Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01205 CATAAATTGGAGGTGCAGCTGTAGGGTTGTGCAAGAGGCGAAGCAACAATGGGGATCGATCTCAAGGCTGGAGGTAAGAGCAAAAAGACCAAAAGAACAGCACCCAAGTCCAATGATATCTATCTCAAGCTCTTGGTCAAGCTTTATCGCTTCCTTGTTCGGAGAACTGGCAGTGATTTCAATGCTGTTATACTCAAGCGCCTGTTCATGAGCAAGGTTAACAAGCCCCCACTATCTTTATCAAGGTTGATTAAGTATACAAAGGGGAAGGAAGATAAAATTGCTGTAGTTGTGGGGACTATTACAGATGATATTCGTGTTTATGAAGTTCCACCCTTGAAAGTTACAGCACTCAGGTTTACGGAGACTGCTCGTGCAAGAATTGAAAAGGCAGGTGGTGAATGCTTGACATTTGATCAGTTGGCTCTTAGAGCTCCTCTTGGACAGAACACGGTCCTTCTTAGAGGCCCAAAGAATGCTCGTGAAGCTGTGAAGCACTTTGGTCCTGCTCCTGGTGTACCACACAGCCATACCAAGCCTTATATTCGATCAAAGGGAAGGAAGTTTGAGATGGCCAGAGGAAGGAGGAACAGCCGAGGATTTAGGGTTTGATGTGATAAATAGTGCTCTATTCTCTGGTAGTATTACCTCTGAAATTCAAATTTTCCTTATATCTTAGACAGTTGAGGCAGTTTTTTTGTTATTTGTATTCTGATCATGATTTTCATTATGAATTTTTCATTCTCGTCTCCGTTATTCTCCGTTGAAGTGTTTTGTGAAGCTTTTACTCAGTTTTGAAGATAGAGAATGGATAATCGTTGGTTTTGTGGGCATGTTTGTGCTTTTACTGTATACTTGTCTGAGTAGAAGTGCATAATTAATGCTTTCTAGATTGAGCTTTCTGCCCAAGAAGCAAATTCTTTTAATAATTTATTTGTTAAAAGTTACTGAAAATTTTAAAATTACTGGACGTGTAAAAATTTCAGC 987 0.4002 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSDFNAVILKRLFMSKVNKPPLSLSRLIKYTKGKEDKIAVVVGTITDDIRVYEVPPLKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYIRSKGRKFEMARGRRNSRGFRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01205 187 FunFam 60S ribosomal protein L18 1 187 - -
Pste4g01205 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Pste4g01205 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Pste4g01205 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 187 IPR000039 GO:0003735|GO:0005840|GO:0006412
Pste4g01205 187 Gene3D - 1 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01205 Pste-Chr4 8869315 8872227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01205 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 77.957 5.81e-104 295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01205 4 8869315 8872227 Pste4g01205 4 8869315 8872227 ECH
Pste5g03056 5 23677851 23679952 Pste4g01205 4 8869315 8872227 PCT