Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01110 ATGGCGGCCAAAGAGGAGTTTGAAGTGGACCATCTCTCCACCCCCACAGGGACTAGTTTCTCTCAGTTACTATTCGGAGATGACAATGATGATCATCCAAGTGCATTGGTGGACCAGTCTTACAATTACAACTACATTACCCGTTCACCTCTTTTCTCCATCCATAAGGCACCCCAAATGCTTTGTTTTGCCAACCAACCTAACCTTTTACTTCCTCACAATTCTGTCATCACTTCTAGTGACTCCTCTTCTGCTTCTTCCTGCAACCACACCTCCACCGCCTTCAATTCCTTACCCAACTCCAATACTTGTCACAAAAAGCGAAATGTCTCGGGACAAGAAGCAGTCACCAAGGTAGCTGTTGGAGCCCACCGACAACCTAAGAAGACCAAAGCAGATAATCCCACTTCAACCGGACATGCAAAGAGGAAGGAGAAGCTCGGGGAACGAATTGCAGCGTTACAACAGCTTGTTTCTCCCTTTGGCAAGACAGATACAGCATCAGTGCTTCATGAGGCCATGGGTTATATACGATTTCTTCATGACCAAGTTCAGGTCCTGTGCTCTCCTTACTTGCAAAGTTTTCCTTCTTCACACCATCAACATCAGCATGGCCCGCTTGATGGGGACAATACTGCAGCATTACCTTACATGAAAATGCTGACCCGGGGGGACGGAGGTAACAATGAAGGGGAAGTGAGCAAGAACAAAGATTTGAGGAGTAGGGGCCTTTGCTTGATTCCTGTGGGATGCACCGTACACGTGGCAGGTAGCAATGGTGCTGATTTTTGGTCACCTGGTGCAATAGGGAACAATGTTTCACCATCAGTGAAACAATGAATCCTTTTCAAAATTTGTAGCCTTTTGGGAAATGGGTTCCTATGTCTGCCCAAATTGGACTTGTACTCAATATGACGCTTATCTGGAGATGGATGGGTGAGGAGGTAAACTAGAAGAAATGGCAAAGCGTGATAACAATTAACTAGAGTGGTTCAAAGTTCACACATGGGGTACAAACCACAGGTCATGATTTTGTCCTTAATTATGTAACATCTGTTTTCGGGCGTCCTTTTCTCAGGACATCTATATCTATATATCAATATTCTATACTAGGAAGGAAGGAAATATTTTATGTAGGATTTAGGGATGTGTGGTCTTGAACCCTGAGCTAGGAGTCTAGGATTCCATATATTTTTATTATATATTTTGTCTCTGTAAATTTCTCTAGGCAAGGCAATTAATGAAGTTATC 1251 0.4373 MAAKEEFEVDHLSTPTGTSFSQLLFGDDNDDHPSALVDQSYNYNYITRSPLFSIHKAPQMLCFANQPNLLLPHNSVITSSDSSSASSCNHTSTAFNSLPNSNTCHKKRNVSGQEAVTKVAVGAHRQPKKTKADNPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQSFPSSHHQHQHGPLDGDNTAALPYMKMLTRGDGGNNEGEVSKNKDLRSRGLCLIPVGCTVHVAGSNGADFWSPGAIGNNVSPSVKQ 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01110 279 FunFam Transcription factor bHLH113 124 194 - -
Pste4g01110 279 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 131 180 IPR011598 GO:0046983
Pste4g01110 279 Gene3D - 141 194 IPR036638 GO:0046983
Pste4g01110 279 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 193 IPR036638 GO:0046983
Pste4g01110 279 CDD bHLH_AtbHLH_like 142 187 IPR045239 -
Pste4g01110 279 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 49 254 - -
Pste4g01110 279 MobiDBLite consensus disorder prediction 126 144 - -
Pste4g01110 279 MobiDBLite consensus disorder prediction 123 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01110 Pste-Chr4 8384707 8386787 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01110 122 266 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 46.939 7.43e-33 122
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01110 4 8384707 8386787 Pste4g01110 4 8384707 8386787 ECH