Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01193 AAGAGAGCGGGGTTTGTGTTTTAAAAATTGAAAACTGATTAGGGCAGGAGTTTTGAAATTGCAGAGCAGATATGGCATCTGCGACGGGGCGAGAGTTGTCGAACCCTCCATCGGACGGCATCACGAACCTCCGATTCTCCAATCACAGCGATCATTTACTCGTTTCTTCCTGGGACAAGAGCGTGCGCTTGTATGACGCCAGCGCCAATGTCTTGAGAGGAGAGTTTATGCACGCCGGCCCCGTCCTCGATTGCTGCTTCCACGATGATTCCTCCGGCTTCAGTGTCGCCGCCGACAACACTGTTAGACGGCTTGTCTTCAGCTCTAATAAAGAGGATATTCTTGGAAGGCACGATGCACCTGTTCGTTGTGTTGAGTACTCCTATGCTGCAGGCCAATTGATCACTGGTAGTTGGGACAAAACCCTCAAATGTTGGGACCCTAGAGGCGCAAGTGGGCAGGACCGCACACTAGTTGGAACATATCCACAACCTGAGCGTGTCTACTCTCTATCACTCGTTGGACATCGTCTGGTTGTCGCAACAGCTGGAAGACATGTTAATATCTATGATTTGAGGAACATGTCTCAACCTGAGCAAAGGAGAGAATCTTCATTAAAATATCAAACTAGATGTGTTCGCTGTTACCCTAATGGAACAGGATATGCACTTAGTTCTGTTGAGGGCCGGGTTGCAATGGAATTCTTTGATCTCTCAGAGGCTAGCCAAGCAAAAAAATATGCTTTCAAGTGTCACAGAAAATCAGAAGCTGGAAGGGACATCGTCTATCCTGTAAATGCAATTGCATTCCACCCCATATATGGTACATTTGCCACTGGAGGTTGTGACGGGTATGTAAACGTATGGGATGGAAACAATAAGAAGAGATTATACCAGTACTCAAAGTATCCAACTAGCGTTGCAGCACTTTCGTTTAGCAGAGATGGACGACTGTTGGCTGTTGCATCGAGTTACACATTCGAAGAGGGACCTAAAAGCAACGAACAAGACGCTATATTCGTTCGTAGTGTAAACGAGATTGAGGTCAAGCCGAAACCCAAAGTTTATCCCAATCCTCCAGCGTGATTCTTGATGGCCATTTAGAAAGTAGTAGTTTCTTGTTTGTTTTTTTTTCCCCATTTATTGTTGAACTTCCTCCTTGTGATCGCCAAAAACTACCTTGTAAAATGTTGTGAAAACGCTAGCTAATTGTTGGATACGGGTTGCTTTCAGAAATAGCTTTACATGGTTTTTGTCTTTATTCCCCGTTTAAAGTAAATTGAAATTGATAAACACCCTTGAGTCAGCTCAAGCTGAAAAATATGAATTGTGAGTGCTGGATTGTTTTCTAA 1351 0.4434 MASATGRELSNPPSDGITNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHAGPVLDCCFHDDSSGFSVAADNTVRRLVFSSNKEDILGRHDAPVRCVEYSYAAGQLITGSWDKTLKCWDPRGASGQDRTLVGTYPQPERVYSLSLVGHRLVVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSVAALSFSRDGRLLAVASSYTFEEGPKSNEQDAIFVRSVNEIEVKPKPKVYPNPPA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01193 337 Gene3D - 3 331 IPR015943 GO:0005515
Pste4g01193 337 FunFam Mitotic checkpoint protein bub3, putative 2 330 - -
Pste4g01193 337 PRINTS G protein beta WD-40 repeat signature 253 267 IPR020472 -
Pste4g01193 337 PRINTS G protein beta WD-40 repeat signature 110 124 IPR020472 -
Pste4g01193 337 PRINTS G protein beta WD-40 repeat signature 29 43 IPR020472 -
Pste4g01193 337 SMART WD40_4 218 266 IPR001680 GO:0005515
Pste4g01193 337 SMART WD40_4 5 42 IPR001680 GO:0005515
Pste4g01193 337 SMART WD40_4 131 167 IPR001680 GO:0005515
Pste4g01193 337 SMART WD40_4 45 82 IPR001680 GO:0005515
Pste4g01193 337 SMART WD40_4 84 123 IPR001680 GO:0005515
Pste4g01193 337 SUPERFAMILY WD40 repeat-like 13 300 IPR036322 GO:0005515
Pste4g01193 337 PANTHER MRNA EXPORT FACTOR AND BUB3 7 323 - -
Pste4g01193 337 ProSiteProfiles Trp-Asp (WD) repeats profile. 241 275 IPR001680 GO:0005515
Pste4g01193 337 ProSiteProfiles Trp-Asp (WD) repeats profile. 91 123 IPR001680 GO:0005515
Pste4g01193 337 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 91 123 - -
Pste4g01193 337 Pfam WD domain, G-beta repeat 15 42 IPR001680 GO:0005515
Pste4g01193 337 Pfam WD domain, G-beta repeat 225 266 IPR001680 GO:0005515
Pste4g01193 337 Pfam WD domain, G-beta repeat 91 123 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01193 71 299 U-box Gene Family AT2G33340 24.464 4.32e-07 49.7