Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01159 TTAAAATATCAATTGGATTGGGGAAGAATCGCAGACGCCTTCATCGAATTTGCCACCTGCCATCCATTCTCCTCTCCTTTTTCTCCACCACTCCTCACTCCTCACCCATTCCTCATTCGCAGTGTATGACGAGCGCTTCCGAGCTTTTCCACACCAGAAGGCATCGATTGGGACGAAATGCTCTCAATCTCGATCTAGGGCTCGATACGCAACTCCACGCCGCCGACTCTCTCCGCCGCCGCCGCCACCACCACCACCACAACGTCCGCCGCCTCCGTCACCCACCGGAGCTTTCATCTGGTAGAATTGATGGCAGGCGTCGGCGGTCTCTCTTCAGTGACAGCGTTGATTGGGAAGATAACGTTAGAAGTCCTCTTCCAGGGAGCAGCAATGAGAGACTACCCGTGGGTGTCGTTCTTGCACGGGCAAGACTCCTTCAGAGGTTGAGAGGGGAACCTCTTGTCGCAGACAGGCAATATGACAGGGATTCAGTGGGTGAGGATAGAGAAAGTGAATCATCGAATGAAGCTCCAACTGGGGACTCTCTGGTTACTGACTTGACTTCTCAAATCGGTAGGTCCCAGCTATTGCAAGAACTAAACAAAAAGCCTCCTGGACTTTCTCAGGAGGCCTTGGACTGTTTGCATCAAGAACTTTTTAGCAGCAGTGAGATATCATTGGAGTCTAGGGTACTACAAGATTGTAGTATATGCTTGGAATCCTTCACAGATGGAGATGAGCTGATACGTTTGCCATGTGATCATAAATTTCACTCTGTTTGCTTGGATCCTTGGATTCGCAGCTGTGGAGACTGTCCATACTGTCGAAGATGTATAGTTGTAAATACTCACTTAATCACAAAATGAGGATGAGTAACTTTCTAGATTGACCTTGTTTTGTTCCACGGTTGTATGAAAGGAAAAGAATGCTGTAATGGAGCTGGCTTTTTGTAACGATGATGTATCTTATCTTGAATTATATAGTTTTTTTTTTTCTTTTCCTAATGACAATGGGAAAGACATGTATAACTAAATAGGGTATTATAATGCGTGTTCTTATAAAATAACAGCACGTGAATAGTAGTTTTAATATTTATTTATATTCATTAGCATGAAAATTTCAATTATGACAATTGTTAAACACACTCTTTTGAATATAGTGTTTGACTGAAATCTCGATAATAA 1184 0.4367 MTSASELFHTRRHRLGRNALNLDLGLDTQLHAADSLRRRRHHHHHNVRRLRHPPELSSGRIDGRRRRSLFSDSVDWEDNVRSPLPGSSNERLPVGVVLARARLLQRLRGEPLVADRQYDRDSVGEDRESESSNEAPTGDSLVTDLTSQIGRSQLLQELNKKPPGLSQEALDCLHQELFSSSEISLESRVLQDCSICLESFTDGDELIRLPCDHKFHSVCLDPWIRSCGDCPYCRRCIVVNTHLITK 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01159 246 PANTHER SI:CH211-59O9.10 59 239 - -
Pste4g01159 246 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 238 IPR013083 -
Pste4g01159 246 CDD RING-H2_PA-TM-RING 192 234 - -
Pste4g01159 246 MobiDBLite consensus disorder prediction 115 133 - -
Pste4g01159 246 Pfam Ring finger domain 192 234 IPR001841 -
Pste4g01159 246 SUPERFAMILY RING/U-box 192 240 - -
Pste4g01159 246 MobiDBLite consensus disorder prediction 38 64 - -
Pste4g01159 246 SMART ring_2 193 233 IPR001841 -
Pste4g01159 246 ProSiteProfiles Zinc finger RING-type profile. 193 234 IPR001841 -
Pste4g01159 246 MobiDBLite consensus disorder prediction 115 141 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01159 1 238 C3H Transcription Factor Family AT1G49850 42.636 9.19e-47 154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01159 4 8656512 8658751 Pste4g01159 4 8656512 8658751 ECH