Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01223 CGACACCCGAACATGGACACCCAGCCCTCCACACCTTTGCTTTCTGGAAGTTTCAGCTGGGCTTGTGGAAATTACATCCTATTCTTTAGACCACAACAACTCCTTCTGCTACTGCCTCTCTAGTTCCTTCTTCTTCATCTTCACGCCAACAAGTCCAAGATTCTGTACTATATACATAAAGTCAAGAGAAGAGGCATAATAAGCAGCGTTCAGTGGTGGAATCATATTGCAGTCTAAATGGGACATTTTTCATCCGCGTTCAATAGGTGGGCAAAGTCGCTTGCAACAAAGAAAAGTAAAAGTTCTGATGAATGTAATGGAAGAGAAGCTGCAGAAGCAATGGCAAAGGAAGCCAAAAAAAATAACTTCATATTACATAGCTCAGGCACTGTTAATGTTGATGGTTCAAAAAACTTTGCCTCCGTTTTTTCCAAAAAAGGCAAAAAAGGAGTCAACCAGGATTGCTGCGCAGTGTGGGAAGAATTTGGATGCCAAGAGGACATGATCTTCTGCGGGATATTTGATGGGCACGGGCCATGGGGTCACTTTGTGGCCAAAAGAGTAAGAGAGTCAATGCCACCATCTTTGCTATGCAACTGGCAGGAGACACTTTCCCAAACTTCACTTGATCCAGATATTGATGTTGATATAGAGACAGAGAAAAAGCAACACTGCTTTAATATATGGAAGCATTCCTACTTGAAGACTTGTGCTGTCATAGATCGAGAACTAAAGCAGAATCGCAAGATAGATTCATTTTTCAGCGGAACAACTGCCTTGTCAATTGTTAGGCAGGGTGAATTCATTGTCATTGCAAATGTTGGTGACTCTCGTGCTGTGTTGGCTACAACATCAGATGATGGAAGTTTGGTACCAGTTCAGCTGACAGTAGATTTCAAGCCCAATTTACCTCAGGAAGCAGAACGAATACTTGAGTGCCAAGGACGTGTGTTCTGCTTAGAGGATGAGCCTGGAGTGCATAGGGTGTGGTTGCCGGATGAGGAGTCTCCAGGACTTGCCATGTCAAGGGCTTTTGGTGACTACTGTGTCAAAGAGTATGGTCTCATTTCAGTGCCTGAGGTAACGCAGAGGAATATAACCAGCAAAGACCAGTTTGTTGTGCTAGCAACTGATGGGGTGTGGGATGTAATATCGAACCAAGAAGCGGTGGATACTGTATCCTCAACGCCAGACAGAACAGACTCGGCTAAACGTTTGGTGGAGTGTGCAATGCGTGCATGGAAACGCAAGAGGAGGGGCATTGCAATGGATGATATTTCAGCTATTTGTCTCTTCTTTCACTCTTCACCTTCGCCAGACCAAGTTGTCACCCCAGTACAATAGAGCATTTATCATGTAAAATTGATGAGTCAAGTGCCACTTGCAGTTTGATCCATGTAAACATGGTCCTATATATTAAGGTTGATTCATTAGACGCTGTCATGTCTTAATCTCGTCATTAATTTATTAACCTA 1475 0.4346 MGHFSSAFNRWAKSLATKKSKSSDECNGREAAEAMAKEAKKNNFILHSSGTVNVDGSKNFASVFSKKGKKGVNQDCCAVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPPSLLCNWQETLSQTSLDPDIDVDIETEKKQHCFNIWKHSYLKTCAVIDRELKQNRKIDSFFSGTTALSIVRQGEFIVIANVGDSRAVLATTSDDGSLVPVQLTVDFKPNLPQEAERILECQGRVFCLEDEPGVHRVWLPDEESPGLAMSRAFGDYCVKEYGLISVPEVTQRNITSKDQFVVLATDGVWDVISNQEAVDTVSSTPDRTDSAKRLVECAMRAWKRKRRGIAMDDISAICLFFHSSPSPDQVVTPVQ 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01223 368 Gene3D - 49 356 IPR036457 -
Pste4g01223 368 Pfam Protein phosphatase 2C 84 331 IPR001932 -
Pste4g01223 368 ProSiteProfiles PPM-type phosphatase domain profile. 60 354 IPR001932 -
Pste4g01223 368 FunFam Probable protein phosphatase 2C 34 51 356 - -
Pste4g01223 368 SMART PP2C_4 51 352 IPR001932 -
Pste4g01223 368 CDD PP2Cc 59 354 IPR001932 -
Pste4g01223 368 SUPERFAMILY PP2C-like 58 356 IPR036457 -
Pste4g01223 368 PANTHER PROTEIN PHOSPHATASE 35 352 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01223 Pste-Chr4 8970234 8973569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01223 1 355 PP2C-type Phosphatase Gene Family AT3G05640 70.588 0.0 532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01223 4 8970234 8973569 Pste4g01223 4 8970234 8973569 ECH
Pste5g03038 5 23430891 23433524 Pste4g01223 4 8970234 8973569 PCT
Pste7g01879 7 17214053 17215300 Pste4g01223 4 8970234 8973569 PCT