Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01129 ATGGATCAGGTGGAGGAGCAAGATAGAGCGTTGCCGATTGCAAATGTGGGTCGAATCATGAAGCAAATTCTTCCCCCTAGTGCAAAGATTTCCAAAGAAGGGAAGCAACTAATGCAAGAGTGTGTGACAGAGTTCATAAGTTTTGTGACTGGTGAGGCTTCTGACAGGTGTCACAAGGAGAATCGCAAGACCGTTAATGGGGATGACATCTGTTGGGCTCTAAGTTCCTTAGGGTTTGACAACTATGCTGAAGCCATAGGAAGGTACTTGCATAAATACAGGCAAGCTGAAAGGGAGAAAATCACTCACAACAAAAACTATCAAGGATCAGCAACAAAAACTCTGAAGCAAACTCCAATCATCCATGCTCCACCTTCACCAGTACTAGTGTCTAGGGTTACTCACAAGGTTCAAATCCCTCCCACTGCAAATCAATCTGGATGA 444 0.4437 MDQVEEQDRALPIANVGRIMKQILPPSAKISKEGKQLMQECVTEFISFVTGEASDRCHKENRKTVNGDDICWALSSLGFDNYAEAIGRYLHKYRQAEREKITHNKNYQGSATKTLKQTPIIHAPPSPVLVSRVTHKVQIPPTANQSG 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01129 147 ProSitePatterns NF-YB/HAP3 subunit signature. 41 57 IPR003956 GO:0005634|GO:0006355|GO:0043565
Pste4g01129 147 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 10 74 IPR003958 -
Pste4g01129 147 SUPERFAMILY Histone-fold 7 112 IPR009072 GO:0046982
Pste4g01129 147 PRINTS CCAAT-binding transcription factor subunit A signature 76 94 - -
Pste4g01129 147 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
Pste4g01129 147 PRINTS CCAAT-binding transcription factor subunit A signature 38 56 - -
Pste4g01129 147 FunFam Nuclear transcription factor Y subunit B-6 1 115 - -
Pste4g01129 147 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 3 111 IPR027113 GO:0001228|GO:0006355|GO:0016602
Pste4g01129 147 Gene3D Histone, subunit A 1 120 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01129 Pste-Chr4 8453024 8453467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01129 6 113 CCAAT-HAP3 Transcription Factor Family AT1G09030 71.296 1.60e-57 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pste4g01129 CBFD_NFYB_HMF 3.3e-25 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01129 4 8453024 8453467 Pste4g01129 4 8453024 8453467 ECH