Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01161 CTGCCTTTCTGACAAAACTTCTTAAAAAGGCGTATAAGACAAAAGAATTAAGTCAAAGTGGAAGGAGGGAAAGACATTGCCAGTGTTGTGCTATGCTATGCTATGCATTAACACTAACAGTGGTGTTTGTAGAGTAGAATTGATTAGGATGAGAAGAGATAAGAGTGTATGAACAGGGAAGTAAAGAAGGACCAGTACAACCACAACTGCCAGGTTCAGGGGTTCCTTGGAGTAGCATTAAAGACACTGTTTCAGATCTTCCCTCACACATCACCAGCACCACCCAAATGACAATTCTTGGAAAACCAATGGAACAAAATGGAAGCAAACTACTTTTATAAGAGGAAAGCTGCATTGATGTCTTGATGACTTTTAGTTGGAAGAACAAAAAGAAATGGGTTGCGGTTCTGAGCATACTATCATCTTCATCATCACCCTCTTCATGCTCCTATCATCACAAAGCACCCACATTTTGACTCTGGCTGGTTCTCTATTCAATGTAGTGGGAAGCTTCCAAGTTCATGCCCTACCTGACAAGTATATCATTGAAGAGAATGAAGAAAAGCAGGTTAAGAAAATCTCAGGAATAGATGAGAATGAAGAGAAGCAAGCTTTTATAGTGGAAAAGTTTAGATCCTTGCTTGGACTCAAGAGCTTCCACATCAAAGTACCATCCAATGGTGATTTGGAGTTTCTCTCTCCCTCACCTTCTCCATCACCAATCATTGAAGAAACTCAGGCTCCAGCTCCTTCTCCTTCTCCACTTCCACACGTGCACCATCATTCCCATCATCCATCACATCATAAGAATCCACCACTCCACAAAACTCATCATGAAGATAGAGGCAGGGCTAAAAGAATACTAATAGCGGTTCTTGTATCTGCGGGAGTTGCTACATTGATTGGTGCTTGCGGGATATTCTTGCTGTGGAGGAAATTCTCAAATCACACAAAAAAACCCAAAAGGACAATGTCTCTATATAGCAAGAGCAAAGGAAGTGGAGTTGCTTATCAAAGTTCATCAAGTAAGGTGAGTTTAAACTCAGGACTAGATCTGTTTTATCTTAATGCTTTAGGCGAGGACATAGAACAACACTCTTGCAGCTTGAAAAAGACTTGCAGGGATGGTTTAGAATACGGTAATGTTAGCGGTTCTTCCTCTAAGGAAATTGCATCTGTTCATGAAGATGCGGAATCACTGGAAGGTGAGGCTGAATCTGATGGCGGCAACTCTTCTTCTGGGGATAAGATTATCCCTGAAGATTGCCATTCATCAGACAATGAAAGTTTTCACTCCTTTGTTGATGATTCACGCTCAAATAACAGACTTTCCAGTGCTTCAGCTGGTAGTCTAAGTGACACAAACTCTCTGTCCCGTCAAAATTCAAGTTCATTAGCAGACCAATATCCTAGTTCTCCACGTAATTCAAACTCAAATATAGAATCTCACCAATCATCAAATAGTGCAAAACATGAAGAGGAAGAGATTGAAACTACTGTCCAATGTCCAAAAACATTTGCTTCTCCTCCTCCTCCACCACCACCGCCACCTTTGCAAATGCCACTGTTTTCTTTGCATTCTCTCACCTCTTCATCTAGAATCTCCTCTCATTCTCCACTTTCTTTGACATCTAATAATTTATCATCTCCGGTAAATTCAGCCACTTTCTCAGGCTCAAATCAAAGTCCAGAAAAGGAGTTGCCTTCTCCACACGGACCTTACCCTACACAATCTCCTCCCAACATTCCCCCACCACCATGTCCACCTCCATTTCTTAAAGGCAACAGTAACAGTGCCAAAACTCCACCTCCTCCACCATCTCAACTCCCTCAATTTACCCCACTTGGTAAAGATGGTGCACCGTTGCCAAAACTCAAACCTCTTCACTGGGACAAAGTAAGAGCTGCACCAAATCGCACAATGGTTTGGGATAAGCTACGATCAAGCTCATTCGAGTTGGATGAGGAAATGATCGAGTCTCTTTTTGGTTACAATTTGCAAAGTTCAATTAAGAATGACGAAACAAAGAGTAAAACCCCGTCTCCAAGCAAGCATGTACTTGAGCCAAAACGCCTCCAGAACATAACAATACTCTCAAAAGCTCTGAATGCGACAGCCGAGCATGTCTGCGAGGCCTTAATGCAAGGGAAGGGGTTGTCTTTGGCGCAACTAGAGGCACTAGTGAAAATGGTACCCACCAAAGAGGAAGAGTCCAAGCTCTTCAATTATAAAGGTGACATCAATGAATTGGGGTCCGCCGAAAGGTTCGTGAGGGCGATGCTTGATGTGCCATTTTCCTTTCAAAGAGTAGAAGGCATGCTTTTCAGAGAGACATTTGACGATGAAGTAGTTCACCTCAGGAACTCATTTTCAATGCTCGAGGAAGCATGCAAGGAACTACGATCAAGCAGGCTCTTCTTGAAGTTACTAGAAGCAGTGCTCAAAACGGGAAACCGTATGAACGTTGGAACCATCAGAGGAGGAGCTAAAGCATTTAAGCTCGATGCCCTTCTCAAGCTTGCAGATGTTAAGGGAACTGATGGAAAAACCACGTTGCTCCATTTCGTTGTTCAGGAGATTGTTCGTTCGGAAGGAATAAGAGTTTCAGATAGCATTATGGGGAAAATCAGCCAGCGAAATAAGAACAGAACGGAGGAAGAGAAGGAAGAAGATTACAAAAGAATGGGGCTGGAACTTGTTTCTGGCCTCAGCACTGAGTTATACAATGTGAAAAAAACAGCCACGATTGATTTGGATGTTCTTGCAAGCTCTGTGTCAAACCTATCAGAAGGAATGAATAAGTTGCAGCATCTTGTTGAGAAGGAGTTGCATAAGGATGAGAGAAGCACGAACTTTGTGCAGTGTATGAAGTCATTCCTTAATTATGCTGATGGAAACTTGAAGGAGTTGCGAGGAGATGAAGATAGAGTGTTATCTCGTGTGAAAGAGATTACCGAATATTTTCATGGAGATGTGAGCAAAGAAGATGCAAACCCACTTAGGATATTTGTGATTGTTAGAGATTTTCTGGGGATGTTAGATAATGTGTGTAAAGAACTTAGAAGGTCTAAAGCTCCACGTAGCCCCAACCCTCTTGCTATGCTCCCATTAGATAGATCATAG 3124 0.4229 MGCGSEHTIIFIITLFMLLSSQSTHILTLAGSLFNVVGSFQVHALPDKYIIEENEEKQVKKISGIDENEEKQAFIVEKFRSLLGLKSFHIKVPSNGDLEFLSPSPSPSPIIEETQAPAPSPSPLPHVHHHSHHPSHHKNPPLHKTHHEDRGRAKRILIAVLVSAGVATLIGACGIFLLWRKFSNHTKKPKRTMSLYSKSKGSGVAYQSSSSKVSLNSGLDLFYLNALGEDIEQHSCSLKKTCRDGLEYGNVSGSSSKEIASVHEDAESLEGEAESDGGNSSSGDKIIPEDCHSSDNESFHSFVDDSRSNNRLSSASAGSLSDTNSLSRQNSSSLADQYPSSPRNSNSNIESHQSSNSAKHEEEEIETTVQCPKTFASPPPPPPPPPLQMPLFSLHSLTSSSRISSHSPLSLTSNNLSSPVNSATFSGSNQSPEKELPSPHGPYPTQSPPNIPPPPCPPPFLKGNSNSAKTPPPPPSQLPQFTPLGKDGAPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQSSIKNDETKSKTPSPSKHVLEPKRLQNITILSKALNATAEHVCEALMQGKGLSLAQLEALVKMVPTKEEESKLFNYKGDINELGSAERFVRAMLDVPFSFQRVEGMLFRETFDDEVVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGAKAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSIMGKISQRNKNRTEEEKEEDYKRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLSEGMNKLQHLVEKELHKDERSTNFVQCMKSFLNYADGNLKELRGDEDRVLSRVKEITEYFHGDVSKEDANPLRIFVIVRDFLGMLDNVCKELRRSKAPRSPNPLAMLPLDRS 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01161 909 MobiDBLite consensus disorder prediction 253 495 - -
Pste4g01161 909 ProSiteProfiles Formin homology-2 (FH2) domain profile. 484 908 IPR015425 -
Pste4g01161 909 Gene3D Formin, FH2 domain 506 898 IPR042201 -
Pste4g01161 909 MobiDBLite consensus disorder prediction 437 461 - -
Pste4g01161 909 MobiDBLite consensus disorder prediction 305 354 - -
Pste4g01161 909 MobiDBLite consensus disorder prediction 110 124 - -
Pste4g01161 909 Pfam Formin Homology 2 Domain 488 882 IPR015425 -
Pste4g01161 909 SMART it6_source 484 897 IPR015425 -
Pste4g01161 909 MobiDBLite consensus disorder prediction 288 304 - -
Pste4g01161 909 SUPERFAMILY Formin homology 2 domain (FH2 domain) 497 893 - -
Pste4g01161 909 PANTHER FORMIN-RELATED 408 896 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pste4g01161 909 MobiDBLite consensus disorder prediction 126 141 - -
Pste4g01161 909 MobiDBLite consensus disorder prediction 392 435 - -
Pste4g01161 909 MobiDBLite consensus disorder prediction 103 149 - -
Pste4g01161 909 MobiDBLite consensus disorder prediction 374 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01161 Pste-Chr4 8666028 8669889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01161 469 902 FH2 protein (formin) Gene Family AT3G05470 75.515 0.0 669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01161 4 8666028 8669889 Pste4g01161 4 8666028 8669889 ECH
Pste5g03094 5 24002552 24005319 Pste4g01161 4 8666028 8669889 PCT