Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01244 TCCCGAGGCAAAAAGACAGACAGAATCAGAGGGGGCAAAGAAAATCCTTGCAGGAGAGTGCAAGTCCCCTCCCTCTCTTGCTCCTTCTGGTCAGGCTTTGGTAATATACATAAGAAGCAATGGCCAGTTTTGCAGGTACCACACAAAAATGCATGGCTTGTGACAAAACTGTCTACCTTGTTGACAAGCTCACTGCAGATAACCGTGTCTTTCACAAGGCCTGCTTCCGATGCCACCACTGCCGTAATACCCTTAAGCATTGCTAGCGGAACACCCAAAATTCAGAAACCAGAGAAACAGATCACTGATTCTGAGAATAGTAAGGTCATCGCAAACGTGTTCTTGGGCACCAGAGACAAATGTGTGTGCTGCAAAAAGACAGTGTATCCCACTGAGAGGGTTACTGTTAATGGAACACCCTACCACAAGGGCTGCTTCAAATGTACCTATGGAGGCTGTACTATAAGCTCATCAAACTTTATCACACACGAGGGAAAGCTCTACTGCAAACACCATCACATTCAACTTTTCAAAGAAAAAGGGAATTACAGTCAGCTCGAGAATGAAGTTGCTACATCGGAAATCCCTGCTTGATGTGAAAGTACAGTACTAGAATGCTAGCAGTCTTGTGTTGTACCGTGGATGCACCATTTTCAGCTCCTTATAACAGGGTTATCCTTTTATAATAGAGTCATGATAAA 701 0.4422 SRGKKTDRIRGGKENPCRRVQVPSLSCSFWSGFGNIHKKQWPVLQVPHKNAWLVTKLSTLLTSSLQITVSFTRPASDATTAVIPLSIASGTPKIQKPEKQITDSENSKVIANVFLGTRDKCVCCKKTVYPTERVTVNGTPYHKGCFKCTYGGCTISSSNFITHEGKLYCKHHHIQLFKEKGNYSQLENEVATSEIPA 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01244 197 PANTHER OS06G0237300 PROTEIN 48 188 - -
Pste4g01244 197 FunFam LIM domain and actin-binding 1 115 185 - -
Pste4g01244 197 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 147 186 - -
Pste4g01244 197 Pfam LIM domain 121 176 IPR001781 -
Pste4g01244 197 Gene3D Cysteine Rich Protein 116 185 - -
Pste4g01244 197 SMART lim_4 120 172 IPR001781 -
Pste4g01244 197 CDD LIM2_SF3 121 181 - -
Pste4g01244 197 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 113 146 - -
Pste4g01244 197 ProSiteProfiles LIM domain profile. 119 179 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01244 Pste-Chr4 9111990 9113914 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste4g01244 LIM 1.1e-10 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01244 4 9111990 9113914 Pste4g01244 4 9111990 9113914 ECH