Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01109 ATACAACGAAAAATTTGGATCCCCAATGCGGCGCAGAAGGTGGAGCGTTGATAGGAGGCATCCAGTGACGTGTACGCTACCCTACGCCCGACCTAAGAGCTCAATGGCACCAACAAGGAAATCTAGAAGTGTGAATAAGAGGATTTCAAGTTCAAATGATAATTCTCCTGAGAAAGAAGGAGTTAATTCAAATAAAAACAAGCAACGGAAAAAAAAGTTGGCTGATAAATTGGGATCTCAGTGGAACAAGGAGGAACTAGAACGATTTTATGAAGCATATAGGAAGTATGGGAAAGACTGGAAGAAGGTGGCTGCTGTTGTACGTAATAGATCTACTGAAATGGTAGAAGCTCTTTACAATATGAATCGGGCATACCTCTCTCTGCCAGAGGGGACGGCTTCTGTTGTTGGTCTCATAGCAATGATGACAGATCACTACAATGTGCTGGAAGGGAGTGATAGTGAAAGGGAGAGCAATGATGCACCAAGGTGTCAAAAACCTGCAAAACGGAAGCGTGAAAAAGTTCAGCTTAGTGTCTCTAAAGATCAGTCTTATTCAATTGCTTCCAGTGATGATTGCCTCTCTCTTTTGAAGAAGAGACGATTTGATGGTATTCAGCTGCAGCCTCATGCAGTTGGTAAAAGGACTCCTCGCATCCCAGTTTCCTATTCTTATAAGAAAGATGATACAGAAAATTATGTTTCACCTTATAGAAGAAGCCTCAAGTCAGCTGTTGATGCTAATGATGATGAAGTTGCACATGTTGTAGCTTTGACATTAACTGAGGCTGCACAAAGAGTTGGCTCTCCCCAAGTTTCTCAAACACCATGTAGAAGAGTAAAGCAAAAATCTTCTCCCATCCAGAGCTGGGAAAGAAAGCACCAAATGTCAGAGACAGCTCGTGCCAAGTTTCATGATGTTTCTGTGGATGAAGAGTTCTTGGAAGATAGTATAGGGGCCAGAGGAGCTGAAAATGGAGAATATGCAAGAGATAATAGTTCATTGATGGATAGGGAAGGCATAGGCGCTGTTGAAGTTCTTCAGAAAGGGGGGAAATTTTATAGAAAGAGAGAAAGAATTAGAAATGTTGGAAATCATCAGCTTGATGATGGTGGGGAAGCATGTAGTGGGACTGAAGAAGGACTTAGTTTTAGTTCACTAAAGGAAAAGGTTGATGTTGAGGTTACTAATGAAAAACTTGAAAAATTCTCTCCAAAAATTCAGAGGAAAAGAAACAAGAAACTCTTCTTTGGAGATGCAATCCCTGCCTTGGATGCGTTGCAAACTTTGGCAGATCTGTCTCTAATGATGCCAATATCTACAATAGAATCTGATAAAGATAATAAATCGGCTTTACCTGAAGTTACATCAACAAGCCATAAGAGACCTAAACTTAAACACAGCATGGTCCCTGAAATTGAAATTTCAACGTCCAGAAAGTCTAAAATTGGAAAGGAAACAACAAAGGGTGCTAGCACTCTCTCTGAATCAAAAGAGCAAATTTCTTTTGCTGATACAACATGGAAAAGGAAGGTAAAATCTATGGTGTCAAAGGTAGCAACTGCAAAGCTTGATCCTTATCCAAGTGGTCCCTCAAAAGATGAGGTAGCAACTGCAAAGCTTGATCCTTATCCAAGTGGTCCCTCAAAAGATGAGGTCTTAGATTATGAGAACAAACCAGTGGTTAAAGGAAAACACACTGATCAGGTTTTTACCCTACCAAAGCAATTGAAGACGGTTAAATCATCAGAGAGTTCCTTCTGTAGTGATAAAAAAGATTTGACTATATCAACTGCAGAAGTTCTACTTTCAAATGAAATTAGTTTACCAACTAAACGAAGTAGAAGGAAATTGATTTTACAGAGAACGTCCTTGCCTAAGGAAAAGTCTTCTGATTACATATTGAAAACTCAACCTAACAAGTACTCTATCCTAAACGAAAAGCTTTCTAGTTGCTTGTCATCTAATATGGTTCGCAGATGGTTTATATTTGAATGGTTTTATAGTGCAATTGATTATCCATGGTTTGCCAAAAGGGAATTCATGGACTCCCTTGGCAAACCCCGCAGGTTTTCTGAACACTTTCTACGTGAAGAAAGGCAAAAACTTGAACAGTATCGGGAATCAGTGAGGAAACATTACACTGAACTGCGGACTGGTGTTAGGGATGGACTTCCAACGGATTTAGCTAAACCATTATATGTTGGACAACGAGTAATTGCTCTTCATCCAAAAACAAGAGAGATTCATGATGGTAGTGTGCTTACCGTTGACTATGACAAGTGCAGGATTCAGTTTGACCGTCCTGAATTAGGTGTTGAATTTGTAATGGACATTGATTGCATGCCTTTGAATCCATTAGATAATATGCCTGAAGCTCTGAGGAGGCATGCAAAGGTTTCTACCGTCGATAACCTCTGTGCACAAGCAAGTTGTGCTCAACCTTGCAAAGTGACACACCATCAAGCTAAGGAAGCTGATATACATGCACTTTCTGAACTAAAGCGTGCTCTAGATAAAAAGGAGACATTGTTGATGGAGCTTCAAAGTGCAAATAGTGATGTATTAGAAAACCAAAATGGCTTAGAATGCTTTAAAGATTCTGTGATTTTCAAGAAGCATTACGCCACGGTTTCTGATGCTATGCTGCAACTGAGGCAACGTAATACTTACAGAGGAAACTCTCTGCCACCATGGATGAAGCCACAAGCAAATTTCAATGTTCATGATGATCTTCCCAATATGTTGGATAGTTCTCTAACACAAGAATTAGGGTCAACTGTTGTTCAAACTATTAAAGGATCCAGGTTAAGGGCACATGGAATGGTAGATGCTGCATTTCAGGCATTGTCTTTGACAAAGGAAGGTGAAGATGCTTTTATGAAGATCGGGCAAGTATTGGATTCTATTAATCATCAGCAGTTGGCCTCCAAGTCTAGGTTACCTGTGATCAGGTCTCAAGAGCAAGGGAATGCAAATGGCAGTTTTTATCATCTTAATCATTCAACTTGCTGTCTATCAGAGCCTGTAATTAATGATCCATCTGGTCCAAAACTACATAATTATTCTCACAAAATTGATACTGAACTTCCATCAGATCTTATCACTTCATGTGTTGCTACATTAATCATGATTCAGACTTGTACTGAACGGCAATATCCTCCAGCTGATGTAGCCCAGATATTAGATTCTGCCGTTACCAGCCTGCATCCATGCTGCCCTCAAAACCTTCCTATTTATAGAGAAATTCAAATGTGCATGGGAAGAATCAAAACCCAGATTTTAGCTCTCATCCCTACTTGACTTGTATCTTTTTCTGCAGATCTCTGATGTAGCTGCTGTACATATGATGCTGAACTATTATTAGTTCAGATCACATACGGGCTAGGAGCCCACCTTGTAATGTCGTTTTATTGAGGTACAATAATTTCTTTTACTCCACACCAATAGGGTCAAACGGTGATAATAGAAATAATGTAACTCACTACCATGTTCTTTTAATCTTTGGTGTCAAATGGTGGTACTTAATAAAAATTATTCAATAAAAAATGAGTATTTGATGTTTTCAAAATCCAAAAATTATTATATAATCTTT 3596 0.3918 MRRRRWSVDRRHPVTCTLPYARPKSSMAPTRKSRSVNKRISSSNDNSPEKEGVNSNKNKQRKKKLADKLGSQWNKEELERFYEAYRKYGKDWKKVAAVVRNRSTEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEGSDSERESNDAPRCQKPAKRKREKVQLSVSKDQSYSIASSDDCLSLLKKRRFDGIQLQPHAVGKRTPRIPVSYSYKKDDTENYVSPYRRSLKSAVDANDDEVAHVVALTLTEAAQRVGSPQVSQTPCRRVKQKSSPIQSWERKHQMSETARAKFHDVSVDEEFLEDSIGARGAENGEYARDNSSLMDREGIGAVEVLQKGGKFYRKRERIRNVGNHQLDDGGEACSGTEEGLSFSSLKEKVDVEVTNEKLEKFSPKIQRKRNKKLFFGDAIPALDALQTLADLSLMMPISTIESDKDNKSALPEVTSTSHKRPKLKHSMVPEIEISTSRKSKIGKETTKGASTLSESKEQISFADTTWKRKVKSMVSKVATAKLDPYPSGPSKDEVATAKLDPYPSGPSKDEVLDYENKPVVKGKHTDQVFTLPKQLKTVKSSESSFCSDKKDLTISTAEVLLSNEISLPTKRSRRKLILQRTSLPKEKSSDYILKTQPNKYSILNEKLSSCLSSNMVRRWFIFEWFYSAIDYPWFAKREFMDSLGKPRRFSEHFLREERQKLEQYRESVRKHYTELRTGVRDGLPTDLAKPLYVGQRVIALHPKTREIHDGSVLTVDYDKCRIQFDRPELGVEFVMDIDCMPLNPLDNMPEALRRHAKVSTVDNLCAQASCAQPCKVTHHQAKEADIHALSELKRALDKKETLLMELQSANSDVLENQNGLECFKDSVIFKKHYATVSDAMLQLRQRNTYRGNSLPPWMKPQANFNVHDDLPNMLDSSLTQELGSTVVQTIKGSRLRAHGMVDAAFQALSLTKEGEDAFMKIGQVLDSINHQQLASKSRLPVIRSQEQGNANGSFYHLNHSTCCLSEPVINDPSGPKLHNYSHKIDTELPSDLITSCVATLIMIQTCTERQYPPADVAQILDSAVTSLHPCCPQNLPIYREIQMCMGRIKTQILALIPT 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01109 1092 MobiDBLite consensus disorder prediction 28 51 - -
Pste4g01109 1092 Coils Coil 688 708 - -
Pste4g01109 1092 SUPERFAMILY Homeodomain-like 68 116 IPR009057 -
Pste4g01109 1092 Pfam Myb-like DNA-binding domain 71 108 IPR001005 -
Pste4g01109 1092 FunFam Protein ALWAYS EARLY 3 isoform A 29 125 - -
Pste4g01109 1092 PANTHER LIN-9 27 1092 IPR010561 GO:0006351|GO:0017053
Pste4g01109 1092 Gene3D - 21 125 - -
Pste4g01109 1092 MobiDBLite consensus disorder prediction 19 68 - -
Pste4g01109 1092 CDD SANT 73 107 IPR001005 -
Pste4g01109 1092 ProSiteProfiles SANT domain profile. 68 105 IPR017884 -
Pste4g01109 1092 MobiDBLite consensus disorder prediction 261 285 - -
Pste4g01109 1092 MobiDBLite consensus disorder prediction 142 167 - -
Pste4g01109 1092 Coils Coil 823 846 - -
Pste4g01109 1092 MobiDBLite consensus disorder prediction 515 545 - -
Pste4g01109 1092 Pfam DIRP 676 736 IPR033471 -
Pste4g01109 1092 SMART sant 69 117 IPR001005 -
Pste4g01109 1092 MobiDBLite consensus disorder prediction 52 68 - -
Pste4g01109 1092 MobiDBLite consensus disorder prediction 261 286 - -
Pste4g01109 1092 SMART DIRP_2 659 737 IPR033471 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01109 Pste-Chr4 8372125 8386987 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste4g01109 DIRP 2e-16 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01109 4 8372125 8386987 Pste4g01109 4 8372125 8386987 ECH