Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01199 GGCAAATCCAAACCCTAGTTCTCCAGCACACTTCAACGGCGCTCCTCTCTGCACACACTGTGCTGTGTTCTTTGGACGTAGCTTAAGGTAGGCAATAGAAAGTGGAAAGAGAATGAGTCGAGGAGGTGCAACTGCTGCGAAGGGGAAGAAGAAGGGCGTGACATTCACCATTGACTGCGCAAAGCCAGTAGAGGACAAGATCATGGACATTGCGTCTCTCGAGAAGTTCCTTCAAGAGAAAATTAAGGTTGGTGGAAAGGCCGGTGCTCTTGGCGACATCGTCTCCGTCACACGCGAGAAGACCAAAATTATTGTTACTTCCGACAGCAACTTCTCCAAACGGTACCTCAAATGGTTGACTAAGAAGTATTTGAAGAAGCACAATGTACGTGACTGGCTCAGAGTGATTGCTTCTAACAAAGATAGAAGCATTTATGAACTGAGGTACTTCAACATTGCTGAGAATGAAGGAGAGGAAGAAGATTGATTATGTTACACTTTCGTTTTAGAACCTTGTTTATCCATTTTCTCGGTGCTAGCTTCTCCTTTGGTTGCTGCTTGTTTTACATTAGTTGCAATTTAACAGTTTTGTTTATTTAAGAGTTGGTGTACCATTTTTATTGAATTCAGAATAGAGTCACATATATGGTCAATTTTTCCTTTCATATCCATTCAGTTCCATTCCATTATTAAACAAGATGAATATCAAATCCTCAACTGCAGATTGTTTGCTCCACG 738 0.4173 MSRGGATAAKGKKKGVTFTIDCAKPVEDKIMDIASLEKFLQEKIKVGGKAGALGDIVSVTREKTKIIVTSDSNFSKRYLKWLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01199 124 FunFam 60S ribosomal protein L22-2 5 124 - -
Pste4g01199 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
Pste4g01199 124 PANTHER 60S RIBOSOMAL PROTEIN L22 2 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Pste4g01199 124 Gene3D - 5 124 IPR038526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01199 Pste-Chr4 8806730 8807816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01199 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 84.677 7.70e-67 196
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01199 4 8806730 8807816 Pste4g01199 4 8806730 8807816 ECH
Pste5g03069 5 23795634 23797474 Pste4g01199 4 8806730 8807816 ECH
Pste4g01199 4 8806730 8807816 Pste5g03069 5 23795634 23797474 ECH
Pste5g03069 5 23795634 23797474 Pste4g01199 4 8806730 8807816 PCT