Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01252 CACGATTGACCACCCCCATATGTCACTACCATTAAGCCATTAATACATACAGATCCCCAATCACCCATCCTCTCTCCTCTGTCTTGTCTATGCTTGACAACTCCTCGTTTCTGCAATACAAAAAAAATAAGAAACTGTTTCGCACTCTCTCTGCAAGCACAAACCCAAAAAACAAAGAGACAAAAAAGAAAACTTCACAGACAGAAAGAAAGAAGAGAGAGAAACACGAAACGGAGCACCACTTTAATATGTCAAACACAAATCCATAAGAACCCCAGCCATGACCCAACACAACACTAATGCCTTCATCTTCCAACACCAACACCAACACCAACACCCCAATGCCTCTCTCCTCCGCCGCTGACTTCCTCTGCGCCGAAGACGTCAGCGAAGTCACCTCCGAACACAACCCTCCGCCGCCCCCCTTCCCTCAATTCCTCTCCCCGGATTCCAATGACGCCGCCTCCATCGACGGACTCCTCGACGCCGAGCCCCACCACATGCCGGAAAAGGACTACCTCCGCCGCTGCCGCGACCGCGCCGTCGACGTCACCGCCCGCTTGGACGCCGTCAACTGGATCTTAAAGGTGCACGCATTGTACCAGTTTTCACCGGTCACGGCGTTTCTCTCGGTCAACTATTTCGATCGTTTTCTCTCTCGCTGTTCTCTTCCGCCGCAATCTAGTGGATGGCCGTTTCAACTACTATCCGTGGCATGTTTGTCTCTTGCAGCGAAAATGGAGGAGTCCCATGTGCCATTCTTACTGGACCTCCAAACTTTGGAGCCCAAGTTCGTGTTCGAGCCCAAAACGGTTCAGAGAATGGAGCTTTGGGTCATGTCCAATCTCCAATGGAGACTCCACTCTGTCACTCCCTTTGATTATCTTCATTATTTCATCTCCAAGCTCCCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCCGAATCCATCACCCGCTTCTTCTCCACAGCCTCCAACCTCATTCTCAGCACCACTCGTGTCATTAACTTCTTGGGATTTTCTCCCTCTACCGTCGCCGCCGCCGCCGTCCTTAGCTCGGCCGGCCGCCCCTTTCTTTCCGCCCTCACTTTTCATCACAGACTTAACAGTGAAATGGTGAGATGCTGTCACCAACTAATGGAGGAGTACGTGGTGGACACGTGTCCCGCATCAAGCTCCACCTCTAAAGGCAGGATGGCCGAGGCGGCGCCCCCGTCCAGCCCAGTCGGCGTGCTCGACGCCGCCACCTGTGGCAGCTGCGACACACCCTCCGAGAGGAATTTCGCTGCCTCAAACCACCAACAAGCCCGGCCCCCAAGTAAACGCCTCCGATCCTCTGCTCCCGACGGTGCGCCGCAGGGGTAGATAACGCCGGAACCTCATTCCTGGCATCATATATAATTCATATTCATAAATTTTATAATTACAGTCACAATATATATAATATATAAATGTCTCCTTTCCTTGGATATCTTTTGTCAGGGAGAAAGAGGTTACTTACTTTGTG 1518 0.5184 MPSSSNTNTNTNTPMPLSSAADFLCAEDVSEVTSEHNPPPPPFPQFLSPDSNDAASIDGLLDAEPHHMPEKDYLRRCRDRAVDVTARLDAVNWILKVHALYQFSPVTAFLSVNYFDRFLSRCSLPPQSSGWPFQLLSVACLSLAAKMEESHVPFLLDLQTLEPKFVFEPKTVQRMELWVMSNLQWRLHSVTPFDYLHYFISKLPSSSSSSSSSSSSSSESITRFFSTASNLILSTTRVINFLGFSPSTVAAAAVLSSAGRPFLSALTFHHRLNSEMVRCCHQLMEEYVVDTCPASSSTSKGRMAEAAPPSSPVGVLDAATCGSCDTPSERNFAASNHQQARPPSKRLRSSAPDGAPQG 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01252 358 CDD CYCLIN_AtCycD-like_rpt2 190 284 - -
Pste4g01252 358 CDD CYCLIN_AtCycD-like_rpt1 86 185 - -
Pste4g01252 358 SMART Cyclin_C_2 190 309 IPR004367 -
Pste4g01252 358 MobiDBLite consensus disorder prediction 327 358 - -
Pste4g01252 358 Pfam Cyclin, C-terminal domain 190 291 IPR004367 -
Pste4g01252 358 ProSitePatterns Cyclins signature. 87 118 IPR006671 -
Pste4g01252 358 MobiDBLite consensus disorder prediction 327 345 - -
Pste4g01252 358 SUPERFAMILY Cyclin-like 58 188 IPR036915 -
Pste4g01252 358 PANTHER CYCLINS 53 289 IPR039361 -
Pste4g01252 358 FunFam D2/4-type cyclin 70 188 - -
Pste4g01252 358 MobiDBLite consensus disorder prediction 29 49 - -
Pste4g01252 358 Pfam Cyclin, N-terminal domain 62 187 IPR006671 -
Pste4g01252 358 Gene3D - 70 188 - -
Pste4g01252 358 Gene3D - 60 264 - -
Pste4g01252 358 SMART cyclin_7 92 181 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01252 Pste-Chr4 9208350 9210267 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01252 17 290 Core Cell Cycle Gene Families AT1G70210 41.754 1.40e-60 196
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01252 4 9208350 9210267 Pste4g01252 4 9208350 9210267 ECH