Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01235 GCACTTCTCAGAATCCCAAGGATCTACACGTTAATTCTTCTTTCTCTTCCTTTCAGAAACTTGGGTAACAATTATGGTGCCATTTGTCCCATCATAGAAGCTCTTTATGGAAGGCTTGGATTATATTCTTTTAGCCAAGCAATGGAGCCACAGTTAGCCTTACCATTCTCTGTTCTATCTGTTGTCGAAGAAGTTCTTCAAAAGCATGGAAGTCCTTTAAGTGACATTGACTTGGCATCAAGGAAGGCTGAAGAAGCTTCCTCAAGAAGGAATGAAGCTGCTGAGTGGTTACGAAAGACGGTAGGAATTTTTGGAGGAAAAGACATGCCAAGTGAGCCTACTGAAGAAGAGTTTAGGATTGCCTTGCGTAGTGGCATTGTCCTATGTAATGCTCTTAACAAAATACAACCTGGAGCAGTGCCGAAGGTAGTTGAAGCCCCTAGCGATATCGTTATTATTCCTGATGGGGCAGCTTTGTCTGCTTATCAATATTTTGAAAATGTAAGGAATTTTCTAGTAACAATGGAGGAAATTGGGCTTCCCACCTTTGAGGTTTCTGATTTGGAACAGGGCGGGAAATCTTCAAGGATAGTGAATTGTGTTTTAGCACTCAAGTCTTATAGTGAATGGAATTTGGGAGGAAAAAATGGGTTATGGAAATATGGTGGAAATCCAAAGCCATCTGCCTCAGTAAAACCACCTATTTTGAGGAAAAACTTAGAACCATTCATGAGGTCTTTATCAAGGGGTATTTCGTTGGGCGATAAAGATGGTTTAATTAGTGATAAGTCTCCAAACAGTGATGTGAAGCATGATCTTAGTAAAGTGGGTTCTATTCCCTCATTGGATTCACTAGTTCGTGAAATTTTATTTAATAAGAAGCTAGAAGATATTCCCATTGTGGTGGAGTCTCTACTTAGCAAAGTCATGGAGGAATTTGAACAACGTTTGCTAATTCAACCTGAAACATTCAAAACCACTCAAGAAGATAAAGCACCACTCGAATTGAACATTGCTTGTGATGATGAAAAGATGGAAGAAGATGAACGTGTAGATGCTAAACAAAAGGAAAATGATGACAAGTATAATGGCAATGAAAAATCAAGTAACCAAACTTTGAAGCAACAGAAGTTGTTTCAGCATCAAAATGAAAACGTCCAGGAATTGAAAATGATGGTTCATCAAACAAAAATGGGAATGCAAGTTCTGCAACATAAATATCAGGAGGATATCCTATATCTACGTACGTATACTGCTAAGTACTACCTACCCTTAATAGGTAAGCACATGCTTGGCCTAGCTTCTGCTGCTTCTAGATATCAGAAAGTTCTAGAAGAAAATCGCAAGTTATATAATCAGTTACAAGACCTGAAAGGAAATATTAGGGTGTACTGTAGAGTTCGACCCTCAAAAAGTGGACAACAAAACCATAATTGCTCCGTTAGTAACATAGATGAAGGAAGTATTTCACTCATAATACCTTCCAAAAATGGGAAAGAGGGGAAGAAGACATTTAATTTCAATAGAGTGTTCGATCCTTCTTCAACCCAAGGAGAGGTTTTCGCAGATACACAACCATTGATTCGTTCAGTTCTTGATGGCTACAATGTGTGTATATTTGCTTATGGCCAGACAGGATCGGGAAAAACACACACTATGTCTGGACCAGACAATTATACTGAGGAAACAGTAGGTGTCAACTACCGCGCATTAAGAGATCTTTTCCTTCTTTCGGAGCAGAGGAAAGACATTATTCACTATGATATATACGTTCAAATGCTTGAGATTTATAATGAGCAAGTTAGAGACTTATTAAACACAGACAAAATTCGCAACAGTTCCCACAATGGCATTAACGTGCCAGATGCAAATCTAGTTCCTGTTTCATCCACTTCCGATGTCTTAAATTTAATGAACTTGGGACAAAAGAATCGGGCAGTTAGTTCCACTGCCATGAATGACCGGAGTAGTCGTTCTCATAGTTGCTTGACAGTTCATGTTCAAGGAAGGGAGCTTGCATCAGGGAATAGTCTTCGTGGTTGTATCCATTTAGTTGACTTGGCAGGAAGTGAGAGGGTTGATAAATCTGAGGTCACAGGAGATAGGCTGAAGGAGGCTCAACATATTAACAAGTCACTTTCTGCTCTAGGAGATGTCATTGCTTCACTTGCCCAAAAGCAATCACATGTACCTTATAGGAATAGTAAACTTACTCAGTTGCTTCAAGATTCTCTTGGAGGTCAAGCAAAGACACTAATGTTTGTTCATGTTAGTCCGGAGGCTGAAGCCCTTGGAGAAACAATTAGTACATTGAAGTTCGCAGAAAGGGTCTCCACTGTTGAACTTGGTGCTGCACGTAACAAGAAAAAGGCTACAGACAAGCTTATGAAAAGACGAAGCTTAGATCCCATGGACATTTATAGAAATTCACCCCAATGGCCAAATCATGCAGGAGTAAATGGAAATGAGGATGATAAGGAATCGGTTTCTGGGGATTCTGTTGGTAAAAGTACAAAAAGTAATGGTCGCATAACTATTGATCATAGCCTCATGGAACAATTTGACACAGAAAGCCAACGGTCATCTTCTCCAATGTCAAGTCCCACATTTCCTTTTGACTCTTCAAAAATACGCATGGAGGCGGCCACCACAAATGACTATGATGAACTTGAGCTAGCAACTAGTGAAAGTTCAGAATCAGACAAGAGTTGGCAATCAAATGTGCATATGCCTAAAACAACCTCTCTTTCCAATGGACTAGTGTCTAAAACAAGGAAATCAGCTCATCCTCGACAAGTAAAGAACCAAGAAACTAGGTCTATGATCCCGTCATTGTCTCCATCACCAAGGAAAAAAACCACCGTAGTTAGTCAACTAAGAAAGCATCCAGATGCAAAAAGAAAAAATGGAAATGCCAAA 2919 0.396 ALLRIPRIYTLILLSLPFRNLGNNYGAICPIIEALYGRLGLYSFSQAMEPQLALPFSVLSVVEEVLQKHGSPLSDIDLASRKAEEASSRRNEAAEWLRKTVGIFGGKDMPSEPTEEEFRIALRSGIVLCNALNKIQPGAVPKVVEAPSDIVIIPDGAALSAYQYFENVRNFLVTMEEIGLPTFEVSDLEQGGKSSRIVNCVLALKSYSEWNLGGKNGLWKYGGNPKPSASVKPPILRKNLEPFMRSLSRGISLGDKDGLISDKSPNSDVKHDLSKVGSIPSLDSLVREILFNKKLEDIPIVVESLLSKVMEEFEQRLLIQPETFKTTQEDKAPLELNIACDDEKMEEDERVDAKQKENDDKYNGNEKSSNQTLKQQKLFQHQNENVQELKMMVHQTKMGMQVLQHKYQEDILYLRTYTAKYYLPLIGKHMLGLASAASRYQKVLEENRKLYNQLQDLKGNIRVYCRVRPSKSGQQNHNCSVSNIDEGSISLIIPSKNGKEGKKTFNFNRVFDPSSTQGEVFADTQPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPDNYTEETVGVNYRALRDLFLLSEQRKDIIHYDIYVQMLEIYNEQVRDLLNTDKIRNSSHNGINVPDANLVPVSSTSDVLNLMNLGQKNRAVSSTAMNDRSSRSHSCLTVHVQGRELASGNSLRGCIHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVIASLAQKQSHVPYRNSKLTQLLQDSLGGQAKTLMFVHVSPEAEALGETISTLKFAERVSTVELGAARNKKKATDKLMKRRSLDPMDIYRNSPQWPNHAGVNGNEDDKESVSGDSVGKSTKSNGRITIDHSLMEQFDTESQRSSSPMSSPTFPFDSSKIRMEAATTNDYDELELATSESSESDKSWQSNVHMPKTTSLSNGLVSKTRKSAHPRQVKNQETRSMIPSLSPSPRKKTTVVSQLRKHPDAKRKNGNAK 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01235 973 MobiDBLite consensus disorder prediction 897 925 - -
Pste4g01235 973 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 460 791 IPR027417 -
Pste4g01235 973 Gene3D - 79 209 IPR036872 -
Pste4g01235 973 Pfam Kinesin motor domain 466 779 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste4g01235 973 PRINTS Kinesin heavy chain signature 650 667 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste4g01235 973 PRINTS Kinesin heavy chain signature 681 699 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste4g01235 973 PRINTS Kinesin heavy chain signature 730 751 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste4g01235 973 PRINTS Kinesin heavy chain signature 534 555 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste4g01235 973 CDD CH_AtKIN14-like 89 206 - -
Pste4g01235 973 SMART kinesin_4 458 788 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste4g01235 973 MobiDBLite consensus disorder prediction 957 973 - -
Pste4g01235 973 Pfam Calponin homology (CH) domain 88 209 IPR001715 GO:0005515
Pste4g01235 973 SUPERFAMILY Calponin-homology domain, CH-domain 81 221 IPR036872 -
Pste4g01235 973 MobiDBLite consensus disorder prediction 833 876 - -
Pste4g01235 973 MobiDBLite consensus disorder prediction 934 954 - -
Pste4g01235 973 ProSiteProfiles Kinesin motor domain profile. 460 780 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste4g01235 973 CDD KISc_C_terminal 458 782 - -
Pste4g01235 973 Gene3D Kinesin motor domain 424 782 IPR036961 -
Pste4g01235 973 ProSiteProfiles Calponin homology (CH) domain profile. 87 209 IPR001715 GO:0005515
Pste4g01235 973 SMART ch_5 89 207 IPR001715 GO:0005515
Pste4g01235 973 MobiDBLite consensus disorder prediction 891 973 - -
Pste4g01235 973 MobiDBLite consensus disorder prediction 341 372 - -
Pste4g01235 973 PANTHER KINESIN-LIKE PROTEIN KLP-3 94 936 IPR027640 GO:0003777|GO:0007018
Pste4g01235 973 Coils Coil 440 460 - -
Pste4g01235 973 FunFam Kinesin-like protein KIN-14I isoform A 455 802 - -
Pste4g01235 973 MobiDBLite consensus disorder prediction 802 876 - -
Pste4g01235 973 MobiDBLite consensus disorder prediction 341 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01235 Pste-Chr4 9041120 9050323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01235 448 836 Calmodulin-binding Proteins AT5G65930 40.201 1.76e-76 271