Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01219 ATGGAACCTGTTCAACTGATTTCTGAAGAATGGGGTTCTCTTTGTGGTTTACACACGACTGAAGAAGCTGACTTCATGGCTCAGTTGTTTGGTGGTAACTACTCTGTCACAGAAAAGCACTGTGGAAATACCAGTTTTGCCTTTTGGCCTGACCATGAATCCACAATAATGACCATGACAGGCACTACTAGCAATTCATTCTTTCCTTCAAATGTTACAGATAATTTTTTAAGTTACTCACAAGGGAGTAGCTCCAGCACTGATAGTGTTGACAACATTTTTTGCACTACTAGTAGTGGAACCAACTCCTGTGACCCAGCAACAAACTTTGACTCTCCATCCATGGTTTTTTGCCTGGGAGATGCCAAATCTAGTCCCCATAGTTTTCCATGGAATGACTACTTAAGCCAACAGATAAATGACAACGCCGATGAAGAGTCAAGTCTAGACCTAGTTGCTTTTGCTGACAACAATTTGCAAGCTAGGAGAGAGTATGAAATGATGGTTTCTGAATCTGTGCAAGAGGATACAAGCAGAAACCTGGAGAACCCAACAAAAAGATTTAAGAGCTCAATAGAGGTCTCAAAAACATTGAGTAATGCTAAATCAAGGAAGAATCCAAAATCTGGTTCAACGAGCAACTATGGAGATGATAGAAGCTTGAGCCTCCAAAGGCATAGTTGTTTTTCACAGTGTGACTCTAATGCTTCTCTGGAGCCAAGTGGAGGGGCGTCAAAAGACCCTGCTGTGCCCAATTTGTTTAGAAAATCAAGAGCAACCACTGGCCCTGCCACTGATCCACAGAGCCTTTATGCAAGAAAGAGAAGAGAAAGAATAAACGAAAGGTTGAGAATATTGCAAAATCTTGTCCCCAATGGAACTAAGGTGGATATCAGCACCATGCTTGAGGAAGCTGTCCAATACGTTAAGTTTTTACAGCTCCAAATTAAGCTTCTGAGCTCTGACGATATGTGGATGTATGCTCCAATTGCTTACAATGGAGTAAACATTGGACTAGACATCGGTATTCCTCCAACCAAAGGAAGATGA 1050 0.4171 MEPVQLISEEWGSLCGLHTTEEADFMAQLFGGNYSVTEKHCGNTSFAFWPDHESTIMTMTGTTSNSFFPSNVTDNFLSYSQGSSSSTDSVDNIFCTTSSGTNSCDPATNFDSPSMVFCLGDAKSSPHSFPWNDYLSQQINDNADEESSLDLVAFADNNLQARREYEMMVSESVQEDTSRNLENPTKRFKSSIEVSKTLSNAKSRKNPKSGSTSNYGDDRSLSLQRHSCFSQCDSNASLEPSGGASKDPAVPNLFRKSRATTGPATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDMWMYAPIAYNGVNIGLDIGIPPTKGR 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01219 349 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 263 312 IPR011598 GO:0046983
Pste4g01219 349 Gene3D - 267 328 IPR036638 GO:0046983
Pste4g01219 349 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 99 335 - -
Pste4g01219 349 SMART finulus 269 318 IPR011598 GO:0046983
Pste4g01219 349 MobiDBLite consensus disorder prediction 170 219 - -
Pste4g01219 349 Pfam Helix-loop-helix DNA-binding domain 273 313 IPR011598 GO:0046983
Pste4g01219 349 CDD bHLH_AtIND_like 264 326 - -
Pste4g01219 349 MobiDBLite consensus disorder prediction 234 272 - -
Pste4g01219 349 FunFam Basic helix-loop-helix transcription factor 264 321 - -
Pste4g01219 349 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 267 329 IPR036638 GO:0046983
Pste4g01219 349 MobiDBLite consensus disorder prediction 171 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01219 Pste-Chr4 8948023 8949597 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01219 230 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 75.000 3.05e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste4g01219 HLH 1.4e-08 No_clan