Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01128 AAAGGGAACGCTCACGAAACTCAACTCTCTCTCTTTCTCTCTCTCACCCTCACCCTCTTCGCTCGCAACCCCATTTCAGATCGACCCTTTCTTCTTCCTCGCACTCCCTTTCCCATTCGCTGCGGAGACTACTGTGTTAGTCGCACCCACAACACTCATATTCAGACTATAGTGGTGACTGCTGTGCGATCGATGATTAGTCCAACTGGAGAATTGACAAACCATACTGAGCGGATGGGAACTGAACAGTGTGATTTGTCTGAAAAAACACATATAGGCTCTGAATGTTTAGACAAGGACCAAATAGAGATTGATACTGTGTTAACCAGTTCAGTTATTGAGGAAAAATCAAATCAAATTTCTGCCGATCTGATGGAGAATTCTGTTACTCTACTTCCAGCACTGCCTCAAAATGACTTAGAAAAGAATTGCCAGACTGTAGAAGGTCCACGCCTTCTACAAAGTACTATTGAACAAGTTTCTGTTAATTTATCTAATGATACAATAGAAAAGCAATACCAACCACTGTCTGAAAATGTTCAAAATGAACCTGTAGAATCTGTTCCTGCTTCTGTTGTTGATGGCCAAATGCAATCCAGTCCTGCTGAAGGGAACAAGAGTTCTGTGCATGAATTGTTGGATCCGACTTCTGGAGATGTTGTGAACAGTATTAATGCCAAAGCCTCAGAAAGAATGTCTAATAGCCCAACTAATTCACAATTGAGGCGCAAGGGTAAAAGAAACTCAAAATTATTGAAGAAGTATATGCTACGATCAATAGGAAGCAGCGATAGAGCTTTGCGGTCAAGAACTAGAGAAAAACCAAAGGAACCTGAACCAAATAGTAATTTGGTTGATGGTAACAGTGATGGAGTGAAGCAGAAAAGTGTGAGGAAGAAGAAAAAGAGAAGAGAGGAGGGAATTACTGATCAATATTCTAGAATCAAATCTCACTTAAGATATTTATTAAACCGAATAAGATATGAGAAAAGCTTAATTGATGCTTATTCAGGCGAGGGCTGGAAAGGATACAGTATGGAAAAATTAAAGCCGGAGAAGGAGCTTCAGCGGGCTAAGTCTGAAATTCTTCGACGCAAATTGAAAATTAGGGATCTATTTCGAAATTTGGATTCATTGTGTGCTGAGGGAAAGCTTCCTGAATCTTTGTTTGATTCTGAGGGAGAGATTGACAGTGAGGATATATTCTGTGCAAAATGCCAGTCCAAAGAGTTGACCACTGATAATGATATAATTCTCTGTGATGGTGTTTGTGACCGTGGATTTCATCAGCTCTGTTTGAATCCTCCGTTGTTAACTGAAGACATTCCACCTGGCGATGAGGGTTGGTTATGCCCAGGATGTGATTGCAAAGATGACTGCATGGACCTTGTTAACGAATCCTTTGGAATGAGTCTCTCTCTTGGTGACTCCTGGGAGAGGGTCTTTCCTGAAGCAGCAACTGCTGGAAATAATATGGACAATAACATGGGACTTCCTTCTGATGATTCTGAAGATGATGATTATAATCCTAATGGTCCTGAGGATGTGGAAGTTGAAGGAGATGAGTCAAGTTCTGATGAATCCGAGTATGCTTCTGCTTCTGAGAAATTGGAGGGTTCCCATGAGGATCAATATTTGGGCCTTCCATCTGAAGATTCCGATGATGGTGATTATGATCCTAATGCTCCAGACGTTGACCATAAAGTCAATGAACAAAGTTCAAGCTCTGATTTCACGTCTGACTCCGAGGATCTTGCAGCTGCAATTGAGGATAACACGTCTCCTGGACAGGATGGAGACATTAGATCTGCATCGTTGGATGATATTAACTACTTGAAAAGTTCTAGCAAACAAAAGTGCAAAGCTGGTAAGAAGCTATCTATGTCTGATGAACTGTCATCTTTACTAGAGCCAGATTCTGGCCAAGAGGGTTCTGCTCCTGTTTCTGGGAAAAGACATGTGGAAAGGTTGGACTACAAAAAACTGTATGAGGAGACATACCACAGTGATACCAGCGATGATGAAGATTGGGCTTCCACTGCTGCTCCAAGTAGAAAAAAGAAACTCACTGGCAATGTGACTCCAGTGTCACCAAATGGAAATGCTTCAAATAATTCTGTACATACTCCTAAGAGGAATGCCCATCAGATCAAAGTTGAAAATACGAATAATTCACCCACTAAATCAGCCGATGGCTGTGTGAAATATGGTTCCAGGGATAAAAAGTCTAGATCTTCGGCATACAAAAAACTAGGAGAAGCCGTAGTTCAGTATCAGTACACCTACAGCTTGCATAGCAGCTTATCTGGTACTGCTATACATAGACTTCACAAATCTTTTAAGGAAAATCAGTATCCAGACAGAACCACAAAAGAAAGCTTGGCACAGGAACTTGGACTTACTTATCAACAGGTTACCAAATGGTTCGACAATACACGTTGGAGCTTCCGACATTCATCACAAACCAATTCAGGTAGAAATGCTTCACAGCAAGCTAGCGATGGCAGAGCTGAAAATGAGGGGAAGCAGGAATGTGAATTGAAGTCCCCGGTGATCAGAGGAGAAAGATCGAAAACTCCAAGCTCGAGAAAAAGAAAACATTTGTCAGAACCTCAAGCATCTGTAACACAGCTGGATATCAATGGCTCAGCAACAAGTTCACCCAATTCTCATCAAACGCAAGTAGGCAATAAAATGAAGACTAGGAAAAGGAAATGATACATTATTGATAAGTCAAATTTAACCTTTTCCTAAGGCTTCGAATTAAAGTATCCATCTTTTTGTGAGATTGAGATCCCATGAGATGATCAGTTCGGATCTCGATGGATTTGTTTCCATTCAGGAAGGTAATCATGAAATGTGTGCCAGTGTTTGTAATTTTCAAAATAGCTTTCCAGGCATTGATCCCTGGAGAGTTTGTTTTAGTGTTGCCCCTCATGCAAACACTAAAAATAGTCAGTCATTAGCTTTAAATATTAGATTTTTTTAAAAATTTTTTACAGACCCCATTCCTTGTTTCAAATGATGTTTTTTCCTCCTCTTAGGGGGGTTTACTAACAGTACAAAAAAGAAAAAGCGATGAAAATAGGGGAACAATTTATATTTGTACACCTCAGGATTCAATGTCATATGTCATTACTGTATTAACCTGCAGACGACCTTTGTAAATATAGCGGCTCATGTGTCTGACTGTTCACAAATCACAACATATGTATCGGGCTTTCATTTTGTAATCGTATGTAGTTTAACAGTCAAGGTGGTTTGAGTAAGAAGGGGATGGGTGCATCAGCATCACATATTCCAATTGCTGCATGCATATTATAATGCTGTGTATCTATTTTACCTGTCCAACAACCTTCTGAGAACAGCAAGC 3373 0.4032 KGNAHETQLSLFLSLTLTLFARNPISDRPFLLPRTPFPIRCGDYCVSRTHNTHIQTIVVTAVRSMISPTGELTNHTERMGTEQCDLSEKTHIGSECLDKDQIEIDTVLTSSVIEEKSNQISADLMENSVTLLPALPQNDLEKNCQTVEGPRLLQSTIEQVSVNLSNDTIEKQYQPLSENVQNEPVESVPASVVDGQMQSSPAEGNKSSVHELLDPTSGDVVNSINAKASERMSNSPTNSQLRRKGKRNSKLLKKYMLRSIGSSDRALRSRTREKPKEPEPNSNLVDGNSDGVKQKSVRKKKKRREEGITDQYSRIKSHLRYLLNRIRYEKSLIDAYSGEGWKGYSMEKLKPEKELQRAKSEILRRKLKIRDLFRNLDSLCAEGKLPESLFDSEGEIDSEDIFCAKCQSKELTTDNDIILCDGVCDRGFHQLCLNPPLLTEDIPPGDEGWLCPGCDCKDDCMDLVNESFGMSLSLGDSWERVFPEAATAGNNMDNNMGLPSDDSEDDDYNPNGPEDVEVEGDESSSDESEYASASEKLEGSHEDQYLGLPSEDSDDGDYDPNAPDVDHKVNEQSSSSDFTSDSEDLAAAIEDNTSPGQDGDIRSASLDDINYLKSSSKQKCKAGKKLSMSDELSSLLEPDSGQEGSAPVSGKRHVERLDYKKLYEETYHSDTSDDEDWASTAAPSRKKKLTGNVTPVSPNGNASNNSVHTPKRNAHQIKVENTNNSPTKSADGCVKYGSRDKKSRSSAYKKLGEAVVQYQYTYSLHSSLSGTAIHRLHKSFKENQYPDRTTKESLAQELGLTYQQVTKWFDNTRWSFRHSSQTNSGRNASQQASDGRAENEGKQECELKSPVIRGERSKTPSSRKRKHLSEPQASVTQLDINGSATSSPNSHQTQVGNKMKTRKRK 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01128 905 MobiDBLite consensus disorder prediction 174 242 - -
Pste4g01128 905 Gene3D - 765 834 - -
Pste4g01128 905 SMART HOX_1 761 823 IPR001356 GO:0003677
Pste4g01128 905 MobiDBLite consensus disorder prediction 871 896 - -
Pste4g01128 905 SMART PHD_3 402 455 IPR001965 -
Pste4g01128 905 ProSiteProfiles 'Homeobox' domain profile. 759 819 IPR001356 GO:0003677
Pste4g01128 905 Pfam Homeodomain 769 815 IPR001356 GO:0003677
Pste4g01128 905 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 396 459 IPR013083 -
Pste4g01128 905 Pfam PHD-finger 402 457 IPR019787 -
Pste4g01128 905 MobiDBLite consensus disorder prediction 486 746 - -
Pste4g01128 905 MobiDBLite consensus disorder prediction 649 682 - -
Pste4g01128 905 MobiDBLite consensus disorder prediction 499 528 - -
Pste4g01128 905 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 196 879 - -
Pste4g01128 905 MobiDBLite consensus disorder prediction 817 905 - -
Pste4g01128 905 MobiDBLite consensus disorder prediction 529 548 - -
Pste4g01128 905 MobiDBLite consensus disorder prediction 837 853 - -
Pste4g01128 905 ProSiteProfiles Zinc finger PHD-type profile. 400 457 IPR019787 -
Pste4g01128 905 MobiDBLite consensus disorder prediction 685 731 - -
Pste4g01128 905 MobiDBLite consensus disorder prediction 817 836 - -
Pste4g01128 905 CDD PHD_PRHA_like 402 454 IPR045876 -
Pste4g01128 905 FunFam Homeobox protein HAT3.1 383 461 - -
Pste4g01128 905 CDD homeodomain 766 820 IPR001356 GO:0003677
Pste4g01128 905 MobiDBLite consensus disorder prediction 265 280 - -
Pste4g01128 905 SUPERFAMILY FYVE/PHD zinc finger 392 460 IPR011011 -
Pste4g01128 905 ProSitePatterns Zinc finger PHD-type signature. 403 454 IPR019786 -
Pste4g01128 905 MobiDBLite consensus disorder prediction 174 308 - -
Pste4g01128 905 SUPERFAMILY Homeodomain-like 768 821 IPR009057 -
Pste4g01128 905 MobiDBLite consensus disorder prediction 567 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01128 Pste-Chr4 8449368 8460203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01128 195 816 Homeobox Transcription Factor Family AT3G19510 41.902 2.69e-126 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Pste4g01128 PHD 5.6e-11 CL0390
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01128 4 8449368 8460203 Pste4g01128 4 8449368 8460203 ECH