213718 ECH
Pste5g03012 5 23129768 23134253 Pste4g01253 4 9209559 9213718 PCT