Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01151 ATCATGCTGCGTCTGTGCTGCCGCTCTTTCGATTGCTGCTTCCGTGGCCGCGCCGCCGACGGACTTCTCTGGCACACCGACTTGAAGCCTCACGCCTCCGGCGACTTCTCCATCGCCGTCGCCCAGGCCAATTACTGTCTCGAGGATCAGAGCCAAGTCTTCACTTCCCCCTCCGCCACTTACGTCGGCGTCTACGACGGCCACGGCGGCCCCGAAGCTTCTAGATTCGTCAACAAACGTCTCTTCCCTTATTTGCACAAATTTGCCACTGAACAAGGGGGTTTGTCTGTTGACGTGATAAAGAAGGCATTTAGTGCCACTGAGGAAGAATTCATTCGCCTAGTGAAGCTATCATTGCCCATCAGTCCCCAGATTGCTTCGGTGGGATCCTGTTGCCTCTTTGGTGCAATTTCTAATAATATTTTGTATGTTGCGAACCTCGGAGACTCCAGAGCTGTTCTTGGTAGGAGGGATACAAAGAGAAAGAACAGTCCAGTGGTGGCACAACGTCTGTCAACCGATCATAATGTAGCTGATGAGGAGGTGAGAAGAGAAGTTGAAGCTCTCCATCCTGATGACTCGCACATTGTAGTTTATAGCCGTGGAGTTTGGAGAATTAAGGGCATTATACAGGTGTCAAGATCTATTGGTGATGTATATTTGAAGAAACCAGATTTCTACCGAGACCCAGTTTTTCAGCGATTTGGAAATCCTATTCCTTTGAAGCGTCCTGTAATGACAGCTGAACCTTCAATCATTATTAGGGAGCTTGAGTCGCAGGATTTATTCTTGATATTTGCATCAGATGGCCTCTGGGAACAATTAAGCGATGAAACAGCAGTTCAGATAGTTTTCAAATATCCAAGAGCGGGCATTGCCAAGAGATTGGTGAGAGCTGCTCTTCAAGAAGCTGCAAGGAAGAGAGAGATGAGATACGATGATATAAAGAAAATTGACAAAGGAATAAGACGACACTTCCATGATGATATCACTGTGATTGTAATATATCTTGATAACCATGCAGGCTCCTCAAATGGTAGATTTAAGCAAAGTGCTGTTGGCTATACAACTGCTCCTGTTGATATTTTTTCCCTAAATGCGGATGAAGCAGAAAAAAGTATGCTTAGCACAAAAGAAAATAAAATTTATATTGATTGGTTGGTCATGATATTTATGCCCCTGAATTTTGGTGATGAATTACGGAGTATGAAAGCGTTGGGGACGTTTCACCAACTAAAAAGAATTACAGGCCTGGTGAGTGGATATACTTTTCCTAAGCACATTGGTGTCATGGTACGTGTATTGTTTCCAACCATGGAAATATGA 1326 0.4465 IMLRLCCRSFDCCFRGRAADGLLWHTDLKPHASGDFSIAVAQANYCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKRLFPYLHKFATEQGGLSVDVIKKAFSATEEEFIRLVKLSLPISPQIASVGSCCLFGAISNNILYVANLGDSRAVLGRRDTKRKNSPVVAQRLSTDHNVADEEVRREVEALHPDDSHIVVYSRGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQRFGNPIPLKRPVMTAEPSIIIRELESQDLFLIFASDGLWEQLSDETAVQIVFKYPRAGIAKRLVRAALQEAARKREMRYDDIKKIDKGIRRHFHDDITVIVIYLDNHAGSSNGRFKQSAVGYTTAPVDIFSLNADEAEKSMLSTKENKIYIDWLVMIFMPLNFGDELRSMKALGTFHQLKRITGLVSGYTFPKHIGVMVRVLFPTMEI 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01151 441 FunFam Probable protein phosphatase 2C 42 26 345 - -
Pste4g01151 441 SMART PP2C_4 29 335 IPR001932 -
Pste4g01151 441 Gene3D - 26 345 IPR036457 -
Pste4g01151 441 SUPERFAMILY PP2C-like 44 339 IPR036457 -
Pste4g01151 441 CDD PP2Cc 48 337 IPR001932 -
Pste4g01151 441 PANTHER PROTEIN PHOSPHATASE 34 335 IPR015655 GO:0004722|GO:0006470
Pste4g01151 441 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Pste4g01151 441 Pfam Protein phosphatase 2C 56 305 IPR001932 -
Pste4g01151 441 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01151 Pste-Chr4 8624584 8627405 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01151 20 344 PP2C-type Phosphatase Gene Family AT3G51370 57.658 2.10e-141 407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01151 4 8624584 8627405 Pste4g01151 4 8624584 8627405 ECH
Pste1g02173 1 7025002 7033736 Pste4g01151 4 8624584 8627405 PCT