Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01124 ATGAACAGAGAGAAGGAAAACTATGGAACCCAAGATGACAAGCCCAAAGAGTGGTTGAATCTGAGCTTAGGAGGCACTCCACTCTCAACAGGTGGAGACCCTAATTCACAGTCAAGACCAGCCACTGCCAAAGTTTTTTCATGCAACTTCTGCATGAGGAAGTTCTTTAGTTCACAAGCATTAGGAGGTCATCAAAACGCCCACAAGAGGGAAAGGGGAGCTGCCAGAAGATACCAATCTCAGAGATCGATGGCAATAATGGGTTTCTCCATCAACACACCTCTGTTTCGATCACTTGGTGTCCAACCCCATTCACTGGTGCCCAAGCCATGCAGAGGTGGTACCATGGTGGCACCGAGCTTTCATGATGCATATGCAAAACTTGGGATGGCATGGACATCTTTCTCATCTGAGGATCAAACGGATTTGGTGTGGCCAGGCAGCTTTCGCTTGGTTCCACAACAGCCCCAACCACCACAGGAGCCACTCAAGCTTGATTTAGACCTCAAACTATGA 516 0.4826 MNREKENYGTQDDKPKEWLNLSLGGTPLSTGGDPNSQSRPATAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQRSMAIMGFSINTPLFRSLGVQPHSLVPKPCRGGTMVAPSFHDAYAKLGMAWTSFSSEDQTDLVWPGSFRLVPQQPQPPQEPLKLDLDLKL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01124 171 ProSiteProfiles Zinc finger C2H2 type domain profile. 46 73 IPR013087 -
Pste4g01124 171 MobiDBLite consensus disorder prediction 23 39 - -
Pste4g01124 171 Gene3D Classic Zinc Finger 34 89 - -
Pste4g01124 171 SUPERFAMILY beta-beta-alpha zinc fingers 43 72 IPR036236 -
Pste4g01124 171 MobiDBLite consensus disorder prediction 1 39 - -
Pste4g01124 171 ProSitePatterns Zinc finger C2H2 type domain signature. 48 68 IPR013087 -
Pste4g01124 171 PANTHER ZINC FINGER PROTEIN 4-LIKE 3 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01124 Pste-Chr4 8436211 8436726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01124 33 159 C2H2 Transcription Factor Family AT1G24625 40.441 1.30e-20 82.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01124 4 8436211 8436726 Pste4g01124 4 8436211 8436726 ECH