Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01186 ATGAATTTAGATCTACATTTTCAATTGACCTTTTCTTTCCGAGACCAGAGTGTTGCTTGGTTAAAGTGTAGTGGTTCAGCAACCTTGATGTATCTTGTGGCTGATTGCAGTGAAGTAAGTGGAGACAGAGAGGTGCAGAGAACAATGCTAGAGTTGCTTAATCAGCTTGATGGTTTTAGCAGTGATGACCGGATCAAGGTGATAGCAGCAACAAACCGTGCAGATATTCTTGACCCTGCCCTTATGCGTTCTGGTCGATTGGATCGTAAAATTGAGTTTCCACATCCAAGTGAAGAAGCAAGGGCTCGAATTCTACAGATCCATTCGAGAAAGATGAATGTTCACCCAGATGTCAACTTTGAAGAACTGGCACGGTCCACGGATGATTTCAATGGAGCACAACTGAAGGCCGTCTGTGTTGAGGCTGGCATGTTGGCTCTACGCCGTGATGCAACTGAGGTGAACCATGAGGACTTTAATGAAGGTATTATTCAAGTCCAAGCAAAGAAGAAAGCAAGCCTGAATTATTATGCATAGGCTGGATCGTGGAACAAGAACAAGCTATTTTTCAGTTTACAAACACCTCAAGCCATTGGAAAACCTAAGTTGATATTTGACATTTGTTAACTTCTTATTTTTGGCAATTTTTAATTGAATGGTAACTTACAGCATGCCAGAATCATCTTCTCACACAATCTGATAGTCGATTTCGTTGCAGTAATGGAAATTTGATCTGCTTGCTATGTTGAAAATTCCTGCGATACTCTATGATTAAACAAACTAGACTTGTGGAGACTGTCAGATTCGCTTATTTTTTATTGGC 823 0.407 MNLDLHFQLTFSFRDQSVAWLKCSGSATLMYLVADCSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01186 178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 161 IPR027417 -
Pste4g01186 178 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 38 171 - -
Pste4g01186 178 Gene3D - 30 96 IPR027417 -
Pste4g01186 178 Pfam AAA+ lid domain 117 161 IPR041569 -
Pste4g01186 178 Pfam ATPase family associated with various cellular activities (AAA) 41 94 IPR003959 GO:0005524|GO:0016887
Pste4g01186 178 ProSitePatterns AAA-protein family signature. 65 83 IPR003960 GO:0005524|GO:0016887
Pste4g01186 178 Gene3D - 97 171 - -
Pste4g01186 178 FunFam 26S protease regulatory subunit 6A 97 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01186 Pste-Chr4 8763066 8764900 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01186 47 167 Calmodulin-binding Proteins AT3G56690 38.211 1.41e-19 83.6