Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01210 AGCATAAGTCTCTTCATGCATCAACCTATTGCTATGGCCACAAACATGAAGACATGGAACTTGTACACCCTTGTTTTCCTCTTCAACCTCTTTCTTTCTTCCTCTCATGCAGCTTTCTCTCCAAATAACACATGCGACAATACACCCTACCCAGCATTCTGCAGAACTACTCTGCCATCTCAATATTTACCCATCCATGACCAATGCCATTTCTTCCTTCAACAATCCTTATCAATAACAAAAACCATTTTCAAAATGGTCTCTTCTTATCTCAAAGACAACTACACCATTCCTGGTTCAACAGTACACGCCCTTGAAGATTGTCTTAATCTTACAGAACTGAACATCGATTACTTGTTCAATGTCCTCCACGCCATTGGAAAAATCGTGACTAGCGATCAGGTATATGATTTGCAAACCTTGCTCAGTGCAATTTTAACCAACCAACAGACGTGTTTGGATGGTTTTAATGAGGTAACACCCTATCCTAGAGTCACCAGTGCCTTATCAAGTCCACTTTCTGATTCAATCAAACTATATAGCATATCTTTAGCTCTTTTCACCCGTGGTTGGGTTAGCGATGCCACCACAGGAAGGTTAACTACAGTTGAGATTATTACTAATAGACAGTTACTGCAAACAAGCGTTGACAATGTGGTGGTGACACAAAGAGTGGTGGTGAACCCAGATGGGTCTGGGGATTTCACCACCATAAATGACGCAGTACATGCTGCACCTAACAATACCGGCATCAGCAACGGGTACCACGTAATTTATGTTGTTGCTGGGATTTACAATGAATACGTGTCTATTCCTAAGAGCAAGCAGAACCTAATGCTCGTTGGAGATGGCATCAACCGTACCGTGCTCACTGGCGGTCACAGCGTGGATGATGGCTGGACCACTTTCCAATCTGCCACTTTCGCTGTAGTTGGAAAAGGGTTTGTTGCAGTGAACATAACATTTCGTAACACGGCGGGGTCCAGCAAGCATCAAGCGGTGGCAGTGAGAAACGGGGCAGACATGTCCACGTTCTACAAATGTAGTTTTGAAGGTTACCAAGACACACTGTACGTACATTCCCTAAGGCAATTCTACAAAAACTGTGACATTTATGGCACAGTGGATTTCATATTTGGCAATGCAGCAGCAGTGTTCCAGGATTGTAACATGTATCCAAGGCTTCCTATGCAAAACCAATTCAACGCAATCACAGCACAAGGCCGAATGGATCCAAACCAAAACACAGGCATCTCCATACAGAACTGTTGCATGAAAGCAGCCAGGGACTTAGGTGATGCTACTAGCAATTATAACGGCATAAAGACATATTTGGGTAGGCCTTGGAAAAAGTATTCAAGAACTGTTTACATGCAGTCTTTAATCGATGGCCTAATTGATCCAAAGGGTTGGACTGAATGGTCAGGGGATTTTGCTTTGAGCACGCTGTATTATGCAGAGTTTGCTAACTGGGGACCTGGTTCAAACGTTGCCAATAGGGTCACATGGCAAGGATACCATCTCATTGATGAAAAGGATGCAAATGATTTCACGGTGAACAAGTTTATTCAAGGTGACAGGTGGCTTCCCAAGACAGGAGTACCTTTCAAAGCTGGTTCTTCACCTGGTCATGTTATGAAGATGTACGCTCCAAAAGGGTTGACTGAGGATTGCCATAGCCTTCAGGCCCTTCCCCAGTTTCCCTTGACTTCTCTACGCAACAATACGCCCAAGAATCAAATATACAAGTTAAAACATACAAAAGAAAAAAAGAAACCACAAAGCTCCGTTATATTTTATTTGAATTTACGTATTACTCTTAGTGTTATTGAATTGGATATATTTAATTTGAAGGTGCTGATAGGGGGAAATGGAGGAAAGAAGAGGAGAATAGCTATCATTAGCATGTCTACCATCTTCCTAGTGGCTATGGTTGTTGCTGTGACAGTTAGCGTGAACGTGAACATAGATGGTTCCAACAAGAATCAACAAGATAACAGGGGAGGTATTGCGTCCACTGTGAAAGCTGTGAGAACTCTTTGCAAACCAACAGATTACCGAAAAGAATGTGAGAAAAGCCTTAGATCAGAAGCCGGGAACACCACGGACCCAAGAGAACTCATTAAAATTGCCTTCAATGTTACCATTAAAAAAATAAGTAATGGAATAAAAAAAACAGATCTCATGCGCGAGGTAGAGCATGACCCAAGAGCTAAGATGGCACTTGCCACGTGCAAACAACTCATGGAACTTTCCATTGGGGAATTCAAGAGGTCACTTGACAGAATGGGAAAGTTTGATCTCGACAATTTCGACAACATCTTAAATAGTTTAAGGGTTTGGCTTAGCGGTGCAATCACGTACCAAGAAACCTGCTTGGATGGCTTCAAGAACACCAACCACAGTATAGGGAAGAAGATGAGGAACGTGTTAAAAAATACCATGCACTTGAGTAGCAATGCCCTTGCCATCATCACTGAACTTGCAAACACTGTCTCGGAAATGAATGGGACAGTCGATGAACTTCAACATCGTAGGCTTGTTGAGGAACATGTTTTTGGTCACCATGAGGTTGTTCCCTCGTGGATTGAGAATGCTGTTGCCGTTCGCAAACTCCTTCATCAACCTCCCGACAAAATCAAGCCTAGTGCGGTTGTCGCCAAAGATGGTAGCGGAAAGTTCAATAGCATCAACCAGGCATTGAAGAAAGTGCCTAAGATGAACCATAAACCATTTGTCATTTACATTAAGGAAGGTGTTTACCATGAGTACGTTGAAGTCACTAAGAAAATGACCCACGTGGTGTTTGTGGGTGATGGTAGCAACAAGACACGAATCACTGGCAACAAAAACTTCATAGATGGGGTCAATACTTATAGAACCGCTACTGTTGCTATTCAAGGAGATTACTTTGTGGCGATGAACATAGGGTTTGAGAATACTGCTGGGCCCCACAAACATCAAGCAGTAGCCATAAGGGTCCAAGCGGACAAATCGATATTCTACAGATGCTCAATGGATGGGTATCAGGACACGCTGTATGCACATACCATGAGACAGTTTTATAGAGATTGCACCATTTCAGGAACCATAGACTTTGTGTTTGGTGATGCAGTGGTGTTTTTTCAAAACTGCAAGTTCGTGGTGAGAAAGGCATTGAAAAACCAACAATGTATTGTGACAGCACAAGGTAGAAAAGAGAGGCATCAACCATCAGGAATAGTGATCCAAGGGGGTTCAATAGTGGCGGATAATAAAGTGAAGTTTGATAACAAGGCATACCTAGCCCGTCCATGGAAGAATTATTCAAGGGCAGTGTTTAGGGACTCATATATTGGGGATTTGATTCAACCAGATGGTTATTTGGCATGGCAAGGACCAAATGGTCTTACAGGTATGGACACTTGTTTCTATGCGGAGTTCAATAACACTGGTCCAGGTTCAAACAAATCCAAGCGTGTCAAATGGCGTGGGATCAAGACCCTCTCTTCAAAATCCGCAAGCCGTTACGTACCATACAAATTTTTTCATGGAGATGATTGGATTAAAATTACTAGGATTCCATACTCCTTTGCTGCCACCGCCCCCAAGCACTAA 3597 0.4279 SISLFMHQPIAMATNMKTWNLYTLVFLFNLFLSSSHAAFSPNNTCDNTPYPAFCRTTLPSQYLPIHDQCHFFLQQSLSITKTIFKMVSSYLKDNYTIPGSTVHALEDCLNLTELNIDYLFNVLHAIGKIVTSDQVYDLQTLLSAILTNQQTCLDGFNEVTPYPRVTSALSSPLSDSIKLYSISLALFTRGWVSDATTGRLTTVEIITNRQLLQTSVDNVVVTQRVVVNPDGSGDFTTINDAVHAAPNNTGISNGYHVIYVVAGIYNEYVSIPKSKQNLMLVGDGINRTVLTGGHSVDDGWTTFQSATFAVVGKGFVAVNITFRNTAGSSKHQAVAVRNGADMSTFYKCSFEGYQDTLYVHSLRQFYKNCDIYGTVDFIFGNAAAVFQDCNMYPRLPMQNQFNAITAQGRMDPNQNTGISIQNCCMKAARDLGDATSNYNGIKTYLGRPWKKYSRTVYMQSLIDGLIDPKGWTEWSGDFALSTLYYAEFANWGPGSNVANRVTWQGYHLIDEKDANDFTVNKFIQGDRWLPKTGVPFKAGSSPGHVMKMYAPKGLTEDCHSLQALPQFPLTSLRNNTPKNQIYKLKHTKEKKKPQSSVIFYLNLRITLSVIELDIFNLKVLIGGNGGKKRRIAIISMSTIFLVAMVVAVTVSVNVNIDGSNKNQQDNRGGIASTVKAVRTLCKPTDYRKECEKSLRSEAGNTTDPRELIKIAFNVTIKKISNGIKKTDLMREVEHDPRAKMALATCKQLMELSIGEFKRSLDRMGKFDLDNFDNILNSLRVWLSGAITYQETCLDGFKNTNHSIGKKMRNVLKNTMHLSSNALAIITELANTVSEMNGTVDELQHRRLVEEHVFGHHEVVPSWIENAVAVRKLLHQPPDKIKPSAVVAKDGSGKFNSINQALKKVPKMNHKPFVIYIKEGVYHEYVEVTKKMTHVVFVGDGSNKTRITGNKNFIDGVNTYRTATVAIQGDYFVAMNIGFENTAGPHKHQAVAIRVQADKSIFYRCSMDGYQDTLYAHTMRQFYRDCTISGTIDFVFGDAVVFFQNCKFVVRKALKNQQCIVTAQGRKERHQPSGIVIQGGSIVADNKVKFDNKAYLARPWKNYSRAVFRDSYIGDLIQPDGYLAWQGPNGLTGMDTCFYAEFNNTGPGSNKSKRVKWRGIKTLSSKSASRYVPYKFFHGDDWIKITRIPYSFAATAPKH 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01210 1198 Pfam Plant invertase/pectin methylesterase inhibitor 42 186 IPR006501 GO:0004857
Pste4g01210 1198 Pfam Plant invertase/pectin methylesterase inhibitor 676 824 IPR006501 GO:0004857
Pste4g01210 1198 Coils Coil 825 845 - -
Pste4g01210 1198 CDD PMEI-like_3 45 191 - -
Pste4g01210 1198 Pfam Pectinesterase 884 1179 IPR000070 GO:0030599|GO:0042545
Pste4g01210 1198 Pfam Pectinesterase 225 526 IPR000070 GO:0030599|GO:0042545
Pste4g01210 1198 SUPERFAMILY Pectin lyase-like 883 1191 IPR011050 -
Pste4g01210 1198 SUPERFAMILY Pectin lyase-like 223 538 IPR011050 -
Pste4g01210 1198 Gene3D Invertase/pectin methylesterase inhibitor family protein 672 830 IPR035513 -
Pste4g01210 1198 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 189 IPR035513 -
Pste4g01210 1198 FunFam Pectinesterase 673 829 - -
Pste4g01210 1198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 189 IPR035513 -
Pste4g01210 1198 ProSitePatterns Pectinesterase signature 2. 1027 1036 IPR033131 -
Pste4g01210 1198 SMART PMEI_2 672 824 IPR006501 GO:0004857
Pste4g01210 1198 SMART PMEI_2 36 186 IPR006501 GO:0004857
Pste4g01210 1198 PANTHER PECTINESTERASE 638 1183 - -
Pste4g01210 1198 NCBIfam pectinesterase inhibitor domain 24 187 IPR006501 GO:0004857
Pste4g01210 1198 NCBIfam pectinesterase inhibitor domain 672 828 IPR006501 GO:0004857
Pste4g01210 1198 Gene3D - 877 1192 IPR012334 -
Pste4g01210 1198 Gene3D - 218 540 IPR012334 -
Pste4g01210 1198 FunFam Pectinesterase 218 540 - -
Pste4g01210 1198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 676 828 IPR035513 -
Pste4g01210 1198 FunFam Pectinesterase 877 1193 - -
Pste4g01210 1198 CDD PMEI-like_3 679 830 - -
Pste4g01210 1198 ProSitePatterns Pectinesterase signature 2. 371 380 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01210 Pste-Chr4 8898340 8904403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01210 77 539 Carbohydrate Esterase AT3G05610 39.014 1.31e-108 354